RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 FDCSPQ8NFU4 85 aa12.49□□□□□ -0.41
PRKN-204ENST00000366896 OR5A2Q8NGI9 324 aa12.49□□□□□ -0.41
PRKN-204ENST00000366896 APOBEC3DQ96AK3 386 aaPredicted RBP12.49□□□□□ -0.41
PRKN-204ENST00000366896 PYGO2Q9BRQ0 406 aa12.49□□□□□ -0.41
PRKN-204ENST00000366896 LRFN1Q9P244 771 aa12.49□□□□□ -0.41
PRKN-204ENST00000366896 RNF115Q9Y4L5 304 aa12.49□□□□□ -0.41
PRKN-204ENST00000366896 FRYQ5TBA9 3013 aa12.48□□□□□ -0.41
PRKN-204ENST00000366896 C3orf80F5H4A9 247 aa12.48□□□□□ -0.41
PRKN-204ENST00000366896 MRPL33O75394 65 aaKnown RBP12.48□□□□□ -0.41
PRKN-204ENST00000366896 FOXG1P55316 489 aaPredicted RBP12.48□□□□□ -0.41
PRKN-204ENST00000366896 ARF1P84077 181 aaKnown RBP12.48□□□□□ -0.41
PRKN-204ENST00000366896 ZNF787Q6DD87 383 aa12.48□□□□□ -0.41
PRKN-204ENST00000366896 MBD3L1Q8WWY6 194 aa12.48□□□□□ -0.41
PRKN-204ENST00000366896 TMEM68Q96MH6 324 aa12.48□□□□□ -0.41
PRKN-204ENST00000366896 RPRMQ9NS64 109 aa12.48□□□□□ -0.41
PRKN-204ENST00000366896 PLA2G3Q9NZ20 509 aa12.48□□□□□ -0.41
PRKN-204ENST00000366896 URB1O60287 2271 aaKnown RBP12.48□□□□□ -0.41
PRKN-204ENST00000366896 IGKV1-6A0A0C4DH72 117 aa12.48□□□□□ -0.41
PRKN-204ENST00000366896 ZNF503-AS2A6NEH8 195 aa12.48□□□□□ -0.41
PRKN-204ENST00000366896 CEACAM4O75871 244 aa12.48□□□□□ -0.41
PRKN-204ENST00000366896 HLA-HP01893 362 aa12.48□□□□□ -0.41
PRKN-204ENST00000366896 APLNRP35414 380 aa12.48□□□□□ -0.41
PRKN-204ENST00000366896 SLC10A1Q14973 349 aa12.48□□□□□ -0.41
PRKN-204ENST00000366896 C17orf78Q8N4C9 275 aa12.48□□□□□ -0.41
PRKN-204ENST00000366896 OR14J1Q9UGF5 321 aa12.48□□□□□ -0.41
PRKN-204ENST00000366896 BOKQ9UMX3 212 aaPredicted RBP12.48□□□□□ -0.41
PRKN-204ENST00000366896 RAXQ9Y2V3 346 aa12.48□□□□□ -0.41
PRKN-204ENST00000366896 NCOR2Q9Y618 2525 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 C1QTNF9BB2RNN3 333 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 TNFSF12O43508 249 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 NEURL1O76050 574 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 PFN1P07737 140 aaKnown RBP12.47□□□□□ -0.41
PRKN-204ENST00000366896 C1QTNF9P0C862 333 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 S100GP29377 79 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 SRYQ05066 204 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 MTCH1Q9NZJ7 389 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 TNRC6AQ8NDV7 1962 aaKnown RBP12.47□□□□□ -0.41
PRKN-204ENST00000366896 A0A1B0GWJ7 208 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 C5orf49A4QMS7 147 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 LRP5LA4QPB2 252 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 TRAPPC2LH3BP13 241 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 EREGO14944 169 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 IFNA5P01569 189 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 ZNF726P1Q15940 193 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 SPINK14Q6IE38 97 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 PCSK4Q6UW60 755 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 HIST1H2AAQ96QV6 131 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 CCL28Q9NRJ3 127 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 TAAR3PQ9P1P4 343 aa12.47□□□□□ -0.41
PRKN-204ENST00000366896 NPIPB11E5RHQ5 1161 aa12.46□□□□□ -0.41
PRKN-204ENST00000366896 CD55P08174 381 aa12.46□□□□□ -0.41
PRKN-204ENST00000366896 CELA3AP09093 270 aa12.46□□□□□ -0.41
PRKN-204ENST00000366896 F2RP25116 425 aa12.46□□□□□ -0.41
PRKN-204ENST00000366896 PDLIM4P50479 330 aa12.46□□□□□ -0.41
PRKN-204ENST00000366896 OR1C1Q15619 314 aa12.46□□□□□ -0.41
PRKN-204ENST00000366896 ACSF3Q4G176 576 aaPredicted RBP12.46□□□□□ -0.41
PRKN-204ENST00000366896 WDR25Q64LD2 544 aaPredicted RBP12.46□□□□□ -0.41
PRKN-204ENST00000366896 MRPL21Q7Z2W9 205 aaKnown RBP12.46□□□□□ -0.41
PRKN-204ENST00000366896 TGIF2LYQ8IUE0 185 aa12.46□□□□□ -0.41
PRKN-204ENST00000366896 PRRG4Q9BZD6 226 aa12.46□□□□□ -0.41
PRKN-204ENST00000366896 VAX2Q9UIW0 290 aa12.46□□□□□ -0.41
PRKN-204ENST00000366896 FREM1Q5H8C1 2179 aa12.46□□□□□ -0.41
PRKN-204ENST00000366896 XKRY2A2RUG3 117 aa12.46□□□□□ -0.42
PRKN-204ENST00000366896 ZNF705GA8MUZ8 300 aaPredicted RBP12.46□□□□□ -0.42
PRKN-204ENST00000366896 K7ENP7 123 aa12.46□□□□□ -0.42
PRKN-204ENST00000366896 SYNGR1O43759 233 aa12.46□□□□□ -0.42
PRKN-204ENST00000366896 PGLYRP1O75594 196 aaPredicted RBP12.46□□□□□ -0.42
PRKN-204ENST00000366896 SLC25A24Q6NUK1 477 aa12.46□□□□□ -0.42
PRKN-204ENST00000366896 INO80CQ6PI98 192 aaPredicted RBP12.46□□□□□ -0.42
PRKN-204ENST00000366896 LCN15Q6UWW0 184 aa12.46□□□□□ -0.42
PRKN-204ENST00000366896 NEK7Q8TDX7 302 aa12.46□□□□□ -0.42
PRKN-204ENST00000366896 RAB40CQ96S21 281 aa12.46□□□□□ -0.42
PRKN-204ENST00000366896 VSIRQ9H7M9 311 aa12.46□□□□□ -0.42
PRKN-204ENST00000366896 GAB2Q9UQC2 676 aa12.46□□□□□ -0.42
PRKN-204ENST00000366896 ARR3P36575 388 aa12.45□□□□□ -0.42
PRKN-204ENST00000366896 IGFL2Q6UWQ7 119 aa12.45□□□□□ -0.42
PRKN-204ENST00000366896 SSX7Q7RTT5 188 aa12.45□□□□□ -0.42
PRKN-204ENST00000366896 ZNF295-AS1Q8N0V1 137 aa12.45□□□□□ -0.42
PRKN-204ENST00000366896 MRPL30Q8TCC3 161 aaKnown RBP12.45□□□□□ -0.42
PRKN-204ENST00000366896 ACY3Q96HD9 319 aa12.45□□□□□ -0.42
PRKN-204ENST00000366896 ZNF488Q96MN9 340 aa12.45□□□□□ -0.42
PRKN-204ENST00000366896 RSG1Q9BU20 258 aa12.45□□□□□ -0.42
PRKN-204ENST00000366896 DCAF16Q9NXF7 216 aa12.45□□□□□ -0.42
PRKN-204ENST00000366896 NGFP01138 241 aa12.45□□□□□ -0.42
PRKN-204ENST00000366896 CHD3Q12873 2000 aaKnown RBP12.45□□□□□ -0.42
PRKN-204ENST00000366896 ZNF324BQ6AW86 544 aaPredicted RBP12.45□□□□□ -0.42
PRKN-204ENST00000366896 C20orf204Q6ZNR8 217 aa12.45□□□□□ -0.42
PRKN-204ENST00000366896 C16orf82Q7Z2V1 217 aa12.45□□□□□ -0.42
PRKN-204ENST00000366896 MRGPRGQ86SM5 289 aa12.45□□□□□ -0.42
PRKN-204ENST00000366896 MDS2Q8NDY4 140 aa12.45□□□□□ -0.42
PRKN-204ENST00000366896 AGMATQ9BSE5 352 aa12.45□□□□□ -0.42
PRKN-204ENST00000366896 NAT8Q9UHE5 227 aa12.45□□□□□ -0.42
PRKN-204ENST00000366896 RNF150Q9ULK6 438 aa12.45□□□□□ -0.42
PRKN-204ENST00000366896 OR2W1Q9Y3N9 320 aa12.45□□□□□ -0.42
PRKN-204ENST00000366896 MPC1Q9Y5U8 109 aa12.45□□□□□ -0.42
PRKN-204ENST00000366896 LOC400499M0QZD8 3231 aa12.44□□□□□ -0.42
PRKN-204ENST00000366896 A0A0G2JRQ6 117 aa12.44□□□□□ -0.42
PRKN-204ENST00000366896 OR5B21A6NL26 309 aa12.44□□□□□ -0.42
PRKN-204ENST00000366896 KIAA1324LA8MWY0 1029 aaPredicted RBP12.44□□□□□ -0.42
PRKN-204ENST00000366896 LHX2P50458 406 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms