RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 TCFL5Q9UL49 500 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 SELEP16581 610 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 BMPERQ8N8U9 685 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 OR52L2PQ8NGH6 319 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 R3HDM4Q96D70 268 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 TM2D1Q9BX74 207 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 WNT5BQ9H1J7 359 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 HS3ST3B1Q9Y662 390 aa11.94□□□□□ -0.5
COL6A1-201ENST00000361866 LRRK1Q38SD2 2015 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 C20orf202A1L168 122 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 SNURFLB1AK76 121 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 TCF21O43680 179 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 HIST1H2BKO60814 126 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 HIST1H2BJP06899 126 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 HIST1H2BOP23527 126 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 HIST1H2BBP33778 126 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 HIST1H2BDP58876 126 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 HIST1H2BCP62807 126 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 PAX5Q02548 391 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 DMWDQ09019 674 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 HIST2H2BEQ16778 126 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 TMEM183BQ1AE95 376 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.93□□□□□ -0.5
COL6A1-201ENST00000361866 ZNF826PQ6ZT77 177 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 LHFPL1Q86WI0 220 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 Q8IYB0 196 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 HIST1H2BHQ93079 126 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 SLC35E1Q96K37 410 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 HSD17B10Q99714 261 aaKnown RBP11.93□□□□□ -0.5
COL6A1-201ENST00000361866 HIST1H2BNQ99877 126 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 HIST1H2BMQ99879 126 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 HEATR1Q9H583 2144 aaKnown RBP11.93□□□□□ -0.5
COL6A1-201ENST00000361866 A0A1W2PR77 199 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 HOXA6P31267 233 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 GNG4P50150 75 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 MST1LQ2TV78 715 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 OR4C5Q8NGB2 326 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 PARLQ9H300 379 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 TRGV5A0A0B4J1U4 118 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 IGKV1D-13A0A0B4J2D9 117 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 J3QT63 122 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 TOX3O15405 576 aaPredicted RBP11.93□□□□□ -0.5
COL6A1-201ENST00000361866 CXCL1P09341 107 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 IGKV1-13P0DP09 117 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 CEACAM21Q3KPI0 293 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 ZNF552Q9H707 407 aaPredicted RBP11.93□□□□□ -0.5
COL6A1-201ENST00000361866 PLCE1Q9P212 2302 aa11.93□□□□□ -0.5
COL6A1-201ENST00000361866 TAS2R45P59539 299 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 ANAPC16Q96DE5 110 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 MANBALQ9NQG1 85 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 DLL3Q9NYJ7 618 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 INTS1Q8N201 2190 aaKnown RBP11.92□□□□□ -0.5
COL6A1-201ENST00000361866 CACNA1BQ00975 2339 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 LOC102724200A0A096LPH7 203 aaPredicted RBP11.92□□□□□ -0.5
COL6A1-201ENST00000361866 GALR2O43603 387 aaPredicted RBP11.92□□□□□ -0.5
COL6A1-201ENST00000361866 NDUFA2O43678 99 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 HAND1O96004 215 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 FAM89BQ8N5H3 189 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 PCED1AQ9H1Q7 454 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 RNF122Q9H9V4 155 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 TANC1Q9C0D5 1861 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 DBX1A6NMT0 343 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 SLC31A2O15432 143 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 HRASP01112 189 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 RFPL3SP0C7P2 107 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 ATP6V1FQ16864 119 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 LRRC29Q8WV35 223 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 CYYR1Q96J86 154 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 CLDN16Q9Y5I7 305 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 DENND4CQ5VZ89 1909 aa11.92□□□□□ -0.5
COL6A1-201ENST00000361866 RRP8O43159 456 aaKnown RBP11.91□□□□□ -0.5
COL6A1-201ENST00000361866 ZG16O60844 167 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 CCKARP32238 428 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 PSG5Q15238 335 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 ZNF506Q5JVG8 444 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 RNASEKQ6P5S7 137 aaKnown RBP11.91□□□□□ -0.5
COL6A1-201ENST00000361866 HSPB9Q9BQS6 159 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 FBLN5Q9UBX5 448 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 PYY3Q5JQD4 70 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 Q6ZN92 141 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 OR5AU1Q8NGC0 362 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 OR1L1Q8NH94 360 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 DDA1Q9BW61 102 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 LOC102723971A0A1B0GUV8 181 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 CLPSP04118 112 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 ARL3P36405 182 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 MEOX1P50221 254 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 KIAA1644Q3SXP7 199 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 TUBA4BQ9H853 241 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 NOTCH3Q9UM47 2321 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 LINC01387J3KSC0 135 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 K7N7A8 449 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 M0R1B8 84 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 CA11O75493 328 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 AGFG2O95081 481 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 SLC25A40Q8TBP6 338 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 SRD5A3Q9H8P0 318 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 ZNF835Q9Y2P0 537 aa11.91□□□□□ -0.5
COL6A1-201ENST00000361866 CHCHD2Q9Y6H1 151 aaPredicted RBP11.91□□□□□ -0.5
COL6A1-201ENST00000361866 TMEM265A0A087WTH1 108 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms