RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 MAFAQ8NHW3 353 aaPredicted RBP11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 C16orf92Q96LL3 132 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 C6orf106Q9H6K1 298 aaPredicted RBP11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 LDLRAD4O15165 306 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 LGALS3P17931 250 aaKnown RBP11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 LYZL2Q7Z4W2 148 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 TMEM101Q96IK0 257 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 AQP10Q96PS8 301 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 A0A0B4J2E0 115 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 A0A1B0GX12 115 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 TNFSF14O43557 240 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 PMELP40967 661 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 TMEM30BQ3MIR4 351 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 UNQ9370/PRO34162Q6UXP9 181 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 HDHD3Q9BSH5 251 aaPredicted RBP11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 LOC105371267A0A1B0GV96 52 aa11.58□□□□□ -0.55
SRGAP3-201ENST00000360413 TCRBV5S1A1TA0A578 114 aa11.58□□□□□ -0.55
SRGAP3-201ENST00000360413 SLC25A20O43772 301 aa11.58□□□□□ -0.55
SRGAP3-201ENST00000360413 RBM11P57052 281 aaKnown RBP11.58□□□□□ -0.55
SRGAP3-201ENST00000360413 BEND2Q8NDZ0 799 aa11.58□□□□□ -0.55
SRGAP3-201ENST00000360413 OR4X1Q8NH49 305 aa11.58□□□□□ -0.55
SRGAP3-201ENST00000360413 TREM2Q9NZC2 230 aa11.58□□□□□ -0.55
SRGAP3-201ENST00000360413 MEX3AA1L020 520 aaKnown RBP11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 WNT5AP41221 380 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 RIPPLY3P57055 190 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 ACVR1Q04771 509 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 ZNF79Q15937 498 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 GAPTQ8N292 157 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 SCNM1Q9BWG6 230 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 PLCH1Q4KWH8 1693 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 PSG9Q00887 426 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 ANKRD33Q7Z3H0 272 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 OR10D3Q8NH80 312 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 TLNRD1Q9H1K6 362 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 BCORQ6W2J9 1755 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 A0A1B0GTL3 188 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 NDUFB4O95168 129 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 PRR35P0CG20 571 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 FMODQ06828 376 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 TCF24Q7RTU0 167 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 PRF1P14222 555 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 PLAURQ03405 335 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 KLHDC9Q8NEP7 349 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 PTPMT1Q8WUK0 201 aaPredicted RBP11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 C8orf44Q96CB5 159 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 TRGC1P0CF51 173 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 MRGPRFQ96AM1 343 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 NDUFA2O43678 99 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 HSPB1P04792 205 aaKnown RBP11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 SAPCD1Q5SSQ6 148 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 ROS1P08922 2347 aa11.58□□□□□ -0.56
SRGAP3-201ENST00000360413 C7orf71A4D174 169 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 IGHV3-13P01766 116 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 IGHV3-7P01780 117 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 OR52M1Q8NGK5 317 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 HYAL3O43820 417 aaPredicted RBP11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 TMEM50BP56557 158 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 MS4A4AQ96JQ5 239 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 RARRES2Q99969 163 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 TRAV30A0A087WSZ9 112 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 OR10AG1Q8NH19 301 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 TSPAN32Q96QS1 320 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 JKAMPQ9P055 326 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 CACNA1HO95180 2353 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 A0A0A6YYD5 115 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 A1L4Q6 167 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 K7N7A8 449 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 TYMSP04818 313 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 FOXF1Q12946 379 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 ZNF660Q6AZW8 331 aaPredicted RBP11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 MRGPRDQ8TDS7 321 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 CITED2Q99967 270 aaPredicted RBP11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 MMP25Q9NPA2 562 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 COL11A1P12107 1806 aaPredicted RBP11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 A0A1W2PQM1 296 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 ACER2Q5QJU3 275 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 CD300LDQ6UXZ3 194 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 SF3B6Q9Y3B4 125 aaKnown RBP11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 ZNF646O15015 1829 aaPredicted RBP11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 SYNGR1O43759 233 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 PRDX2P32119 198 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 ANKRD37Q7Z713 158 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 MDP1Q86V88 176 aa11.57□□□□□ -0.56
SRGAP3-201ENST00000360413 C9orf172C9J069 976 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 MEF2BQ02080 365 aaPredicted RBP11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 FAM106AQ4KMX7 169 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 DPRXA6NFQ7 191 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 FCARP24071 287 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 SRIP30626 198 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 P2RX4Q99571 388 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 RNF7Q9UBF6 113 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 SOCS1O15524 211 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 PPYP01298 95 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 MAP1LC3AQ9H492 121 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 PCOLCE2Q9UKZ9 415 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 NPIPB8E9PQR5 432 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 NPIPB9F8W1W9 429 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 NPIPB7O75200 414 aa11.56□□□□□ -0.56
SRGAP3-201ENST00000360413 GCSAMLQ5JQS6 135 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms