RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 KIAA0040Q15053 153 aa9.73□□□□□ -0.85
COL11A1-202ENST00000358392 C12orf54Q6X4T0 127 aa9.73□□□□□ -0.85
COL11A1-202ENST00000358392 SRSF12Q8WXF0 261 aaKnown RBP9.73□□□□□ -0.85
COL11A1-202ENST00000358392 ST6GALNAC6Q969X2 333 aa9.73□□□□□ -0.85
COL11A1-202ENST00000358392 HEXA-AS1Q9H8Q6 139 aa9.73□□□□□ -0.85
COL11A1-202ENST00000358392 UQCR10Q9UDW1 63 aa9.73□□□□□ -0.85
COL11A1-202ENST00000358392 LINC00862A6NCI5 91 aa9.73□□□□□ -0.85
COL11A1-202ENST00000358392 SMAGPQ0VAQ4 97 aa9.73□□□□□ -0.85
COL11A1-202ENST00000358392 TRIP6Q15654 476 aaKnown RBP9.73□□□□□ -0.85
COL11A1-202ENST00000358392 GPR82Q96P67 336 aa9.73□□□□□ -0.85
COL11A1-202ENST00000358392 CHODLQ9H9P2 273 aa9.73□□□□□ -0.85
COL11A1-202ENST00000358392 SCN2AQ99250 2005 aa9.73□□□□□ -0.85
COL11A1-202ENST00000358392 IL4P05112 153 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 ARL14EPLP0DKL9 152 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 GZMHP20718 246 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 CCL8P80075 99 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 MRPL16Q9NX20 251 aaKnown RBP9.72□□□□□ -0.85
COL11A1-202ENST00000358392 CCL3P10147 92 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 IL11P20809 199 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 FOXL2P58012 376 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 RAC3P60763 192 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 RPL31P62899 125 aaKnown RBP9.72□□□□□ -0.85
COL11A1-202ENST00000358392 GGTLC2Q14390 218 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 MIC13Q5XKP0 118 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 DDB2Q92466 427 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 C18orf15Q96N68 181 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 CITED2Q99967 270 aaPredicted RBP9.72□□□□□ -0.85
COL11A1-202ENST00000358392 COL16A1Q07092 1604 aaPredicted RBP9.72□□□□□ -0.85
COL11A1-202ENST00000358392 VSIG8P0DPA2 414 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 COL9A1P20849 921 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 ZNF273Q14593 569 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 LEAP2Q969E1 77 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 RASL10BQ96S79 203 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 GEMIN7Q9H840 131 aaKnown RBP9.72□□□□□ -0.85
COL11A1-202ENST00000358392 SLC25A34Q6PIV7 304 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 TMEM92Q6UXU6 159 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 TNFSF18Q9UNG2 199 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 KLHDC2Q9Y2U9 406 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 DDX60LQ5H9U9 1706 aaKnown RBP9.72□□□□□ -0.85
COL11A1-202ENST00000358392 TOPAZ1Q8N9V7 1692 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 HOXC4P09017 264 aaPredicted RBP9.72□□□□□ -0.85
COL11A1-202ENST00000358392 SMIM13P0DJ93 91 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 SURF2Q15527 256 aaPredicted RBP9.72□□□□□ -0.85
COL11A1-202ENST00000358392 LY6EQ16553 131 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 RFLNBQ8N5W9 214 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 OR2Y1Q8NGV0 311 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 LHX9Q9NQ69 397 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 IGHV3-66A0A0C4DH42 116 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 H0YL77 283 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 PLA2G10O15496 165 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 IGHV3-23P01764 117 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 ZNF324BQ6AW86 544 aaPredicted RBP9.72□□□□□ -0.85
COL11A1-202ENST00000358392 NPVFQ9HCQ7 196 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 CDC42EP3Q9UKI2 254 aa9.72□□□□□ -0.85
COL11A1-202ENST00000358392 DDTP30046 118 aa9.71□□□□□ -0.85
COL11A1-202ENST00000358392 H1FOOQ8IZA3 346 aaPredicted RBP9.71□□□□□ -0.85
COL11A1-202ENST00000358392 K7N7A8 449 aa9.71□□□□□ -0.85
COL11A1-202ENST00000358392 SCTP09683 121 aa9.71□□□□□ -0.85
COL11A1-202ENST00000358392 PRDX2P32119 198 aa9.71□□□□□ -0.85
COL11A1-202ENST00000358392 SUMO2P61956 95 aaKnown RBP9.71□□□□□ -0.85
COL11A1-202ENST00000358392 ZPLD1Q8TCW7 415 aa9.71□□□□□ -0.85
COL11A1-202ENST00000358392 TRAV8-6A0A0B4J262 113 aa9.71□□□□□ -0.85
COL11A1-202ENST00000358392 JOSD1Q15040 202 aaPredicted RBP9.71□□□□□ -0.85
COL11A1-202ENST00000358392 SFRP2Q96HF1 295 aa9.71□□□□□ -0.85
COL11A1-202ENST00000358392 WNT10AQ9GZT5 417 aa9.71□□□□□ -0.85
COL11A1-202ENST00000358392 MUC21A0A0G2JKD1 596 aa9.71□□□□□ -0.86
COL11A1-202ENST00000358392 MUC21A0A140T8X8 626 aa9.71□□□□□ -0.86
COL11A1-202ENST00000358392 FOLR2P14207 255 aa9.71□□□□□ -0.86
COL11A1-202ENST00000358392 CTAG1AP78358 180 aa9.71□□□□□ -0.86
COL11A1-202ENST00000358392 MUC21Q5SSG8 566 aa9.71□□□□□ -0.86
COL11A1-202ENST00000358392 DUX5Q96PT3 197 aa9.71□□□□□ -0.86
COL11A1-202ENST00000358392 NPFFO15130 113 aa9.71□□□□□ -0.86
COL11A1-202ENST00000358392 TYMSP04818 313 aa9.71□□□□□ -0.86
COL11A1-202ENST00000358392 CD300LDQ6UXZ3 194 aa9.71□□□□□ -0.86
COL11A1-202ENST00000358392 ATG4DQ86TL0 474 aaPredicted RBP9.71□□□□□ -0.86
COL11A1-202ENST00000358392 VKORC1L1Q8N0U8 176 aa9.71□□□□□ -0.86
COL11A1-202ENST00000358392 ZNF714Q96N38 554 aa9.71□□□□□ -0.86
COL11A1-202ENST00000358392 IGHV3OR16-10A0A075B7F0 116 aa9.71□□□□□ -0.86
COL11A1-202ENST00000358392 A0A0U1RQV5 110 aa9.71□□□□□ -0.86
COL11A1-202ENST00000358392 DMRTA1Q5VZB9 504 aa9.71□□□□□ -0.86
COL11A1-202ENST00000358392 IGKV3D-20A0A0C4DH25 116 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 SEC11BP0C7V7 166 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 CCL4P13236 92 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 RPL34P49207 117 aaKnown RBP9.7□□□□□ -0.86
COL11A1-202ENST00000358392 TBX21Q9UL17 535 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 WIPI2Q9Y4P8 454 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 TMEM56-RWDD3S4R434 201 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 MDC1Q14676 2089 aaKnown RBP9.7□□□□□ -0.86
COL11A1-202ENST00000358392 SCN8AQ9UQD0 1980 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 TMEM210A6NLX4 147 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 ZNF815PA8K554 130 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 HKR1P10072 659 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 ZAR1Q86SH2 424 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 GDF9O60383 454 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 EPHA8P29322 1005 aaPredicted RBP9.7□□□□□ -0.86
COL11A1-202ENST00000358392 ZNF79Q15937 498 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 FAM169BQ8N8A8 192 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 OR52M1Q8NGK5 317 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 NRIP2Q9BQI9 281 aa9.7□□□□□ -0.86
COL11A1-202ENST00000358392 RBM38Q9H0Z9 239 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms