RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 IGKV1D-33P01593 117 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 IGKV1-33P01594 117 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 CELA2AP08217 269 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 PSG2P11465 335 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 POLR2IP36954 125 aaKnown RBP5.04□□□□□ -1.6
BRCA1-203ENST00000357654 PNRC1Q12796 327 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-203ENST00000357654 ZP4Q12836 540 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 TCF23Q7RTU1 214 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 TMEM256Q8N2U0 113 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 NANOGP1Q8N7R0 232 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 OR4D5Q8NGN0 318 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 LINC00527Q9UJ94 153 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 ANAPC10Q9UM13 185 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 LILRA5A6NI73 299 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 M0R143 59 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 MPV17LQ2QL34 196 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 PRSS54Q6PEW0 395 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 VN1R17PQ8TDU5 208 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 SCNM1Q9BWG6 230 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 JKAMPQ9P055 326 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 SERGEFQ9UGK8 458 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 CTSVO60911 334 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 NDUFA3O95167 84 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 FAM53BQ14153 422 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 ISXQ2M1V0 245 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 CYB5R2Q6BCY4 276 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 Q6ZSR9 355 aa5.04□□□□□ -1.6
BRCA1-203ENST00000357654 PSMG3Q9BT73 122 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-203ENST00000357654 ATP5LO75964 103 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 HOXB3P14651 431 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-203ENST00000357654 GPR183P32249 361 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 TEPPQ6URK8 271 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 SFTA2Q6UW10 78 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 RSPO2Q6UXX9 243 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-203ENST00000357654 OR10AG1Q8NH19 301 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 SRSF12Q8WXF0 261 aaKnown RBP5.03□□□□□ -1.6
BRCA1-203ENST00000357654 SPSB1Q96BD6 273 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 ZNF625Q96I27 306 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-203ENST00000357654 RAB40CQ96S21 281 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 CCL28Q9NRJ3 127 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 CD7P09564 240 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 TNFSF10P50591 281 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 HIST1H4AP62805 103 aaKnown RBP5.03□□□□□ -1.6
BRCA1-203ENST00000357654 MAPK1IP1LQ8NDC0 245 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 PP6455Q8WZ26 134 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 SCARF2Q96GP6 870 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-203ENST00000357654 MS4A3Q96HJ5 214 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 LYRM2Q9NU23 88 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-203ENST00000357654 FMN2Q9NZ56 1722 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 MYO9BQ13459 2157 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 PRR35P0CG20 571 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 GPX2P18283 190 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 CFHR3Q02985 330 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 OR2Y1Q8NGV0 311 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 LSM10Q969L4 123 aaKnown RBP5.03□□□□□ -1.6
BRCA1-203ENST00000357654 PRSS22Q9GZN4 317 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 CXCL16Q9H2A7 254 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 CALYQ9NYX4 217 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 ZNF107Q9UII5 783 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-203ENST00000357654 PAM16Q9Y3D7 125 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 OR4C45A6NMZ5 311 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 E9PQ18 207 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 CBLN1P23435 193 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 CLRN3Q8NCR9 226 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 UBE2E2Q96LR5 201 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 NAA50Q9GZZ1 169 aaKnown RBP5.03□□□□□ -1.6
BRCA1-203ENST00000357654 TREX1Q9NSU2 369 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 OR10J1P30954 320 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 ASIPP42127 132 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 ZNF585BQ52M93 769 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 ABLIM2Q6H8Q1 611 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 INO80CQ6PI98 192 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-203ENST00000357654 TP53I13Q8NBR0 393 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-203ENST00000357654 TMEM167AQ8TBQ9 72 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 DKK4Q9UBT3 224 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 MPC1Q9Y5U8 109 aa5.03□□□□□ -1.6
BRCA1-203ENST00000357654 TYROBPO43914 113 aa5.02□□□□□ -1.61
BRCA1-203ENST00000357654 ASAH2BP0C7U1 165 aa5.02□□□□□ -1.61
BRCA1-203ENST00000357654 GZMHP20718 246 aa5.02□□□□□ -1.61
BRCA1-203ENST00000357654 GNLYP22749 145 aa5.02□□□□□ -1.61
BRCA1-203ENST00000357654 CD24P25063 80 aa5.02□□□□□ -1.61
BRCA1-203ENST00000357654 FBXW9Q5XUX1 488 aa5.02□□□□□ -1.61
BRCA1-203ENST00000357654 VKORC1L1Q8N0U8 176 aa5.02□□□□□ -1.61
BRCA1-203ENST00000357654 SP7Q8TDD2 431 aaPredicted RBP5.02□□□□□ -1.61
BRCA1-203ENST00000357654 RNF122Q9H9V4 155 aa5.02□□□□□ -1.61
BRCA1-203ENST00000357654 TNFSF18Q9UNG2 199 aa5.02□□□□□ -1.61
BRCA1-203ENST00000357654 URB1O60287 2271 aaKnown RBP5.02□□□□□ -1.61
BRCA1-203ENST00000357654 MAP2P11137 1827 aaKnown RBP5.02□□□□□ -1.61
BRCA1-203ENST00000357654 TRAV8-6A0A0B4J262 113 aa5.02□□□□□ -1.61
BRCA1-203ENST00000357654 C19orf67A6NJJ6 358 aa5.02□□□□□ -1.61
BRCA1-203ENST00000357654 MOSP00540 346 aa5.02□□□□□ -1.61
BRCA1-203ENST00000357654 SEC11BP0C7V7 166 aa5.02□□□□□ -1.61
BRCA1-203ENST00000357654 GGTA1PQ4G0N0 100 aa5.02□□□□□ -1.61
BRCA1-203ENST00000357654 ZNF818PQ6ZRF7 136 aa5.02□□□□□ -1.61
BRCA1-203ENST00000357654 RASL10BQ96S79 203 aa5.02□□□□□ -1.61
BRCA1-203ENST00000357654 FUT9Q9Y231 359 aa5.02□□□□□ -1.61
BRCA1-203ENST00000357654 PIK3C2AO00443 1686 aa5.02□□□□□ -1.61
BRCA1-203ENST00000357654 ELOA3CA0A087WX78 387 aaPredicted RBP5.02□□□□□ -1.61
BRCA1-203ENST00000357654 KBTBD11-OT1A0A1B0GTJ5 212 aa5.02□□□□□ -1.61
BRCA1-203ENST00000357654 NPIPB11E5RHQ5 1161 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms