RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 YPEL2Q96QA6 119 aa14.91□□□□□ -0.02
SMARCD3-202ENST00000356800 SSBP3Q9BWW4 388 aaPredicted RBP14.91□□□□□ -0.02
SMARCD3-202ENST00000356800 CSMD2Q7Z408 3487 aa14.91□□□□□ -0.02
SMARCD3-202ENST00000356800 PGLYRP1O75594 196 aaPredicted RBP14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 RGS11O94810 467 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 IGHV3-7P01780 117 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 OR5AC1P0C628 307 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 HEPN1Q6WQI6 88 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 TBC1D26Q86UD7 250 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 C11orf42Q8N5U0 333 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 LY6G5BQ8NDX9 201 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 HYLS1Q96M11 299 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 GPHA2Q96T91 129 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 RBM7Q9Y580 266 aaKnown RBP14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 VPS13CQ709C8 3753 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 C3orf85A0A1B0GTC6 90 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 KIAA1324LA8MWY0 1029 aaPredicted RBP14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 G3V3Q6 166 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 NFYBP25208 207 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 ZNF134P52741 427 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 CLEC2AQ6UVW9 174 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 ZBTB34Q8NCN2 500 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 OR10A7Q8NGE5 316 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 OR52M1Q8NGK5 317 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 GLYATL2Q8WU03 294 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 C5orf30Q96GV9 206 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 AGMATQ9BSE5 352 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 PIMREGQ9BSJ6 248 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 PRR13Q9NZ81 148 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 RNF150Q9ULK6 438 aa14.9□□□□□ -0.02
SMARCD3-202ENST00000356800 FASNP49327 2511 aaKnown RBP14.89□□□□□ -0.03
SMARCD3-202ENST00000356800 IGHV4-30-2A0A087WSY4 118 aa14.89□□□□□ -0.03
SMARCD3-202ENST00000356800 PPIAL4CA0A0B4J2A2 164 aa14.89□□□□□ -0.03
SMARCD3-202ENST00000356800 NDUFS8O00217 210 aa14.89□□□□□ -0.03
SMARCD3-202ENST00000356800 SLC31A2O15432 143 aa14.89□□□□□ -0.03
SMARCD3-202ENST00000356800 ST8SIA5O15466 376 aa14.89□□□□□ -0.03
SMARCD3-202ENST00000356800 B3GALNT1O75752 331 aa14.89□□□□□ -0.03
SMARCD3-202ENST00000356800 PPIAL4GP0DN37 164 aa14.89□□□□□ -0.03
SMARCD3-202ENST00000356800 ZFP36P26651 326 aaKnown RBP14.89□□□□□ -0.03
SMARCD3-202ENST00000356800 ESCO2Q56NI9 601 aa14.89□□□□□ -0.03
SMARCD3-202ENST00000356800 LIAT1Q6ZQX7 453 aa14.89□□□□□ -0.03
SMARCD3-202ENST00000356800 ZNF645Q8N7E2 425 aa14.89□□□□□ -0.03
SMARCD3-202ENST00000356800 ZNF439Q8NDP4 499 aa14.89□□□□□ -0.03
SMARCD3-202ENST00000356800 EDARADDQ8WWZ3 215 aa14.89□□□□□ -0.03
SMARCD3-202ENST00000356800 MSI2Q96DH6 328 aaKnown RBP14.89□□□□□ -0.03
SMARCD3-202ENST00000356800 TP53RKQ96S44 253 aa14.89□□□□□ -0.03
SMARCD3-202ENST00000356800 PSG11Q9UQ72 335 aa14.89□□□□□ -0.03
SMARCD3-202ENST00000356800 MED13LQ71F56 2210 aa14.89□□□□□ -0.03
SMARCD3-202ENST00000356800 C17orf98A8MV24 154 aa14.88□□□□□ -0.03
SMARCD3-202ENST00000356800 CCSO14618 274 aa14.88□□□□□ -0.03
SMARCD3-202ENST00000356800 ITGB1BP1O14713 200 aa14.88□□□□□ -0.03
SMARCD3-202ENST00000356800 DNASE1P24855 282 aa14.88□□□□□ -0.03
SMARCD3-202ENST00000356800 SRPXP78539 464 aa14.88□□□□□ -0.03
SMARCD3-202ENST00000356800 SP6Q3SY56 376 aa14.88□□□□□ -0.03
SMARCD3-202ENST00000356800 DRAM1Q8N682 238 aa14.88□□□□□ -0.03
SMARCD3-202ENST00000356800 WDR89Q96FK6 387 aaPredicted RBP14.88□□□□□ -0.03
SMARCD3-202ENST00000356800 TMEM222Q9H0R3 208 aa14.88□□□□□ -0.03
SMARCD3-202ENST00000356800 OR2D2Q9H210 308 aa14.88□□□□□ -0.03
SMARCD3-202ENST00000356800 KCNS2Q9ULS6 477 aa14.88□□□□□ -0.03
SMARCD3-202ENST00000356800 ABCA2Q9BZC7 2435 aa14.88□□□□□ -0.03
SMARCD3-202ENST00000356800 LOC105371242A0A075B767 164 aa14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 IGHV4-61A0A0C4DH41 118 aa14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 F2RP25116 425 aa14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 Q5BKY6 102 aa14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 CT45A1Q5HYN5 189 aa14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 GSG1LQ6UXU4 331 aa14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 LGI3Q8N145 548 aa14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 CT45A3Q8NHU0 189 aa14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 ABHD14BQ96IU4 210 aa14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 TMEM56Q96MV1 263 aa14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 PDCD10Q9BUL8 212 aa14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 TMEM56-RWDD3S4R434 201 aa14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 A0A1W2PPE3 182 aa14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 H0Y980 276 aa14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 TNFSF12O43508 249 aa14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 ADAP1O75689 374 aa14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 CYCSP99999 105 aaKnown RBP14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 DRAXINQ8NBI3 349 aaPredicted RBP14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 OR11H4Q8NGC9 324 aa14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 C18orf12Q96KH6 178 aa14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 IFI27L2Q9H2X8 130 aa14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 METTL8Q9H825 291 aaKnown RBP14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 BEX4Q9NWD9 120 aaPredicted RBP14.87□□□□□ -0.03
SMARCD3-202ENST00000356800 FAM25EA8MYX2 175 aa14.86□□□□□ -0.03
SMARCD3-202ENST00000356800 IGHV1-8P0DP01 117 aa14.86□□□□□ -0.03
SMARCD3-202ENST00000356800 UCP1P25874 307 aa14.86□□□□□ -0.03
SMARCD3-202ENST00000356800 EIF4EBP1Q13541 118 aaPredicted RBP14.86□□□□□ -0.03
SMARCD3-202ENST00000356800 ABHD14AQ9BUJ0 271 aa14.86□□□□□ -0.03
SMARCD3-202ENST00000356800 NMES1Q9C002 83 aa14.86□□□□□ -0.03
SMARCD3-202ENST00000356800 C5orf51A6NDU8 294 aa14.85□□□□□ -0.03
SMARCD3-202ENST00000356800 A8MXK9 166 aa14.85□□□□□ -0.03
SMARCD3-202ENST00000356800 PROP1O75360 226 aa14.85□□□□□ -0.03
SMARCD3-202ENST00000356800 CDS2O95674 445 aa14.85□□□□□ -0.03
SMARCD3-202ENST00000356800 LIPFP07098 398 aa14.85□□□□□ -0.03
SMARCD3-202ENST00000356800 GNG10P50151 68 aa14.85□□□□□ -0.03
SMARCD3-202ENST00000356800 DLX1P56177 255 aa14.85□□□□□ -0.03
SMARCD3-202ENST00000356800 DSCR9P59020 149 aa14.85□□□□□ -0.03
SMARCD3-202ENST00000356800 PAX2Q02962 417 aa14.85□□□□□ -0.03
SMARCD3-202ENST00000356800 FGL1Q08830 312 aa14.85□□□□□ -0.03
SMARCD3-202ENST00000356800 DEFB113Q30KQ7 82 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms