RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 NHSL1Q5SYE7 1610 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 TMSB15BA0A087X1C1 80 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 K7ERU9 68 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 ZNF205O95201 554 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 FABP2P12104 132 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 UBE2V2Q15819 145 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 NCMAPQ5T1S8 102 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 STPG1Q5TH74 334 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 ZNF501Q96CX3 271 aaPredicted RBP5.6□□□□□ -1.51
UPF2-201ENST00000356352 EID2BQ96D98 161 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 ALKBH7Q9BT30 221 aaPredicted RBP5.6□□□□□ -1.51
UPF2-201ENST00000356352 PRR13Q9NZ81 148 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 JPT1Q9UK76 154 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 PHLDA3Q9Y5J5 127 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 hCG_38984A0A1B0GV85 526 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 PTP4A3O75365 173 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 NUDT3O95989 172 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 IGF2P01344 180 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 HSPB1P04792 205 aaKnown RBP5.6□□□□□ -1.51
UPF2-201ENST00000356352 ASAH2BP0C7U1 165 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 LINC00869P0C866 280 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 REG1BP48304 166 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 PSG4Q00888 419 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.6□□□□□ -1.51
UPF2-201ENST00000356352 ZNF880Q6PDB4 577 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 OR8G5Q8NG78 346 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 TMEM186Q96B77 213 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 ST6GAL2Q96JF0 529 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 DUX5Q96PT3 197 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 TMEM222Q9H0R3 208 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 OPN3Q9H1Y3 402 aaPredicted RBP5.6□□□□□ -1.51
UPF2-201ENST00000356352 IL17BQ9UHF5 180 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 TUBD1Q9UJT1 453 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 ARAP2Q8WZ64 1704 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 TRBV9A0A0B4J1U6 114 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 OR2H2O95918 312 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 FGF5P12034 268 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 ANOS1P23352 680 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 SNRPD3P62318 126 aaKnown RBP5.6□□□□□ -1.51
UPF2-201ENST00000356352 COL5A1-AS1Q5SY13 56 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 C12orf54Q6X4T0 127 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 OR4B1Q8NGF8 309 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 RAXQ9Y2V3 346 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 LOC389332A0A1B0GUA5 103 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 MFAP2P55001 183 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 CX3CL1P78423 397 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 OR4D11Q8NGI4 311 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 OR1K1Q8NGR3 316 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 SP7Q8TDD2 431 aaPredicted RBP5.6□□□□□ -1.51
UPF2-201ENST00000356352 CISD1Q9NZ45 108 aaKnown RBP5.6□□□□□ -1.51
UPF2-201ENST00000356352 RNF115Q9Y4L5 304 aa5.6□□□□□ -1.51
UPF2-201ENST00000356352 TRAV8-7A0A075B6U6 113 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 A0A1W2PPC1 479 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 ZNF729A6NN14 1252 aaPredicted RBP5.59□□□□□ -1.51
UPF2-201ENST00000356352 FOXS1O43638 330 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 ISG15P05161 165 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 CXorf66Q5JRM2 361 aaPredicted RBP5.59□□□□□ -1.51
UPF2-201ENST00000356352 RNFT1Q5M7Z0 435 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 VN1R17PQ8TDU5 208 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 ZNF385AQ96PM9 386 aaKnown RBP5.59□□□□□ -1.51
UPF2-201ENST00000356352 SOSTQ9BQB4 213 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 NRIP2Q9BQI9 281 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 MIXL1Q9H2W2 232 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 HILPDAQ9Y5L2 63 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 TRBV5-3A0A0A0MS03 114 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 LMX1BO60663 402 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 FOXH1O75593 365 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 FTH1P19P0C7X4 201 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 DNLZQ5SXM8 178 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 DNM1P46Q6ZS02 220 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 ZNF383Q8NA42 475 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 FAM216AQ8WUB2 273 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 POM121Q96HA1 1249 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 SH3BGRL3Q9H299 93 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 RBKSQ9H477 322 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 IL36RNQ9UBH0 155 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 A0A0B4J293 547 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 UPK3AO75631 287 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 APELAP0DMC3 54 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 PRSS12P56730 875 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 CCL8P80075 99 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 C8orf82Q6P1X6 216 aaPredicted RBP5.59□□□□□ -1.51
UPF2-201ENST00000356352 TCF24Q7RTU0 167 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 OR11H7Q8NGC8 314 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 OR9G1Q8NH87 305 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 SGMS2Q8NHU3 365 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 TIMP4Q99727 224 aa5.59□□□□□ -1.51
UPF2-201ENST00000356352 A0A0J9YW62 118 aa5.59□□□□□ -1.52
UPF2-201ENST00000356352 H7C1H1 209 aa5.59□□□□□ -1.52
UPF2-201ENST00000356352 PEBP1P30086 187 aaKnown RBP5.59□□□□□ -1.52
UPF2-201ENST00000356352 DLX6P56179 175 aa5.59□□□□□ -1.52
UPF2-201ENST00000356352 NSUN5P2Q63ZY6 315 aa5.59□□□□□ -1.52
UPF2-201ENST00000356352 SLC16A13Q7RTY0 426 aa5.59□□□□□ -1.52
UPF2-201ENST00000356352 ITLN1Q8WWA0 313 aa5.59□□□□□ -1.52
UPF2-201ENST00000356352 GPR82Q96P67 336 aa5.59□□□□□ -1.52
UPF2-201ENST00000356352 HSF4Q9ULV5 492 aa5.59□□□□□ -1.52
UPF2-201ENST00000356352 IGHV3-21A0A0B4J1V1 117 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 PPIAL4CA0A0B4J2A2 164 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 A0A1W2PPE3 182 aa5.58□□□□□ -1.52
UPF2-201ENST00000356352 HRKO00198 91 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms