RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 PPIAL4DF5H284 164 aa21.31■■□□□ 1
CLK2-201ENST00000355560 F2RL2O00254 374 aa21.31■■□□□ 1
CLK2-201ENST00000355560 PPIAL4FP0DN26 164 aa21.31■■□□□ 1
CLK2-201ENST00000355560 ZNF585BQ52M93 769 aa21.31■■□□□ 1
CLK2-201ENST00000355560 MUC15Q8N387 334 aa21.31■■□□□ 1
CLK2-201ENST00000355560 RNASE11Q8TAA1 199 aaKnown RBP21.31■■□□□ 1
CLK2-201ENST00000355560 STOML3Q8TAV4 291 aa21.31■■□□□ 1
CLK2-201ENST00000355560 AGMATQ9BSE5 352 aa21.31■■□□□ 1
CLK2-201ENST00000355560 PPIAL4AQ9Y536 164 aa21.31■■□□□ 1
CLK2-201ENST00000355560 TRGV10A0A0A0MS01 117 aa21.3■■□□□ 1
CLK2-201ENST00000355560 NMBP08949 121 aa21.3■■□□□ 1
CLK2-201ENST00000355560 LOXL3P58215 753 aa21.3■■□□□ 1
CLK2-201ENST00000355560 EIF4EBP1Q13541 118 aaPredicted RBP21.3■■□□□ 1
CLK2-201ENST00000355560 MSMO1Q15800 293 aa21.3■■□□□ 1
CLK2-201ENST00000355560 MORN2Q502X0 79 aa21.3■■□□□ 1
CLK2-201ENST00000355560 BTNL3Q6UXE8 466 aa21.3■■□□□ 1
CLK2-201ENST00000355560 PLEKHA2Q9HB19 425 aa21.3■■□□□ 1
CLK2-201ENST00000355560 CGB3P0DN86 165 aa21.29■■□□□ 1
CLK2-201ENST00000355560 CGB7P0DN87 165 aa21.29■■□□□ 1
CLK2-201ENST00000355560 EPHA1P21709 976 aa21.29■■□□□ 1
CLK2-201ENST00000355560 ZNF672Q499Z4 452 aaPredicted RBP21.29■■□□□ 1
CLK2-201ENST00000355560 FGFRL1Q8N441 504 aa21.29■■□□□ 1
CLK2-201ENST00000355560 PHYHIPLQ96FC7 376 aa21.29■■□□□ 1
CLK2-201ENST00000355560 USF3Q68DE3 2245 aa21.29■■□□□ 1
CLK2-201ENST00000355560 YPEL1O60688 119 aa21.29■■□□□ 1
CLK2-201ENST00000355560 TPT1P13693 172 aaKnown RBP21.29■■□□□ 1
CLK2-201ENST00000355560 AKR1C2P52895 323 aa21.29■■□□□ 1
CLK2-201ENST00000355560 C17orf58Q2M2W7 97 aa21.29■■□□□ 1
CLK2-201ENST00000355560 FAM74A1Q5RGS3 127 aa21.29■■□□□ 1
CLK2-201ENST00000355560 TCF23Q7RTU1 214 aa21.29■■□□□ 1
CLK2-201ENST00000355560 DMBX1Q8NFW5 382 aa21.29■■□□□ 1
CLK2-201ENST00000355560 YPEL2Q96QA6 119 aa21.29■■□□□ 1
CLK2-201ENST00000355560 SDHAF2Q9NX18 166 aa21.29■■□□□ 1
CLK2-201ENST00000355560 HCFC1P51610 2035 aa21.28■■□□□ 1
CLK2-201ENST00000355560 UQCRFS1P47985 274 aa21.28■■□□□ 1
CLK2-201ENST00000355560 RPL30P62888 115 aaKnown RBP21.28■■□□□ 1
CLK2-201ENST00000355560 CATR1Q13166 79 aa21.28■■□□□ 1
CLK2-201ENST00000355560 SWI5Q1ZZU3 235 aa21.28■■□□□ 1
CLK2-201ENST00000355560 CXorf66Q5JRM2 361 aaPredicted RBP21.28■■□□□ 1
CLK2-201ENST00000355560 GPR146Q96CH1 333 aa21.28■■□□□ 1
CLK2-201ENST00000355560 KBTBD11-OT1A0A1B0GTJ5 212 aa21.28■■□□□ 1
CLK2-201ENST00000355560 LOXP28300 417 aaPredicted RBP21.28■■□□□ 1
CLK2-201ENST00000355560 POLR2GP62487 172 aaKnown RBP eCLIP21.28■■□□□ 1
CLK2-201ENST00000355560 Q3ZCU0 254 aa21.28■■□□□ 1
CLK2-201ENST00000355560 RAB9BQ9NP90 201 aa21.28■■□□□ 1
CLK2-201ENST00000355560 CLN8Q9UBY8 286 aa21.28■■□□□ 1
CLK2-201ENST00000355560 LEUTXA8MZ59 168 aa21.27■■□□□ 1
CLK2-201ENST00000355560 NXPH3O95157 252 aa21.27■■□□□ 1
CLK2-201ENST00000355560 NDUFB7P17568 137 aa21.27■■□□□ 1
CLK2-201ENST00000355560 P2RY1P47900 373 aa21.27■■□□□ 1
CLK2-201ENST00000355560 OR2B11Q5JQS5 317 aa21.27■■□□□ 1
CLK2-201ENST00000355560 LSM10Q969L4 123 aaKnown RBP21.27■■□□□ 1
CLK2-201ENST00000355560 SLC25A10Q9UBX3 287 aaPredicted RBP21.27■■□□□ 1
CLK2-201ENST00000355560 AUP1Q9Y679 476 aa21.27■■□□□ 1
CLK2-201ENST00000355560 ABCA4P78363 2273 aa21.27■■□□□ 1
CLK2-201ENST00000355560 IGHV1-69-2A0A0G2JMI3 117 aa21.26■□□□□ 0.99
CLK2-201ENST00000355560 ANKRD34BA5PLL1 514 aa21.26■□□□□ 0.99
CLK2-201ENST00000355560 TAAR5O14804 337 aa21.26■□□□□ 0.99
CLK2-201ENST00000355560 RAMP3O60896 148 aa21.26■□□□□ 0.99
CLK2-201ENST00000355560 CLDN14O95500 239 aa21.26■□□□□ 0.99
CLK2-201ENST00000355560 IGHV3-7P01780 117 aa21.26■□□□□ 0.99
CLK2-201ENST00000355560 IZUMO4Q1ZYL8 232 aa21.26■□□□□ 0.99
CLK2-201ENST00000355560 BAP18Q8IXM2 172 aa21.26■□□□□ 0.99
CLK2-201ENST00000355560 TCTEX1D2Q8WW35 142 aa21.26■□□□□ 0.99
CLK2-201ENST00000355560 TMEM204Q9BSN7 226 aa21.26■□□□□ 0.99
CLK2-201ENST00000355560 MAGT1Q9H0U3 335 aa21.26■□□□□ 0.99
CLK2-201ENST00000355560 A0A1B0GU03 582 aa21.26■□□□□ 0.99
CLK2-201ENST00000355560 SSSCA1O60232 199 aa21.26■□□□□ 0.99
CLK2-201ENST00000355560 IGKV1-5P01602 117 aa21.26■□□□□ 0.99
CLK2-201ENST00000355560 TMEM33P57088 247 aa21.26■□□□□ 0.99
CLK2-201ENST00000355560 FBXL17Q9UF56 701 aa21.26■□□□□ 0.99
CLK2-201ENST00000355560 CLDN1O95832 211 aa21.25■□□□□ 0.99
CLK2-201ENST00000355560 SLC25A6P12236 298 aa21.25■□□□□ 0.99
CLK2-201ENST00000355560 GPR12P47775 334 aa21.25■□□□□ 0.99
CLK2-201ENST00000355560 ID3Q02535 119 aa21.25■□□□□ 0.99
CLK2-201ENST00000355560 COMMD7Q86VX2 200 aa21.25■□□□□ 0.99
CLK2-201ENST00000355560 FAM216AQ8WUB2 273 aa21.25■□□□□ 0.99
CLK2-201ENST00000355560 GNLYP22749 145 aa21.25■□□□□ 0.99
CLK2-201ENST00000355560 LPAR6P43657 344 aa21.25■□□□□ 0.99
CLK2-201ENST00000355560 CXorf58Q96LI9 332 aa21.25■□□□□ 0.99
CLK2-201ENST00000355560 SLC25A32Q9H2D1 315 aa21.25■□□□□ 0.99
CLK2-201ENST00000355560 C11orf1Q9H5F2 150 aa21.25■□□□□ 0.99
CLK2-201ENST00000355560 ACACBO00763 2458 aa21.24■□□□□ 0.99
CLK2-201ENST00000355560 GPR137BO60478 399 aa21.24■□□□□ 0.99
CLK2-201ENST00000355560 PITX3O75364 302 aa21.24■□□□□ 0.99
CLK2-201ENST00000355560 PVALBP20472 110 aaPredicted RBP21.24■□□□□ 0.99
CLK2-201ENST00000355560 PLA2G5P39877 138 aa21.24■□□□□ 0.99
CLK2-201ENST00000355560 ZNF134P52741 427 aa21.24■□□□□ 0.99
CLK2-201ENST00000355560 C4orf17Q53FE4 359 aa21.24■□□□□ 0.99
CLK2-201ENST00000355560 CLEC9AQ6UXN8 241 aa21.24■□□□□ 0.99
CLK2-201ENST00000355560 ZNF66Q6ZN08 573 aa21.24■□□□□ 0.99
CLK2-201ENST00000355560 Q6ZRM9 215 aa21.24■□□□□ 0.99
CLK2-201ENST00000355560 HSD17B10Q99714 261 aaKnown RBP21.24■□□□□ 0.99
CLK2-201ENST00000355560 SMIM3Q9BZL3 60 aa21.24■□□□□ 0.99
CLK2-201ENST00000355560 CACNG5Q9UF02 275 aa21.24■□□□□ 0.99
CLK2-201ENST00000355560 SPTBN1Q01082 2364 aaKnown RBP21.24■□□□□ 0.99
CLK2-201ENST00000355560 ZNF729A6NN14 1252 aaPredicted RBP21.23■□□□□ 0.99
CLK2-201ENST00000355560 ZG16O60844 167 aa21.23■□□□□ 0.99
CLK2-201ENST00000355560 RRASP10301 218 aa21.23■□□□□ 0.99
CLK2-201ENST00000355560 ZNF816Q0VGE8 651 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms