RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 PIMREGQ9BSJ6 248 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 ZDHHC8Q9ULC8 765 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 NUBP1P53384 320 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 SRSF9Q13242 221 aaKnown RBP eCLIP11.4□□□□□ -0.58
SCN8A-202ENST00000355133 TM4SF20Q53R12 229 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 LEAP2Q969E1 77 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 FOXJ2Q9P0K8 574 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 SIPA1L3O60292 1781 aaPredicted RBP11.4□□□□□ -0.58
SCN8A-202ENST00000355133 FAM74A3Q4VXF1 159 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 SIRT7Q9NRC8 400 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 BET1LQ9NYM9 111 aa11.4□□□□□ -0.58
SCN8A-202ENST00000355133 VSIG10L2P0DP72 767 aa11.4□□□□□ -0.59
SCN8A-202ENST00000355133 MC5RP33032 325 aa11.4□□□□□ -0.59
SCN8A-202ENST00000355133 GFRA1P56159 465 aa11.4□□□□□ -0.59
SCN8A-202ENST00000355133 ZNF638Q14966 1978 aaKnown RBP11.39□□□□□ -0.59
SCN8A-202ENST00000355133 COX19Q49B96 90 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 MUC15Q8N387 334 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 ZNF738Q8NE65 137 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 FSTP19883 344 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 METTL26Q96S19 204 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 GPHA2Q96T91 129 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 KIAA1217Q5T5P2 1943 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 LAMB2P55268 1798 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 IGHV3OR16-10A0A075B7F0 116 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 IGLV1-36A0A0B4J1U3 117 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 ARF6P62330 175 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 TMEM78Q5T7P6 136 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 LYRM7Q5U5X0 104 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 CALHM1Q8IU99 346 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 OR5AU1Q8NGC0 362 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 OR10J6PQ8NGY7 276 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 PACRGQ96M98 296 aaPredicted RBP11.39□□□□□ -0.59
SCN8A-202ENST00000355133 RSG1Q9BU20 258 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 IDI2-AS1Q9NZ38 188 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 LHFPL6Q9Y693 200 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 LOC101059948A0A1B0GTJ6 334 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 H0Y980 276 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 CIDEAO60543 219 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 SEC11BP0C7V7 166 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 RBKSQ9H477 322 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 OR5AC2Q9NZP5 309 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 RNF115Q9Y4L5 304 aa11.39□□□□□ -0.59
SCN8A-202ENST00000355133 ELOA3CA0A087WX78 387 aaPredicted RBP11.38□□□□□ -0.59
SCN8A-202ENST00000355133 TMEM189A5PLL7 270 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 ATP5J2P56134 94 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 RPL8P62917 257 aaKnown RBP11.38□□□□□ -0.59
SCN8A-202ENST00000355133 SIGIRRQ6IA17 410 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 IL19Q9UHD0 177 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 TNFSF18Q9UNG2 199 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 PPIAL4CA0A0B4J2A2 164 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 LINC00869P0C866 280 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 PPIAL4GP0DN37 164 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 DCAF12L2Q5VW00 463 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 KLF14Q8TD94 323 aaPredicted RBP11.38□□□□□ -0.59
SCN8A-202ENST00000355133 RTN4RQ9BZR6 473 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 TLNRD1Q9H1K6 362 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 IFT22Q9H7X7 185 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 CALYQ9NYX4 217 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 TMEM229AB2RXF0 380 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 SLC25A17O43808 307 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 SS18L1O75177 396 aaPredicted RBP11.38□□□□□ -0.59
SCN8A-202ENST00000355133 PCOLCEQ15113 449 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 KCNE5Q9UJ90 142 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 TRIP12Q14669 1992 aaPredicted RBP11.38□□□□□ -0.59
SCN8A-202ENST00000355133 OR4C46A6NHA9 309 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 MMP9P14780 707 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 RRN3P1Q2M238 152 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 DNASE2BQ8WZ79 361 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 SCNM1Q9BWG6 230 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 COL4A5P29400 1685 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 SLC25A33Q9BSK2 321 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 HSPB8Q9UJY1 196 aa11.38□□□□□ -0.59
SCN8A-202ENST00000355133 DOCK5Q9H7D0 1870 aa11.37□□□□□ -0.59
SCN8A-202ENST00000355133 TRBV5-5A0A0J9YX44 114 aa11.37□□□□□ -0.59
SCN8A-202ENST00000355133 TIAF1O95411 115 aa11.37□□□□□ -0.59
SCN8A-202ENST00000355133 ZNF250P15622 560 aa11.37□□□□□ -0.59
SCN8A-202ENST00000355133 DLL3Q9NYJ7 618 aa11.37□□□□□ -0.59
SCN8A-202ENST00000355133 CD1AP06126 327 aa11.37□□□□□ -0.59
SCN8A-202ENST00000355133 SSTR5P35346 364 aa11.37□□□□□ -0.59
SCN8A-202ENST00000355133 VAX1Q5SQQ9 334 aa11.37□□□□□ -0.59
SCN8A-202ENST00000355133 WDFY1Q8IWB7 410 aa11.37□□□□□ -0.59
SCN8A-202ENST00000355133 ODAMA1E959 279 aa11.37□□□□□ -0.59
SCN8A-202ENST00000355133 MDKP21741 143 aaPredicted RBP11.37□□□□□ -0.59
SCN8A-202ENST00000355133 RHOVQ96L33 236 aa11.37□□□□□ -0.59
SCN8A-202ENST00000355133 TPRP12270 2363 aaKnown RBP11.37□□□□□ -0.59
SCN8A-202ENST00000355133 DLL1O00548 723 aa11.37□□□□□ -0.59
SCN8A-202ENST00000355133 PGLYRP1O75594 196 aaPredicted RBP11.37□□□□□ -0.59
SCN8A-202ENST00000355133 HOXA6P31267 233 aa11.37□□□□□ -0.59
SCN8A-202ENST00000355133 LINC01560Q8TB33 94 aa11.37□□□□□ -0.59
SCN8A-202ENST00000355133 TBX15Q96SF7 602 aa11.37□□□□□ -0.59
SCN8A-202ENST00000355133 TMEM222Q9H0R3 208 aa11.37□□□□□ -0.59
SCN8A-202ENST00000355133 M0R3E3 92 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 REG1AP05451 166 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 POM121Q96HA1 1249 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 PLXNB2O15031 1838 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 hCG_38984A0A1B0GV85 526 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 M0R143 59 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 FCGR2BP31994 310 aaPredicted RBP11.36□□□□□ -0.59
SCN8A-202ENST00000355133 MMD2Q8IY49 270 aa11.36□□□□□ -0.59
SCN8A-202ENST00000355133 FOCADQ5VW36 1801 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms