RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 PIFOQ8TCI5 191 aa17.86■□□□□ 0.45
SHMT1-203ENST00000354098 SAA2-SAA4A0A096LPE2 208 aa17.85■□□□□ 0.45
SHMT1-203ENST00000354098 SAA2P0DJI9 122 aaPredicted RBP17.85■□□□□ 0.45
SHMT1-203ENST00000354098 IL3RAP26951 378 aa17.85■□□□□ 0.45
SHMT1-203ENST00000354098 HRH1P35367 487 aa17.85■□□□□ 0.45
SHMT1-203ENST00000354098 RAB7AP51149 207 aa17.85■□□□□ 0.45
SHMT1-203ENST00000354098 ZNF137PP52743 207 aa17.85■□□□□ 0.45
SHMT1-203ENST00000354098 LRRC75BQ2VPJ9 315 aa17.85■□□□□ 0.45
SHMT1-203ENST00000354098 SPANXN2Q5MJ10 180 aa17.85■□□□□ 0.45
SHMT1-203ENST00000354098 OVCH2Q7RTZ1 564 aa17.85■□□□□ 0.45
SHMT1-203ENST00000354098 VGLL3A8MV65 326 aa17.84■□□□□ 0.45
SHMT1-203ENST00000354098 H3BUX3 64 aa17.84■□□□□ 0.45
SHMT1-203ENST00000354098 LANCL1O43813 399 aa17.84■□□□□ 0.45
SHMT1-203ENST00000354098 CD24P25063 80 aa17.84■□□□□ 0.45
SHMT1-203ENST00000354098 FCGR2CP31995 323 aa17.84■□□□□ 0.45
SHMT1-203ENST00000354098 PYDC2Q56P42 97 aa17.84■□□□□ 0.45
SHMT1-203ENST00000354098 RPL39P5Q59GN2 51 aa17.84■□□□□ 0.45
SHMT1-203ENST00000354098 OR5H2Q8NGV7 314 aa17.84■□□□□ 0.45
SHMT1-203ENST00000354098 SSMEM1Q8WWF3 244 aa17.84■□□□□ 0.45
SHMT1-203ENST00000354098 RTN4IP1Q8WWV3 396 aaPredicted RBP17.84■□□□□ 0.45
SHMT1-203ENST00000354098 EHFQ9NZC4 300 aa17.84■□□□□ 0.45
SHMT1-203ENST00000354098 A0A1W2PPI3 338 aa17.83■□□□□ 0.45
SHMT1-203ENST00000354098 OOSP1A8MZH6 123 aa17.83■□□□□ 0.45
SHMT1-203ENST00000354098 GSTZ1O43708 216 aaPredicted RBP17.83■□□□□ 0.45
SHMT1-203ENST00000354098 GAPDHP04406 335 aaKnown RBP17.83■□□□□ 0.45
SHMT1-203ENST00000354098 TAS2R46P59540 309 aa17.83■□□□□ 0.45
SHMT1-203ENST00000354098 ACTBP60709 375 aa17.83■□□□□ 0.45
SHMT1-203ENST00000354098 ACTG1P63261 375 aa17.83■□□□□ 0.45
SHMT1-203ENST00000354098 ZNF816Q0VGE8 651 aaPredicted RBP17.83■□□□□ 0.45
SHMT1-203ENST00000354098 RBMXL1Q96E39 390 aaKnown RBP17.83■□□□□ 0.45
SHMT1-203ENST00000354098 ZNF251Q9BRH9 671 aa17.83■□□□□ 0.45
SHMT1-203ENST00000354098 PTTG2Q9NZH5 202 aa17.83■□□□□ 0.45
SHMT1-203ENST00000354098 RBMX2Q9Y388 322 aaKnown RBP17.83■□□□□ 0.45
SHMT1-203ENST00000354098 OR2W1Q9Y3N9 320 aa17.83■□□□□ 0.45
SHMT1-203ENST00000354098 A0A0A6YYJ9 748 aa17.83■□□□□ 0.44
SHMT1-203ENST00000354098 TIMM23O14925 209 aa17.83■□□□□ 0.44
SHMT1-203ENST00000354098 RAB29O14966 203 aa17.83■□□□□ 0.44
SHMT1-203ENST00000354098 PROP1O75360 226 aa17.83■□□□□ 0.44
SHMT1-203ENST00000354098 TUSC2O75896 110 aa17.83■□□□□ 0.44
SHMT1-203ENST00000354098 CHIAQ9BZP6 476 aa17.83■□□□□ 0.44
SHMT1-203ENST00000354098 OR2D2Q9H210 308 aa17.83■□□□□ 0.44
SHMT1-203ENST00000354098 DPAGT1Q9H3H5 408 aa17.83■□□□□ 0.44
SHMT1-203ENST00000354098 PIPOXQ9P0Z9 390 aa17.83■□□□□ 0.44
SHMT1-203ENST00000354098 RBM7Q9Y580 266 aaKnown RBP17.83■□□□□ 0.44
SHMT1-203ENST00000354098 IGKV1D-13A0A0B4J2D9 117 aa17.82■□□□□ 0.44
SHMT1-203ENST00000354098 IGHV1-3A0A0C4DH29 117 aa17.82■□□□□ 0.44
SHMT1-203ENST00000354098 ZNF736B4DX44 427 aaPredicted RBP17.82■□□□□ 0.44
SHMT1-203ENST00000354098 M0QYG6 137 aa17.82■□□□□ 0.44
SHMT1-203ENST00000354098 CD3DP04234 171 aa17.82■□□□□ 0.44
SHMT1-203ENST00000354098 IGKV1-13P0DP09 117 aa17.82■□□□□ 0.44
SHMT1-203ENST00000354098 AADACP22760 399 aa17.82■□□□□ 0.44
SHMT1-203ENST00000354098 DYRK1AQ13627 763 aa17.82■□□□□ 0.44
SHMT1-203ENST00000354098 LY6EQ16553 131 aa17.82■□□□□ 0.44
SHMT1-203ENST00000354098 AANATQ16613 207 aa17.82■□□□□ 0.44
SHMT1-203ENST00000354098 FBLN7Q53RD9 439 aa17.82■□□□□ 0.44
SHMT1-203ENST00000354098 CCDC144NLQ6NUI1 221 aa17.82■□□□□ 0.44
SHMT1-203ENST00000354098 ZNF833PQ6ZTB9 187 aa17.82■□□□□ 0.44
SHMT1-203ENST00000354098 TGIF2LXQ8IUE1 241 aa17.82■□□□□ 0.44
SHMT1-203ENST00000354098 DRAM1Q8N682 238 aa17.82■□□□□ 0.44
SHMT1-203ENST00000354098 JMJD8Q96S16 334 aa17.82■□□□□ 0.44
SHMT1-203ENST00000354098 PTBP1P26599 531 aaKnown RBP eCLIP17.81■□□□□ 0.44
SHMT1-203ENST00000354098 GPR12P47775 334 aa17.81■□□□□ 0.44
SHMT1-203ENST00000354098 DYNLT3P51808 116 aa17.81■□□□□ 0.44
SHMT1-203ENST00000354098 UBA52P62987 128 aaKnown RBP17.81■□□□□ 0.44
SHMT1-203ENST00000354098 MOB3BQ86TA1 216 aa17.81■□□□□ 0.44
SHMT1-203ENST00000354098 Q8N402 240 aa17.81■□□□□ 0.44
SHMT1-203ENST00000354098 OR56B4Q8NH76 319 aa17.81■□□□□ 0.44
SHMT1-203ENST00000354098 CFHR4Q92496 578 aa17.81■□□□□ 0.44
SHMT1-203ENST00000354098 THAP7Q9BT49 309 aaPredicted RBP17.81■□□□□ 0.44
SHMT1-203ENST00000354098 ABCB10Q9NRK6 738 aa17.81■□□□□ 0.44
SHMT1-203ENST00000354098 ZNF221Q9UK13 617 aa17.81■□□□□ 0.44
SHMT1-203ENST00000354098 POMT1Q9Y6A1 747 aa17.81■□□□□ 0.44
SHMT1-203ENST00000354098 IGHV3-72A0A0B4J1Y9 119 aa17.8■□□□□ 0.44
SHMT1-203ENST00000354098 SSBP1Q04837 148 aaKnown RBP17.8■□□□□ 0.44
SHMT1-203ENST00000354098 ZNF660Q6AZW8 331 aaPredicted RBP17.8■□□□□ 0.44
SHMT1-203ENST00000354098 DHRS11Q6UWP2 260 aa17.8■□□□□ 0.44
SHMT1-203ENST00000354098 OR8H3Q8N146 312 aa17.8■□□□□ 0.44
SHMT1-203ENST00000354098 TMEM229BQ8NBD8 167 aa17.8■□□□□ 0.44
SHMT1-203ENST00000354098 OR4D10Q8NGI6 311 aa17.8■□□□□ 0.44
SHMT1-203ENST00000354098 GIMAP1Q8WWP7 306 aa17.8■□□□□ 0.44
SHMT1-203ENST00000354098 C5orf30Q96GV9 206 aa17.8■□□□□ 0.44
SHMT1-203ENST00000354098 MRPL20Q9BYC9 149 aaKnown RBP17.8■□□□□ 0.44
SHMT1-203ENST00000354098 TINAGL1Q9GZM7 467 aaPredicted RBP17.8■□□□□ 0.44
SHMT1-203ENST00000354098 SRRQ9GZT4 340 aa17.8■□□□□ 0.44
SHMT1-203ENST00000354098 GHITMQ9H3K2 345 aa17.8■□□□□ 0.44
SHMT1-203ENST00000354098 CLDN34H7C241 214 aa17.8■□□□□ 0.44
SHMT1-203ENST00000354098 PPYP01298 95 aa17.8■□□□□ 0.44
SHMT1-203ENST00000354098 LUMP51884 338 aaPredicted RBP17.8■□□□□ 0.44
SHMT1-203ENST00000354098 CCBE1Q6UXH8 406 aaPredicted RBP17.8■□□□□ 0.44
SHMT1-203ENST00000354098 TMEM86BQ8N661 226 aa17.8■□□□□ 0.44
SHMT1-203ENST00000354098 S1PR3Q99500 378 aa17.8■□□□□ 0.44
SHMT1-203ENST00000354098 ZNF2Q9BSG1 426 aaPredicted RBP17.8■□□□□ 0.44
SHMT1-203ENST00000354098 SDHAF2Q9NX18 166 aa17.8■□□□□ 0.44
SHMT1-203ENST00000354098 BRS3P32247 399 aa17.79■□□□□ 0.44
SHMT1-203ENST00000354098 ARHGDIBP52566 201 aa17.79■□□□□ 0.44
SHMT1-203ENST00000354098 LINC00205P59089 165 aa17.79■□□□□ 0.44
SHMT1-203ENST00000354098 DRAXINQ8NBI3 349 aaPredicted RBP17.79■□□□□ 0.44
SHMT1-203ENST00000354098 OR5R1Q8NH85 324 aa17.79■□□□□ 0.44
SHMT1-203ENST00000354098 VPREB3Q9UKI3 123 aa17.79■□□□□ 0.44
SHMT1-203ENST00000354098 BTBD17A6NE02 478 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms