RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 MPTX1A8MV57 137 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 H0Y980 276 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 M0R1B8 84 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 SIRPB1O00241 398 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 HSPB6O14558 160 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 TAAR5O14804 337 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 BET1O15155 118 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 DEDDO75618 318 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 CDS2O95674 445 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 GRPP07492 148 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 NMBP08949 121 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 HOXB5P09067 269 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 DUX4L2P0CJ85 424 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 DUX4L3P0CJ86 424 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 DUX4L4P0CJ87 422 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 DUX4L5P0CJ88 424 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 DUX4L6P0CJ89 424 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 DUX4L7P0CJ90 424 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 IGKV1-13P0DP09 117 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 UCP1P25874 307 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 SRP14P37108 136 aaKnown RBP6.82□□□□□ -1.32
CD44-205ENST00000352818 GATA4P43694 442 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 FABP6P51161 128 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 KLF3P57682 345 aaPredicted RBP6.82□□□□□ -1.32
CD44-205ENST00000352818 DSCR9P59020 149 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 HILS1P60008 231 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 RAB32Q13637 225 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 SMCO1Q147U7 214 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 TRAT1Q6PIZ9 186 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 ZNF818PQ6ZRF7 136 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 CMTM1Q8IZ96 169 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 BVESQ8NE79 360 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 OR5D13Q8NGL4 314 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 OR1S1Q8NH92 325 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 OR10J5Q8NHC4 309 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 AKR1E2Q96JD6 320 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 SPIN2AQ99865 258 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 SPIN2BQ9BPZ2 258 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 SLC5A7Q9GZV3 580 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 PLEKHA2Q9HB19 425 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 ESM1Q9NQ30 184 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 OR5AC2Q9NZP5 309 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 DUX4Q9UBX2 424 aa6.82□□□□□ -1.32
CD44-205ENST00000352818 A6NLC8 198 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 SRRM5B3KS81 715 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 LY6HO94772 140 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 ZNF205O95201 554 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 RLN2P04090 185 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 TPT1P13693 172 aaKnown RBP6.81□□□□□ -1.32
CD44-205ENST00000352818 RCC1P18754 421 aaPredicted RBP6.81□□□□□ -1.32
CD44-205ENST00000352818 EIF5AP63241 154 aaKnown RBP6.81□□□□□ -1.32
CD44-205ENST00000352818 ATXN7L3Q14CW9 347 aaPredicted RBP6.81□□□□□ -1.32
CD44-205ENST00000352818 MSMPQ1L6U9 139 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 ZNF672Q499Z4 452 aaPredicted RBP6.81□□□□□ -1.32
CD44-205ENST00000352818 C6orf183Q5T699 404 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 PRAMEF6Q5VXH4 476 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 ALKAL2Q6UX46 152 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 TBC1D26Q86UD7 250 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 COMMD7Q86VX2 200 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 FAM71E2Q8N5Q1 922 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 OR10V1Q8NGI7 309 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 OR4D5Q8NGN0 318 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 OR11L1Q8NGX0 322 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 LRRC20Q8TCA0 184 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 SECTM1Q8WVN6 248 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 FAM168AQ92567 244 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 RRNAD1Q96FB5 475 aaKnown RBP6.81□□□□□ -1.32
CD44-205ENST00000352818 MEGF10Q96KG7 1140 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 TP53RKQ96S44 253 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 ZNF471Q9BX82 626 aaPredicted RBP6.81□□□□□ -1.32
CD44-205ENST00000352818 NCOR1P1Q9H4R4 102 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 CYTL1Q9NRR1 136 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 METRNQ9UJH8 293 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 TRAPPC2LQ9UL33 140 aa6.81□□□□□ -1.32
CD44-205ENST00000352818 hCG_1807616A0A1W2PRN6 198 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 OOEPA6NGQ2 149 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 ZSCAN5BA6NJL1 495 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 E5RGE8 158 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 F5H0A9 414 aaPredicted RBP6.8□□□□□ -1.32
CD44-205ENST00000352818 K7EPK0 472 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 WNT9BO14905 357 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 PSPNO60542 156 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 PGLYRP1O75594 196 aaPredicted RBP6.8□□□□□ -1.32
CD44-205ENST00000352818 SPDEFO95238 335 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 GAPDHP04406 335 aaKnown RBP6.8□□□□□ -1.32
CD44-205ENST00000352818 ADH4P08319 380 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 SLC25A6P12236 298 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 PTAFRP25105 342 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 F2RP25116 425 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 CD40P25942 277 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 OR3A1P47881 315 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 LUMP51884 338 aaPredicted RBP6.8□□□□□ -1.32
CD44-205ENST00000352818 SELENOVP59797 346 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 S100A10P60903 97 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 C11orf71Q6IPW1 123 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 TMEM108Q6UXF1 575 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 ZNF826PQ6ZT77 177 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 LYZL2Q7Z4W2 148 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 WFDC8Q8IUA0 241 aa6.8□□□□□ -1.32
CD44-205ENST00000352818 PDZD9Q8IXQ8 264 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms