RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 SMAGPQ0VAQ4 97 aa13.3□□□□□ -0.28
PTPRO-202ENST00000348962 AANATQ16613 207 aa13.3□□□□□ -0.28
PTPRO-202ENST00000348962 NUP37Q8NFH4 326 aa13.3□□□□□ -0.28
PTPRO-202ENST00000348962 NAT8Q9UHE5 227 aa13.3□□□□□ -0.28
PTPRO-202ENST00000348962 CHCHD2Q9Y6H1 151 aaPredicted RBP13.3□□□□□ -0.28
PTPRO-202ENST00000348962 RFPL3SP0C7P2 107 aa13.3□□□□□ -0.28
PTPRO-202ENST00000348962 VAX1Q5SQQ9 334 aa13.3□□□□□ -0.28
PTPRO-202ENST00000348962 TMEM116Q8NCL8 245 aa13.3□□□□□ -0.28
PTPRO-202ENST00000348962 TMEM186Q96B77 213 aa13.3□□□□□ -0.28
PTPRO-202ENST00000348962 DSPPQ9NZW4 1301 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 ZNHIT1O43257 154 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 MUC1P15941 1255 aaPredicted RBP13.29□□□□□ -0.28
PTPRO-202ENST00000348962 LY6EQ16553 131 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 C10orf128Q5T292 105 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 RBM14Q96PK6 669 aaKnown RBP13.29□□□□□ -0.28
PTPRO-202ENST00000348962 NXF2Q9GZY0 626 aaKnown RBP13.29□□□□□ -0.28
PTPRO-202ENST00000348962 DOPEY2Q9Y3R5 2298 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 TM4SF20Q53R12 229 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 FDX2Q6P4F2 183 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 CENPVQ7Z7K6 275 aaPredicted RBP13.29□□□□□ -0.28
PTPRO-202ENST00000348962 AMELYQ99218 206 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 LPAR5Q9H1C0 372 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 ABCA7Q8IZY2 2146 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 hCG_38984A0A1B0GV85 526 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 BMPR1BO00238 502 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 MFNGO00587 321 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 ZNF735P0CB33 412 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 CD1BP29016 333 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 DDB2Q92466 427 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 SRD5A3Q9H8P0 318 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 JPT1Q9UK76 154 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 SPTBP11277 2137 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 TMEM78Q5T7P6 136 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 ZNF645Q8N7E2 425 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 VAX2Q9UIW0 290 aa13.29□□□□□ -0.28
PTPRO-202ENST00000348962 TRBV5-5A0A0J9YX44 114 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 CTXND1A0A1B0GTU2 59 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 HELTA6NFD8 242 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 PF4P02776 101 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 CEBPEQ15744 281 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 RRN3P1Q2M238 152 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 SNAI3Q3KNW1 292 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 IGSF11Q5DX21 431 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 C1orf162Q8NEQ5 155 aaPredicted RBP13.28□□□□□ -0.28
PTPRO-202ENST00000348962 OR10J6PQ8NGY7 276 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 C16orf92Q96LL3 132 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 DOCK5Q9H7D0 1870 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 AUP1Q9Y679 476 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 SLC25A17O43808 307 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 RANP62826 216 aaKnown RBP13.28□□□□□ -0.28
PTPRO-202ENST00000348962 RNF212Q495C1 297 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 CLEC9AQ6UXN8 241 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 H0Y980 276 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 PRSS1P07477 247 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 MFAP4P55083 255 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 PAXXQ9BUH6 204 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 TOLLIPQ9H0E2 274 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 MIXL1Q9H2W2 232 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 AKIRIN1Q9H9L7 192 aaPredicted RBP13.28□□□□□ -0.28
PTPRO-202ENST00000348962 BRWD3Q6RI45 1802 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 SCTP09683 121 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 PRSS53Q2L4Q9 553 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 ACSF3Q4G176 576 aaPredicted RBP13.28□□□□□ -0.28
PTPRO-202ENST00000348962 HCP5Q6MZN7 132 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 KCNK7Q9Y2U2 307 aa13.28□□□□□ -0.28
PTPRO-202ENST00000348962 USF1P22415 310 aaPredicted RBP13.27□□□□□ -0.28
PTPRO-202ENST00000348962 WNT5AP41221 380 aa13.27□□□□□ -0.28
PTPRO-202ENST00000348962 IMMP1LQ96LU5 166 aa13.27□□□□□ -0.28
PTPRO-202ENST00000348962 PDE6DO43924 150 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 C1orf100Q5SVJ3 147 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 SPANXN1Q5VSR9 72 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 VWA1Q6PCB0 445 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 EIF4E3Q8N5X7 224 aaKnown RBP13.27□□□□□ -0.29
PTPRO-202ENST00000348962 IGKV3D-11A0A0A0MRZ8 115 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 A0A1W2PP11 408 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 J3QR89 54 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 RGS13O14921 159 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 ADAM11O75078 769 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 C1QCP02747 245 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 MGPP08493 103 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 G0S2P27469 103 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 ALX4Q9H161 411 aaPredicted RBP13.27□□□□□ -0.29
PTPRO-202ENST00000348962 LRRC37AA6NMS7 1700 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 TRAV30A0A087WSZ9 112 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 CDRT15L2A8MXV6 281 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 MPDU1O75352 247 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 PGA5P0DJD9 388 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 SCGB1C2P0DMR2 95 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 MRPL14Q6P1L8 145 aaKnown RBP13.27□□□□□ -0.29
PTPRO-202ENST00000348962 PNKDQ8N490 385 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 ADAD2Q8NCV1 583 aaKnown RBP13.27□□□□□ -0.29
PTPRO-202ENST00000348962 OR52M1Q8NGK5 317 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 SIRT4Q9Y6E7 314 aaPredicted RBP13.27□□□□□ -0.29
PTPRO-202ENST00000348962 V9GYH0 126 aa13.27□□□□□ -0.29
PTPRO-202ENST00000348962 IGKV1D-42A0A075B6H8 117 aa13.26□□□□□ -0.29
PTPRO-202ENST00000348962 CELA3AP09093 270 aa13.26□□□□□ -0.29
PTPRO-202ENST00000348962 OR10J1P30954 320 aa13.26□□□□□ -0.29
PTPRO-202ENST00000348962 CEBPDP49716 269 aaPredicted RBP13.26□□□□□ -0.29
PTPRO-202ENST00000348962 OR4C13Q8NGP0 309 aa13.26□□□□□ -0.29
PTPRO-202ENST00000348962 TMEM106BQ9NUM4 274 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms