RNA–Protein interactions for RNA: ENST00000346606.10

CSHL1-203, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-203ENST00000346606 FOXE3Q13461 319 aa11.33□□□□□ -0.6
CSHL1-203ENST00000346606 CXorf66Q5JRM2 361 aaPredicted RBP11.33□□□□□ -0.6
CSHL1-203ENST00000346606 OR2S2Q9NQN1 319 aa11.33□□□□□ -0.6
CSHL1-203ENST00000346606 MBNL3Q9NUK0 354 aaKnown RBP11.33□□□□□ -0.6
CSHL1-203ENST00000346606 SHISA3A0PJX4 238 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 GAPDHP04406 335 aaKnown RBP11.32□□□□□ -0.6
CSHL1-203ENST00000346606 ELANEP08246 267 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 RAB3BP20337 219 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 IL3RAP26951 378 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 REG1BP48304 166 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 EBI3Q14213 229 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 NEDD8Q15843 81 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 TMEM30BQ3MIR4 351 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 C5orf24Q7Z6I8 188 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 MOB3BQ86TA1 216 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 OR8H3Q8N146 312 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 FAM89BQ8N5H3 189 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 LINC00311Q8N616 119 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 Q8N6K4 173 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 Q8N9W7 124 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 OR11H1Q8NG94 326 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 RBMXL1Q96E39 390 aaKnown RBP11.32□□□□□ -0.6
CSHL1-203ENST00000346606 ABCG5Q9H222 651 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 EDA2RQ9HAV5 297 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 TXNL4BQ9NX01 149 aaKnown RBP11.32□□□□□ -0.6
CSHL1-203ENST00000346606 ABRACLQ9P1F3 81 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 RAB22AQ9UL26 194 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 STUB1Q9UNE7 303 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 SSR3Q9UNL2 185 aa11.32□□□□□ -0.6
CSHL1-203ENST00000346606 IGHV3-72A0A0B4J1Y9 119 aa11.31□□□□□ -0.6
CSHL1-203ENST00000346606 TMEM272A0A1B0GTI8 110 aa11.31□□□□□ -0.6
CSHL1-203ENST00000346606 SMIM30A4D0T7 59 aa11.31□□□□□ -0.6
CSHL1-203ENST00000346606 IFITM5A6NNB3 132 aa11.31□□□□□ -0.6
CSHL1-203ENST00000346606 HSD17B6O14756 317 aa11.31□□□□□ -0.6
CSHL1-203ENST00000346606 SLC31A2O15432 143 aa11.31□□□□□ -0.6
CSHL1-203ENST00000346606 KIAA0141Q14154 515 aaPredicted RBP11.31□□□□□ -0.6
CSHL1-203ENST00000346606 Q3ZCU0 254 aa11.31□□□□□ -0.6
CSHL1-203ENST00000346606 KCTD21Q4G0X4 260 aa11.31□□□□□ -0.6
CSHL1-203ENST00000346606 ZNF554Q86TJ5 538 aa11.31□□□□□ -0.6
CSHL1-203ENST00000346606 C8orf31Q8N9H6 132 aa11.31□□□□□ -0.6
CSHL1-203ENST00000346606 OR52L2PQ8NGH6 319 aa11.31□□□□□ -0.6
CSHL1-203ENST00000346606 OR56B1Q8NGI3 324 aa11.31□□□□□ -0.6
CSHL1-203ENST00000346606 C4orf3Q8WVX3 66 aa11.31□□□□□ -0.6
CSHL1-203ENST00000346606 GALMQ96C23 342 aa11.31□□□□□ -0.6
CSHL1-203ENST00000346606 EAF1Q96JC9 268 aaPredicted RBP11.31□□□□□ -0.6
CSHL1-203ENST00000346606 PLSCR3Q9NRY6 295 aa11.31□□□□□ -0.6
CSHL1-203ENST00000346606 AK3Q9UIJ7 227 aa11.31□□□□□ -0.6
CSHL1-203ENST00000346606 IGHG4P01861 327 aa11.3□□□□□ -0.6
CSHL1-203ENST00000346606 FGF9P31371 208 aaPredicted RBP11.3□□□□□ -0.6
CSHL1-203ENST00000346606 INSL3P51460 131 aa11.3□□□□□ -0.6
CSHL1-203ENST00000346606 ZNF134P52741 427 aa11.3□□□□□ -0.6
CSHL1-203ENST00000346606 TMEM50BP56557 158 aa11.3□□□□□ -0.6
CSHL1-203ENST00000346606 ZNF816Q0VGE8 651 aaPredicted RBP11.3□□□□□ -0.6
CSHL1-203ENST00000346606 GNMTQ14749 295 aa11.3□□□□□ -0.6
CSHL1-203ENST00000346606 MORN2Q502X0 79 aa11.3□□□□□ -0.6
CSHL1-203ENST00000346606 CT45A1Q5HYN5 189 aa11.3□□□□□ -0.6
CSHL1-203ENST00000346606 SLC25A48Q6ZT89 311 aaKnown RBP11.3□□□□□ -0.6
CSHL1-203ENST00000346606 TGIF2LXQ8IUE1 241 aa11.3□□□□□ -0.6
CSHL1-203ENST00000346606 ZNF439Q8NDP4 499 aa11.3□□□□□ -0.6
CSHL1-203ENST00000346606 CT45A3Q8NHU0 189 aa11.3□□□□□ -0.6
CSHL1-203ENST00000346606 MYOZ3Q8TDC0 251 aa11.3□□□□□ -0.6
CSHL1-203ENST00000346606 IL1F10Q8WWZ1 152 aa11.3□□□□□ -0.6
CSHL1-203ENST00000346606 ARHGAP5-AS1Q96IT6 56 aa11.3□□□□□ -0.6
CSHL1-203ENST00000346606 HSPB9Q9BQS6 159 aa11.3□□□□□ -0.6
CSHL1-203ENST00000346606 PECRQ9BY49 303 aa11.3□□□□□ -0.6
CSHL1-203ENST00000346606 OR51E2Q9H255 320 aa11.3□□□□□ -0.6
CSHL1-203ENST00000346606 RIMS4Q9H426 269 aaPredicted RBP11.3□□□□□ -0.6
CSHL1-203ENST00000346606 GNB4Q9HAV0 340 aa11.3□□□□□ -0.6
CSHL1-203ENST00000346606 JPT1Q9UK76 154 aa11.3□□□□□ -0.6
CSHL1-203ENST00000346606 HSF4Q9ULV5 492 aa11.3□□□□□ -0.6
CSHL1-203ENST00000346606 A0A0B4J203 849 aa11.29□□□□□ -0.6
CSHL1-203ENST00000346606 IGHV1-3A0A0C4DH29 117 aa11.29□□□□□ -0.6
CSHL1-203ENST00000346606 NCBP2LA6PVI3 153 aaKnown RBP11.29□□□□□ -0.6
CSHL1-203ENST00000346606 LDLRAD4O15165 306 aa11.29□□□□□ -0.6
CSHL1-203ENST00000346606 RGS11O94810 467 aa11.29□□□□□ -0.6
CSHL1-203ENST00000346606 NAPSAO96009 420 aa11.29□□□□□ -0.6
CSHL1-203ENST00000346606 SPNP16150 400 aa11.29□□□□□ -0.6
CSHL1-203ENST00000346606 PSMB8P28062 276 aa11.29□□□□□ -0.6
CSHL1-203ENST00000346606 PPP1CCP36873 323 aaKnown RBP11.29□□□□□ -0.6
CSHL1-203ENST00000346606 HTD2P86397 168 aa11.29□□□□□ -0.6
CSHL1-203ENST00000346606 PLA2G7Q13093 441 aa11.29□□□□□ -0.6
CSHL1-203ENST00000346606 HMGN3Q15651 99 aa11.29□□□□□ -0.6
CSHL1-203ENST00000346606 RTN4IP1Q8WWV3 396 aaPredicted RBP11.29□□□□□ -0.6
CSHL1-203ENST00000346606 CMSS1Q9BQ75 279 aaKnown RBP11.29□□□□□ -0.6
CSHL1-203ENST00000346606 TM2D3Q9BRN9 247 aa11.29□□□□□ -0.6
CSHL1-203ENST00000346606 CHCHD6Q9BRQ6 235 aa11.29□□□□□ -0.6
CSHL1-203ENST00000346606 HDHD3Q9BSH5 251 aaPredicted RBP11.29□□□□□ -0.6
CSHL1-203ENST00000346606 KLK15Q9H2R5 256 aa11.29□□□□□ -0.6
CSHL1-203ENST00000346606 ZMAT4Q9H898 229 aa11.29□□□□□ -0.6
CSHL1-203ENST00000346606 LIN7CQ9NUP9 197 aaKnown RBP11.29□□□□□ -0.6
CSHL1-203ENST00000346606 HERC2O95714 4834 aa11.28□□□□□ -0.6
CSHL1-203ENST00000346606 LOC100506127A0A0U1RQW1 187 aa11.28□□□□□ -0.6
CSHL1-203ENST00000346606 TRIM64CA6NLI5 447 aa11.28□□□□□ -0.6
CSHL1-203ENST00000346606 FOXI3A8MTJ6 420 aaPredicted RBP11.28□□□□□ -0.6
CSHL1-203ENST00000346606 SLC2A2P11168 524 aaPredicted RBP11.28□□□□□ -0.6
CSHL1-203ENST00000346606 CD36P16671 472 aa11.28□□□□□ -0.6
CSHL1-203ENST00000346606 MRPS15P82914 257 aaKnown RBP11.28□□□□□ -0.6
CSHL1-203ENST00000346606 PLAC9Q5JTB6 97 aa11.28□□□□□ -0.6
CSHL1-203ENST00000346606 STEAP3Q658P3 488 aa11.28□□□□□ -0.6
CSHL1-203ENST00000346606 ZNF880Q6PDB4 577 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms