RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 TMEM78Q5T7P6 136 aa16.96■□□□□ 0.31
HDAC4-201ENST00000345617 HSPB7Q9UBY9 170 aa16.96■□□□□ 0.31
HDAC4-201ENST00000345617 KLRB1Q12918 225 aa16.96■□□□□ 0.31
HDAC4-201ENST00000345617 KIR2DL4Q99706 377 aa16.96■□□□□ 0.31
HDAC4-201ENST00000345617 OR4C45A6NMZ5 311 aa16.96■□□□□ 0.31
HDAC4-201ENST00000345617 ZNF79Q15937 498 aa16.96■□□□□ 0.31
HDAC4-201ENST00000345617 ZNF841Q6ZN19 808 aa16.96■□□□□ 0.31
HDAC4-201ENST00000345617 BEND2Q8NDZ0 799 aa16.96■□□□□ 0.31
HDAC4-201ENST00000345617 NBASA2RRP1 2371 aa16.96■□□□□ 0.31
HDAC4-201ENST00000345617 C1QTNF9BB2RNN3 333 aa16.96■□□□□ 0.31
HDAC4-201ENST00000345617 TMPRSS2O15393 492 aa16.96■□□□□ 0.31
HDAC4-201ENST00000345617 SLC23A3Q6PIS1 610 aa16.96■□□□□ 0.31
HDAC4-201ENST00000345617 PRNTQ86SH4 94 aa16.96■□□□□ 0.31
HDAC4-201ENST00000345617 RHOVQ96L33 236 aa16.96■□□□□ 0.31
HDAC4-201ENST00000345617 TRPM7Q96QT4 1865 aa16.96■□□□□ 0.31
HDAC4-201ENST00000345617 CDC42EP2O14613 210 aa16.96■□□□□ 0.3
HDAC4-201ENST00000345617 DLK2Q6UY11 383 aa16.96■□□□□ 0.3
HDAC4-201ENST00000345617 UBALD2Q8IYN6 164 aa16.96■□□□□ 0.3
HDAC4-201ENST00000345617 LINC01465Q8N7H1 131 aa16.96■□□□□ 0.3
HDAC4-201ENST00000345617 PGLYRP3Q96LB9 341 aa16.96■□□□□ 0.3
HDAC4-201ENST00000345617 ADAD2Q8NCV1 583 aaKnown RBP16.96■□□□□ 0.3
HDAC4-201ENST00000345617 WNT9BO14905 357 aa16.95■□□□□ 0.3
HDAC4-201ENST00000345617 PLA2G10O15496 165 aa16.95■□□□□ 0.3
HDAC4-201ENST00000345617 RPS11P62280 158 aaKnown RBP eCLIP16.95■□□□□ 0.3
HDAC4-201ENST00000345617 FAM222BQ8WU58 562 aa16.95■□□□□ 0.3
HDAC4-201ENST00000345617 METTL26Q96S19 204 aa16.95■□□□□ 0.3
HDAC4-201ENST00000345617 A0A1B0GTL3 188 aa16.95■□□□□ 0.3
HDAC4-201ENST00000345617 PPIHO43447 177 aaKnown RBP16.95■□□□□ 0.3
HDAC4-201ENST00000345617 ZNF793Q6ZN11 406 aa16.95■□□□□ 0.3
HDAC4-201ENST00000345617 OR8B2Q96RD0 313 aa16.95■□□□□ 0.3
HDAC4-201ENST00000345617 LOC389332A0A1B0GUA5 103 aa16.95■□□□□ 0.3
HDAC4-201ENST00000345617 TMEM250H0YL14 139 aa16.95■□□□□ 0.3
HDAC4-201ENST00000345617 K7N7A8 449 aa16.95■□□□□ 0.3
HDAC4-201ENST00000345617 SLC25A17O43808 307 aa16.95■□□□□ 0.3
HDAC4-201ENST00000345617 TMEM131Q92545 1883 aa16.95■□□□□ 0.3
HDAC4-201ENST00000345617 TM4SF4P48230 202 aa16.95■□□□□ 0.3
HDAC4-201ENST00000345617 MRPS18AQ9NVS2 196 aaKnown RBP16.95■□□□□ 0.3
HDAC4-201ENST00000345617 CLDN16Q9Y5I7 305 aa16.95■□□□□ 0.3
HDAC4-201ENST00000345617 PHLDA3Q9Y5J5 127 aa16.95■□□□□ 0.3
HDAC4-201ENST00000345617 H7C2G1 150 aa16.95■□□□□ 0.3
HDAC4-201ENST00000345617 TRGC1P0CF51 173 aa16.95■□□□□ 0.3
HDAC4-201ENST00000345617 RPS4XP62701 263 aaKnown RBP16.95■□□□□ 0.3
HDAC4-201ENST00000345617 ASB5Q8WWX0 329 aa16.95■□□□□ 0.3
HDAC4-201ENST00000345617 SAMD13Q5VXD3 122 aa16.95■□□□□ 0.3
HDAC4-201ENST00000345617 ALKBH7Q9BT30 221 aaPredicted RBP16.95■□□□□ 0.3
HDAC4-201ENST00000345617 J3QR06 171 aa16.94■□□□□ 0.3
HDAC4-201ENST00000345617 HERPUD1Q15011 391 aa16.94■□□□□ 0.3
HDAC4-201ENST00000345617 MIXL1Q9H2W2 232 aa16.94■□□□□ 0.3
HDAC4-201ENST00000345617 DANCRP0C864 163 aa16.94■□□□□ 0.3
HDAC4-201ENST00000345617 LYZL2Q7Z4W2 148 aa16.94■□□□□ 0.3
HDAC4-201ENST00000345617 MPLP40238 635 aa16.94■□□□□ 0.3
HDAC4-201ENST00000345617 SSPNQ14714 243 aa16.94■□□□□ 0.3
HDAC4-201ENST00000345617 SARGQ9BW04 601 aa16.94■□□□□ 0.3
HDAC4-201ENST00000345617 GUCA2BQ16661 112 aa16.94■□□□□ 0.3
HDAC4-201ENST00000345617 OR4A5Q8NH83 315 aa16.94■□□□□ 0.3
HDAC4-201ENST00000345617 RPL36A-HNRNPH2H7BZ11 118 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 CA7P43166 264 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 LINC01559Q495D7 138 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 PTCRAQ6ISU1 281 aaPredicted RBP16.93■□□□□ 0.3
HDAC4-201ENST00000345617 OR10J6PQ8NGY7 276 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 TMUB1Q9BVT8 246 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 NUP37Q8NFH4 326 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 FBXO17Q96EF6 278 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 KIAA0040Q15053 153 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 RIPPLY2Q5TAB7 128 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 C2orf88Q9BSF0 95 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 ABHD14AQ9BUJ0 271 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 FAM117AQ9C073 453 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 A1L4Q6 167 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 FAM90A10PA6NDY2 464 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 FAM90A18PA6NE21 464 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 FAM90A16PA6NEW6 464 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 FAM90A20PA6NIJ5 464 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 FAM90A8PA6NJQ4 464 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 FAM90A7PA6NKC0 464 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 FAM90A22PA8MWA6 464 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 FAM90A12PA8MX19 464 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 FAM90A5PA8MXJ8 464 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 FAM90A23PA8MXZ1 464 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 PRRT4C9JH25 899 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 FAM90A15PP0C7V4 464 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 FAM90A13PP0C7W8 464 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 FAM90A14PP0C7W9 464 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 FAM90A24PP0C7X0 464 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 PCGF1Q9BSM1 259 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 KCNMB2Q9Y691 235 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 PXMP4Q9Y6I8 212 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 NHLRC3Q5JS37 347 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 ZNF506Q5JVG8 444 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 THSD4Q6ZMP0 1018 aa16.93■□□□□ 0.3
HDAC4-201ENST00000345617 SRFP11831 508 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 GFRALQ6UXV0 394 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 ZNF645Q8N7E2 425 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 RFESDQ8TAC1 157 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 AHDC1Q5TGY3 1603 aaPredicted RBP16.92■□□□□ 0.3
HDAC4-201ENST00000345617 LIPT2A6NK58 231 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 PSMG3Q9BT73 122 aaPredicted RBP16.92■□□□□ 0.3
HDAC4-201ENST00000345617 RBKSQ9H477 322 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 FOXJ2Q9P0K8 574 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 SPTY2D1-AS1A0A0U1RR47 76 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms