RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 DEGS1O15121 323 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 NXPH2O95156 264 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 OR8U8P0C7N1 319 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 CDX1P47902 265 aaPredicted RBP10.81□□□□□ -0.68
CLK3-201ENST00000345005 SELENOVP59797 346 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 HEPN1Q6WQI6 88 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 Q6ZS49 121 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 C22orf34Q6ZV56 151 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 FAM24BQ8N5W8 94 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 NEK7Q8TDX7 302 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 PLEKHF2Q9H8W4 249 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 MSL2Q9HCI7 577 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 KIAA1456Q9P272 454 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 FAM221AA4D161 298 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 RBFOX3A6NFN3 312 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 K7N7A8 449 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 PPIHO43447 177 aaKnown RBP10.81□□□□□ -0.68
CLK3-201ENST00000345005 PITX3O75364 302 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 OR5AC1P0C628 307 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 NQO2P16083 231 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 BAXQ07812 192 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 SPIN3Q5JUX0 258 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 OR10G4Q8NGN3 311 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 TMEM171Q8WVE6 324 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 MOB3AQ96BX8 217 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 RSRP1Q9BUV0 290 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 GFOD1Q9NXC2 390 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 PLCE1Q9P212 2302 aa10.81□□□□□ -0.68
CLK3-201ENST00000345005 ELOA3CA0A087WX78 387 aaPredicted RBP10.8□□□□□ -0.68
CLK3-201ENST00000345005 TRAV24A0A0B4J272 114 aa10.8□□□□□ -0.68
CLK3-201ENST00000345005 HS3ST1O14792 307 aa10.8□□□□□ -0.68
CLK3-201ENST00000345005 SH2D1BO14796 132 aa10.8□□□□□ -0.68
CLK3-201ENST00000345005 TXNL1O43396 289 aa10.8□□□□□ -0.68
CLK3-201ENST00000345005 NAPSAO96009 420 aa10.8□□□□□ -0.68
CLK3-201ENST00000345005 HSPB1P04792 205 aaKnown RBP10.8□□□□□ -0.68
CLK3-201ENST00000345005 HERV-K104P61576 105 aa10.8□□□□□ -0.68
CLK3-201ENST00000345005 ZNF146Q15072 292 aa10.8□□□□□ -0.68
CLK3-201ENST00000345005 SSX2Q16385 188 aa10.8□□□□□ -0.68
CLK3-201ENST00000345005 Q6P435 159 aa10.8□□□□□ -0.68
CLK3-201ENST00000345005 SLC22A25Q6T423 547 aa10.8□□□□□ -0.68
CLK3-201ENST00000345005 WFDC8Q8IUA0 241 aa10.8□□□□□ -0.68
CLK3-201ENST00000345005 C11orf53Q8IXP5 236 aa10.8□□□□□ -0.68
CLK3-201ENST00000345005 OR2C3Q8N628 320 aa10.8□□□□□ -0.68
CLK3-201ENST00000345005 NUP37Q8NFH4 326 aa10.8□□□□□ -0.68
CLK3-201ENST00000345005 MSI2Q96DH6 328 aaKnown RBP10.8□□□□□ -0.68
CLK3-201ENST00000345005 YPEL4Q96NS1 127 aa10.8□□□□□ -0.68
CLK3-201ENST00000345005 HES4Q9HCC6 221 aa10.8□□□□□ -0.68
CLK3-201ENST00000345005 NGBQ9NPG2 151 aa10.8□□□□□ -0.68
CLK3-201ENST00000345005 ICE1Q9Y2F5 2266 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 IGLV3-9A0A075B6K5 115 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 TRBV6-6A0A0A6YYG2 114 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 hCG_1809904A0A1W2PP81 198 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 A0A1W2PR64 198 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 A0A1W2PRV1 198 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 SEC14L6B5MCN3 397 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 GPR37O15354 613 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 HIST1H1BP16401 226 aaKnown RBP10.79□□□□□ -0.68
CLK3-201ENST00000345005 CD200P41217 278 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 ASCL1P50553 236 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 PKIAP61925 76 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 TLE4Q04727 773 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 KIAA0141Q14154 515 aaPredicted RBP10.79□□□□□ -0.68
CLK3-201ENST00000345005 HNF4GQ14541 408 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 MSMPQ1L6U9 139 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 VHLLQ6RSH7 139 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 SLC35E3Q7Z769 313 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 LRP11Q86VZ4 500 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 OR2Z1Q8NG97 314 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 OR4D5Q8NGN0 318 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 FAM213BQ8TBF2 198 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 WFDC1Q9HC57 220 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 Q9N2K0 584 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 SLC2A9Q9NRM0 540 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 CBY1Q9Y3M2 126 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 CCL21O00585 134 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 THBDP07204 575 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 PAX1P15863 534 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 MDH2P40926 338 aaKnown RBP10.79□□□□□ -0.68
CLK3-201ENST00000345005 AKR1C3P42330 323 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 RND3P61587 244 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 EWSR1Q01844 656 aaKnown RBP eCLIP10.79□□□□□ -0.683e-7■□□□□ 11.1
CLK3-201ENST00000345005 WDR82Q6UXN9 313 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 ETV3LQ6ZN32 361 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 LYZL2Q7Z4W2 148 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 OR2G3Q8NGZ4 309 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 RDH5Q92781 318 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 TOMM40LQ969M1 308 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 ISOC2Q96AB3 205 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 C14orf144Q96I85 54 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 LURAP1Q96LR2 239 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 GAR1Q9NY12 217 aaKnown RBP10.79□□□□□ -0.68
CLK3-201ENST00000345005 RCL1Q9Y2P8 373 aaKnown RBP10.79□□□□□ -0.68
CLK3-201ENST00000345005 FBXO7Q9Y3I1 522 aa10.79□□□□□ -0.68
CLK3-201ENST00000345005 IGSF10Q6WRI0 2623 aa10.78□□□□□ -0.68
CLK3-201ENST00000345005 IGHV3-64DA0A0J9YX35 117 aa10.78□□□□□ -0.68
CLK3-201ENST00000345005 KIR2DS1A0A191URI9 304 aa10.78□□□□□ -0.68
CLK3-201ENST00000345005 HSPB6O14558 160 aa10.78□□□□□ -0.68
CLK3-201ENST00000345005 PTBP3O95758 552 aaKnown RBP10.78□□□□□ -0.68
CLK3-201ENST00000345005 OR2H2O95918 312 aa10.78□□□□□ -0.68
CLK3-201ENST00000345005 CHRNB4P30926 498 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms