RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 IGFL2Q6UWQ7 119 aa12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 LILRB2Q8N423 598 aa12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 HIST1H2BAQ96A08 127 aa12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 DCTN5Q9BTE1 182 aa12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 HEATR1Q9H583 2144 aaKnown RBP12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 IGHV2OR16-5A0A0B4J2B6 119 aa12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 IGHV1-18A0A0C4DH31 117 aa12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 ATXN7O15265 892 aaPredicted RBP12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 NINJ1Q92982 152 aa12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 DUSP13Q9UII6 198 aa12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 PROCRQ9UNN8 238 aa12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 ZNF318Q5VUA4 2279 aa12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 USF3Q68DE3 2245 aa12.49□□□□□ -0.41
VIPAS39-202ENST00000343765 PCP4L1A6NKN8 68 aa12.49□□□□□ -0.41
VIPAS39-202ENST00000343765 OR8G2PQ6IF36 304 aa12.49□□□□□ -0.41
VIPAS39-202ENST00000343765 ZNF645Q8N7E2 425 aa12.49□□□□□ -0.41
VIPAS39-202ENST00000343765 SCGB1C1Q8TD33 95 aa12.49□□□□□ -0.41
VIPAS39-202ENST00000343765 VSIRQ9H7M9 311 aa12.49□□□□□ -0.41
VIPAS39-202ENST00000343765 OR5H1A6NKK0 313 aa12.49□□□□□ -0.41
VIPAS39-202ENST00000343765 NDUFA2O43678 99 aa12.49□□□□□ -0.41
VIPAS39-202ENST00000343765 TNFSF13O75888 250 aa12.49□□□□□ -0.41
VIPAS39-202ENST00000343765 CLDN1O95832 211 aa12.49□□□□□ -0.41
VIPAS39-202ENST00000343765 ZNF718Q3SXZ3 478 aa12.49□□□□□ -0.41
VIPAS39-202ENST00000343765 HAPLN4Q86UW8 402 aa12.49□□□□□ -0.41
VIPAS39-202ENST00000343765 C15orf54Q8N8G6 183 aa12.49□□□□□ -0.41
VIPAS39-202ENST00000343765 OR2Z1Q8NG97 314 aa12.49□□□□□ -0.41
VIPAS39-202ENST00000343765 TCTEX1D2Q8WW35 142 aa12.49□□□□□ -0.41
VIPAS39-202ENST00000343765 STARD4Q96DR4 205 aa12.49□□□□□ -0.41
VIPAS39-202ENST00000343765 DKK4Q9UBT3 224 aa12.49□□□□□ -0.41
VIPAS39-202ENST00000343765 PIGBOS1A0A0B4J2F0 54 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 hCG_1809904A0A1W2PP81 198 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 A0A1W2PR64 198 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 A0A1W2PRV1 198 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 OOEPA6NGQ2 149 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 RPS16P62249 146 aaKnown RBP12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 FAM24BQ8N5W8 94 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 OR13A1Q8NGR1 328 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 LRRC29Q8WV35 223 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 KIAA1456Q9P272 454 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 RNF212BA8MTL3 300 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 S1PR2O95136 353 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 ZNF83P51522 516 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 TLE4Q04727 773 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 SLC35E4Q6ICL7 350 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 LCN15Q6UWW0 184 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 BHLHA15Q7RTS1 189 aaPredicted RBP12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 LRP11Q86VZ4 500 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 ZNF525Q8N782 197 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 CYB561D1Q8N8Q1 229 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 C1orf162Q8NEQ5 155 aaPredicted RBP12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 BIN3Q9NQY0 253 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 PLSCR4Q9NRQ2 329 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 GNG13Q9P2W3 67 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 ACACAQ13085 2346 aa12.48□□□□□ -0.41
VIPAS39-202ENST00000343765 CEACAM1P13688 526 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 HOXB1P14653 301 aaPredicted RBP12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 PLA2G5P39877 138 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 FGF8P55075 233 aaPredicted RBP12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 ELLP55199 621 aaPredicted RBP12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 UBE2KP61086 200 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 HABP2Q14520 560 aaPredicted RBP12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 SPINK9Q5DT21 86 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 VHLLQ6RSH7 139 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 LINC00518Q8N0U6 118 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 RPRMLQ8N4K4 120 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 ZNF71Q9NQZ8 489 aaPredicted RBP12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 UBE2L5PA0A1B0GUS4 154 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 C17orf98A8MV24 154 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 ST8SIA5O15466 376 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 WNT2P09544 360 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 ICAM4Q14773 271 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 SMIM21Q3B7S5 101 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 SEM1Q6ZVN7 128 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 RBKSQ9H477 322 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 RPRMQ9NS64 109 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 IGHV3-13P01766 116 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 IGHV3-7P01780 117 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 KITLGP21583 273 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 CD200P41217 278 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 MSMPQ1L6U9 139 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 CD177Q8N6Q3 437 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 CLN8Q9UBY8 286 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 PSG11Q9UQ72 335 aa12.47□□□□□ -0.41
VIPAS39-202ENST00000343765 IGHV3OR15-7A0A075B7D8 119 aa12.46□□□□□ -0.41
VIPAS39-202ENST00000343765 A0A1B0GW64 132 aa12.46□□□□□ -0.41
VIPAS39-202ENST00000343765 BTBD17A6NE02 478 aa12.46□□□□□ -0.41
VIPAS39-202ENST00000343765 ZFP92A6NM28 416 aa12.46□□□□□ -0.41
VIPAS39-202ENST00000343765 RBMXL2O75526 392 aaKnown RBP12.46□□□□□ -0.41
VIPAS39-202ENST00000343765 SCAF4O95104 1147 aaKnown RBP12.46□□□□□ -0.41
VIPAS39-202ENST00000343765 SRP19P09132 144 aaKnown RBP12.46□□□□□ -0.41
VIPAS39-202ENST00000343765 EGR1P18146 543 aa12.46□□□□□ -0.41
VIPAS39-202ENST00000343765 RAB5BP61020 215 aa12.46□□□□□ -0.41
VIPAS39-202ENST00000343765 HBG1P69891 147 aa12.46□□□□□ -0.41
VIPAS39-202ENST00000343765 HBG2P69892 147 aa12.46□□□□□ -0.41
VIPAS39-202ENST00000343765 TNFRSF9Q07011 255 aa12.46□□□□□ -0.41
VIPAS39-202ENST00000343765 Q3ZCU0 254 aa12.46□□□□□ -0.41
VIPAS39-202ENST00000343765 MMP24Q9Y5R2 645 aa12.46□□□□□ -0.41
VIPAS39-202ENST00000343765 C1orf196B1AJZ1 125 aa12.46□□□□□ -0.42
VIPAS39-202ENST00000343765 H3BQ15 152 aa12.46□□□□□ -0.42
VIPAS39-202ENST00000343765 M0R1B8 84 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms