RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 PPIAL4FP0DN26 164 aa16.58■□□□□ 0.24
RTN1-202ENST00000342503 TPT1P13693 172 aaKnown RBP16.58■□□□□ 0.24
RTN1-202ENST00000342503 LOXP28300 417 aaPredicted RBP16.58■□□□□ 0.24
RTN1-202ENST00000342503 RPL30P62888 115 aaKnown RBP16.58■□□□□ 0.24
RTN1-202ENST00000342503 TFF3Q07654 80 aa16.58■□□□□ 0.24
RTN1-202ENST00000342503 CXorf66Q5JRM2 361 aaPredicted RBP16.58■□□□□ 0.24
RTN1-202ENST00000342503 BTNL3Q6UXE8 466 aa16.58■□□□□ 0.24
RTN1-202ENST00000342503 COMMD7Q86VX2 200 aa16.58■□□□□ 0.24
RTN1-202ENST00000342503 FGFRL1Q8N441 504 aa16.58■□□□□ 0.24
RTN1-202ENST00000342503 PPIAL4AQ9Y536 164 aa16.58■□□□□ 0.24
RTN1-202ENST00000342503 YPEL1O60688 119 aa16.57■□□□□ 0.24
RTN1-202ENST00000342503 EPHA1P21709 976 aa16.57■□□□□ 0.24
RTN1-202ENST00000342503 OMGP23515 440 aa16.57■□□□□ 0.24
RTN1-202ENST00000342503 P2RY1P47900 373 aa16.57■□□□□ 0.24
RTN1-202ENST00000342503 LOXL3P58215 753 aa16.57■□□□□ 0.24
RTN1-202ENST00000342503 POLR2GP62487 172 aaKnown RBP eCLIP16.57■□□□□ 0.24
RTN1-202ENST00000342503 SWI5Q1ZZU3 235 aa16.57■□□□□ 0.24
RTN1-202ENST00000342503 ZNF672Q499Z4 452 aaPredicted RBP16.57■□□□□ 0.24
RTN1-202ENST00000342503 FAM74A1Q5RGS3 127 aa16.57■□□□□ 0.24
RTN1-202ENST00000342503 RNASE11Q8TAA1 199 aaKnown RBP16.57■□□□□ 0.24
RTN1-202ENST00000342503 EDARADDQ8WWZ3 215 aa16.57■□□□□ 0.24
RTN1-202ENST00000342503 LSM10Q969L4 123 aaKnown RBP16.57■□□□□ 0.24
RTN1-202ENST00000342503 CXorf58Q96LI9 332 aa16.57■□□□□ 0.24
RTN1-202ENST00000342503 YPEL2Q96QA6 119 aa16.57■□□□□ 0.24
RTN1-202ENST00000342503 AGMATQ9BSE5 352 aa16.57■□□□□ 0.24
RTN1-202ENST00000342503 C11orf1Q9H5F2 150 aa16.57■□□□□ 0.24
RTN1-202ENST00000342503 SDHAF2Q9NX18 166 aa16.57■□□□□ 0.24
RTN1-202ENST00000342503 ARFGEF3Q5TH69 2177 aa16.57■□□□□ 0.24
RTN1-202ENST00000342503 TRGV10A0A0A0MS01 117 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 TAAR5O14804 337 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 TMPRSS2O15393 492 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 GPR137BO60478 399 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 IGKV1-5P01602 117 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 LPAR6P43657 344 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 TCF23Q7RTU1 214 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 BAP18Q8IXM2 172 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 MAGT1Q9H0U3 335 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 SLC25A32Q9H2D1 315 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 ITPR1Q14643 2758 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 KBTBD11-OT1A0A1B0GTJ5 212 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 A0A1B0GU03 582 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 NXPH3O95157 252 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 SLC25A6P12236 298 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 ID3Q02535 119 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 CATR1Q13166 79 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 IZUMO4Q1ZYL8 232 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 Q3ZCU0 254 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 CLEC9AQ6UXN8 241 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 MUC15Q8N387 334 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 FAM122AQ96E09 287 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 BSCL2Q96G97 398 aaPredicted RBP16.56■□□□□ 0.24
RTN1-202ENST00000342503 CLN8Q9UBY8 286 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 FBXL17Q9UF56 701 aa16.56■□□□□ 0.24
RTN1-202ENST00000342503 COL6A6A6NMZ7 2263 aa16.55■□□□□ 0.24
RTN1-202ENST00000342503 ROS1P08922 2347 aa16.55■□□□□ 0.24
RTN1-202ENST00000342503 PITX3O75364 302 aa16.55■□□□□ 0.24
RTN1-202ENST00000342503 RRASP10301 218 aa16.55■□□□□ 0.24
RTN1-202ENST00000342503 TMEM33P57088 247 aa16.55■□□□□ 0.24
RTN1-202ENST00000342503 OR2B11Q5JQS5 317 aa16.55■□□□□ 0.24
RTN1-202ENST00000342503 GPR157Q5UAW9 335 aa16.55■□□□□ 0.24
RTN1-202ENST00000342503 RPL7L1Q6DKI1 246 aaKnown RBP16.55■□□□□ 0.24
RTN1-202ENST00000342503 Q6ZRM9 215 aa16.55■□□□□ 0.24
RTN1-202ENST00000342503 PDZD9Q8IXQ8 264 aa16.55■□□□□ 0.24
RTN1-202ENST00000342503 TCTEX1D2Q8WW35 142 aa16.55■□□□□ 0.24
RTN1-202ENST00000342503 TMEM204Q9BSN7 226 aa16.55■□□□□ 0.24
RTN1-202ENST00000342503 SMIM3Q9BZL3 60 aa16.55■□□□□ 0.24
RTN1-202ENST00000342503 RAB9BQ9NP90 201 aa16.55■□□□□ 0.24
RTN1-202ENST00000342503 ADGRG4Q8IZF6 3080 aa16.54■□□□□ 0.24
RTN1-202ENST00000342503 SSSCA1O60232 199 aa16.54■□□□□ 0.24
RTN1-202ENST00000342503 RAMP3O60896 148 aa16.54■□□□□ 0.24
RTN1-202ENST00000342503 CLDN14O95500 239 aa16.54■□□□□ 0.24
RTN1-202ENST00000342503 CLDN1O95832 211 aa16.54■□□□□ 0.24
RTN1-202ENST00000342503 NDUFB7P17568 137 aa16.54■□□□□ 0.24
RTN1-202ENST00000342503 GPR12P47775 334 aa16.54■□□□□ 0.24
RTN1-202ENST00000342503 AKR1C2P52895 323 aa16.54■□□□□ 0.24
RTN1-202ENST00000342503 ZNF66Q6ZN08 573 aa16.54■□□□□ 0.24
RTN1-202ENST00000342503 CORO2AQ92828 525 aa16.54■□□□□ 0.24
RTN1-202ENST00000342503 GFOD1Q9NXC2 390 aa16.54■□□□□ 0.24
RTN1-202ENST00000342503 SLC25A10Q9UBX3 287 aaPredicted RBP16.54■□□□□ 0.24
RTN1-202ENST00000342503 IGHV1-69-2A0A0G2JMI3 117 aa16.53■□□□□ 0.24
RTN1-202ENST00000342503 C17orf98A8MV24 154 aa16.53■□□□□ 0.24
RTN1-202ENST00000342503 TNFRSF13BO14836 293 aaPredicted RBP16.53■□□□□ 0.24
RTN1-202ENST00000342503 IGHV3-7P01780 117 aa16.53■□□□□ 0.24
RTN1-202ENST00000342503 PVALBP20472 110 aaPredicted RBP16.53■□□□□ 0.24
RTN1-202ENST00000342503 UQCRFS1P47985 274 aa16.53■□□□□ 0.24
RTN1-202ENST00000342503 ZNF134P52741 427 aa16.53■□□□□ 0.24
RTN1-202ENST00000342503 UTF1Q5T230 341 aa16.53■□□□□ 0.24
RTN1-202ENST00000342503 FAM216AQ8WUB2 273 aa16.53■□□□□ 0.24
RTN1-202ENST00000342503 CACNG5Q9UF02 275 aa16.53■□□□□ 0.24
RTN1-202ENST00000342503 DIDO1Q9BTC0 2240 aaKnown RBP16.53■□□□□ 0.24
RTN1-202ENST00000342503 NBEAQ8NFP9 2946 aa16.53■□□□□ 0.24
RTN1-202ENST00000342503 ZNF729A6NN14 1252 aaPredicted RBP16.53■□□□□ 0.24
RTN1-202ENST00000342503 LINC00473A8K010 186 aa16.53■□□□□ 0.24
RTN1-202ENST00000342503 BRWD1-AS2P59051 145 aa16.53■□□□□ 0.24
RTN1-202ENST00000342503 ZNF816Q0VGE8 651 aaPredicted RBP16.53■□□□□ 0.24
RTN1-202ENST00000342503 LYPD2Q6UXB3 125 aa16.53■□□□□ 0.24
RTN1-202ENST00000342503 SPAG16Q8N0X2 631 aa16.53■□□□□ 0.24
RTN1-202ENST00000342503 LEAP2Q969E1 77 aa16.53■□□□□ 0.24
RTN1-202ENST00000342503 HSD17B10Q99714 261 aaKnown RBP16.53■□□□□ 0.24
RTN1-202ENST00000342503 IDI2-AS1Q9NZ38 188 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms