RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 DLX1P56177 255 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 EIF5AL1Q6IS14 154 aaKnown RBP8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 Q6ZRM9 215 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 TMEM171Q8WVE6 324 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 ABHD14AQ9BUJ0 271 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 BSNQ9UPA5 3926 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 PLXNB1O43157 2135 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 IGKV1D-17A0A075B6S4 117 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 LY6HO94772 140 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 CLDN14O95500 239 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 RPL30P62888 115 aaKnown RBP8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 SRPXP78539 464 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 AQP10Q96PS8 301 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 CLN8Q9UBY8 286 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 ZDHHC8Q9ULC8 765 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 C17orf98A8MV24 154 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 GLRXP35754 106 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 MDH2P40926 338 aaKnown RBP8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 EIF5AP63241 154 aaKnown RBP8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 MIDNQ504T8 468 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 STX12Q86Y82 276 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 LYG1Q8N1E2 194 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 STOML3Q8TAV4 291 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 CD300LFQ8TDQ1 290 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 GFOD1Q9NXC2 390 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 ODAMA1E959 279 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 OOEPA6NGQ2 149 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 SOX15O60248 233 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 ERVK11-1P61568 191 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 ZNF146Q15072 292 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 EIF2S3LQ2VIR3 472 aaKnown RBP8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 LINC00596Q86U02 117 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 THNSL2Q86YJ6 484 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 FAM185AQ8N0U4 392 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 WFIKKN1Q96NZ8 548 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 SAP30LQ9HAJ7 183 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 LIN7CQ9NUP9 197 aaKnown RBP8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 ARHGAP32A7KAX9 2087 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 DPRXA6NFQ7 191 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 GPR137BO60478 399 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 POMT1Q9Y6A1 747 aa8.51□□□□□ -1.05
RBFOX1-202ENST00000340209 C1QTNF9BB2RNN3 333 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 K7ENP7 123 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 PLAUP00749 431 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 IGLV1-44P01699 117 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 IGHV1-46P01743 117 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 C1QTNF9P0C862 333 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 MOB1BQ7L9L4 216 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 PPP1R35Q8TAP8 253 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 PRR7Q8TB68 274 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 ZDHHC16Q969W1 377 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 REG4Q9BYZ8 158 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 PSENENQ9NZ42 101 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 H0Y980 276 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 JTBO76095 146 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 TMEM50AO95807 157 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 KITLGP21583 273 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 TIMP3P35625 211 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 UCP3P55916 312 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 TMPRSS3P57727 454 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 RPS23P62266 143 aaKnown RBP8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 RPL23AP62750 156 aaKnown RBP8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 FAM76BQ5HYJ3 339 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 IGF2-ASQ6U949 168 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 PLEKHA2Q9HB19 425 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 RNF7Q9UBF6 113 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 DSCAMO60469 2012 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 M0R036 132 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 CDS2O95674 445 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 OR13C7P0DN81 318 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 HOXB1P14653 301 aaPredicted RBP8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 HAGHQ16775 308 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 PRAMEF5Q5TYX0 476 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 H2BFWTQ7Z2G1 175 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 FAM90A1Q86YD7 464 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 TMEM252Q8N6L7 170 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 DHRS9Q9BPW9 319 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 RSG1Q9BU20 258 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 RHOFQ9HBH0 211 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 KCNJ16Q9NPI9 418 aa8.5□□□□□ -1.05
RBFOX1-202ENST00000340209 UBE2L5PA0A1B0GUS4 154 aa8.49□□□□□ -1.05
RBFOX1-202ENST00000340209 CATR1Q13166 79 aa8.49□□□□□ -1.05
RBFOX1-202ENST00000340209 GUCA2BQ16661 112 aa8.49□□□□□ -1.05
RBFOX1-202ENST00000340209 LPAR3Q9UBY5 353 aa8.49□□□□□ -1.05
RBFOX1-202ENST00000340209 TUBD1Q9UJT1 453 aa8.49□□□□□ -1.05
RBFOX1-202ENST00000340209 NUP50Q9UKX7 468 aa8.49□□□□□ -1.05
RBFOX1-202ENST00000340209 POLQO75417 2590 aa8.49□□□□□ -1.05
RBFOX1-202ENST00000340209 SLC31A2O15432 143 aa8.49□□□□□ -1.05
RBFOX1-202ENST00000340209 UCP1P25874 307 aa8.49□□□□□ -1.05
RBFOX1-202ENST00000340209 MZT1Q08AG7 82 aa8.49□□□□□ -1.05
RBFOX1-202ENST00000340209 Q8NFD4 153 aa8.49□□□□□ -1.05
RBFOX1-202ENST00000340209 GCM1Q9NP62 436 aa8.49□□□□□ -1.05
RBFOX1-202ENST00000340209 IGKV1-39P01597 117 aa8.49□□□□□ -1.05
RBFOX1-202ENST00000340209 IGKV1D-39P04432 117 aa8.49□□□□□ -1.05
RBFOX1-202ENST00000340209 FGF8P55075 233 aaPredicted RBP8.49□□□□□ -1.05
RBFOX1-202ENST00000340209 SRSF4Q08170 494 aaKnown RBP8.49□□□□□ -1.05
RBFOX1-202ENST00000340209 LCN15Q6UWW0 184 aa8.49□□□□□ -1.05
RBFOX1-202ENST00000340209 SFT2D1Q8WV19 159 aa8.49□□□□□ -1.05
RBFOX1-202ENST00000340209 FAM212BQ9NTI7 297 aaPredicted RBP8.49□□□□□ -1.05
RBFOX1-202ENST00000340209 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms