RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ZNF714Q96N38 554 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 BEX4Q9NWD9 120 aaPredicted RBP11.37□□□□□ -0.59
HLCS-201ENST00000336648 RREB1Q92766 1687 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 TRAV30A0A087WSZ9 112 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 CXorf65A6NEN9 183 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 CKS2P33552 79 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 OR4D11Q8NGI4 311 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 PLAC1Q9HBJ0 212 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 JKAMPQ9P055 326 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 SDK1Q7Z5N4 2213 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 WNT9BO14905 357 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 PIGYQ3MUY2 71 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 TMEM91Q6ZNR0 172 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 ADAD2Q8NCV1 583 aaKnown RBP11.37□□□□□ -0.59
HLCS-201ENST00000336648 HDHD3Q9BSH5 251 aaPredicted RBP11.37□□□□□ -0.59
HLCS-201ENST00000336648 ATP5IP56385 69 aaPredicted RBP11.37□□□□□ -0.59
HLCS-201ENST00000336648 ROM1Q03395 351 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 KRTCAP3Q53RY4 240 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 MMD2Q8IY49 270 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 ELF5Q9UKW6 265 aaPredicted RBP11.37□□□□□ -0.59
HLCS-201ENST00000336648 DDX60LQ5H9U9 1706 aaKnown RBP11.37□□□□□ -0.59
HLCS-201ENST00000336648 MOSPD3O75425 235 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 TRGC2P03986 189 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 CCL3P10147 92 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 ZNF418Q8TF45 676 aaPredicted RBP11.37□□□□□ -0.59
HLCS-201ENST00000336648 CBLN4Q9NTU7 201 aa11.37□□□□□ -0.59
HLCS-201ENST00000336648 DLL1O00548 723 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 DXOO77932 396 aaKnown RBP11.36□□□□□ -0.59
HLCS-201ENST00000336648 GPR6P46095 362 aaPredicted RBP11.36□□□□□ -0.59
HLCS-201ENST00000336648 OR4A5Q8NH83 315 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 RARRES2Q99969 163 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 C19orf24Q9BVV8 132 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 PGPEP1Q9NXJ5 209 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 ALS2Q96Q42 1657 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 CACNG7P62955 275 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 DCAF10Q5QP82 559 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 C1orf185Q5T7R7 199 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 SPNS2Q8IVW8 549 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 CITED2Q99967 270 aaPredicted RBP11.36□□□□□ -0.59
HLCS-201ENST00000336648 PXMP4Q9Y6I8 212 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 A0A1W2PPC1 479 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 IGHV3-13P01766 116 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 IGHV3-7P01780 117 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 CELA2BP08218 269 aaPredicted RBP11.36□□□□□ -0.59
HLCS-201ENST00000336648 FAM106CPP0CH98 169 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 COL10A1Q03692 680 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 MDP1Q86V88 176 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 A0A1B0GWB2 263 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 C17orf51A8MQB3 221 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 IGHV4-34P06331 123 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 METTL26Q96S19 204 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 IGHV5-10-1A0A0J9YXX1 117 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 CEACAM18A8MTB9 384 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 WNT5AP41221 380 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 NRIP2Q9BQI9 281 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 SFXN3Q9BWM7 321 aa11.36□□□□□ -0.59
HLCS-201ENST00000336648 A0A1W2PPV9 198 aa11.35□□□□□ -0.59
HLCS-201ENST00000336648 A1L4Q6 167 aa11.35□□□□□ -0.59
HLCS-201ENST00000336648 SLC17A3O00476 420 aa11.35□□□□□ -0.59
HLCS-201ENST00000336648 PSG9Q00887 426 aa11.35□□□□□ -0.59
HLCS-201ENST00000336648 TMEM45BQ96B21 275 aa11.35□□□□□ -0.59
HLCS-201ENST00000336648 MRPL18Q9H0U6 180 aaKnown RBP11.35□□□□□ -0.59
HLCS-201ENST00000336648 MRPL16Q9NX20 251 aaKnown RBP11.35□□□□□ -0.59
HLCS-201ENST00000336648 LOXL3P58215 753 aa11.35□□□□□ -0.59
HLCS-201ENST00000336648 ZNF645Q8N7E2 425 aa11.35□□□□□ -0.59
HLCS-201ENST00000336648 RPP25Q9BUL9 199 aaKnown RBP11.35□□□□□ -0.59
HLCS-201ENST00000336648 PKIBQ9C010 78 aa11.35□□□□□ -0.59
HLCS-201ENST00000336648 C5orf67F2Z3F1 127 aa11.35□□□□□ -0.59
HLCS-201ENST00000336648 HIKESHIQ53FT3 197 aa11.35□□□□□ -0.59
HLCS-201ENST00000336648 NIT1Q86X76 327 aa11.35□□□□□ -0.59
HLCS-201ENST00000336648 ZNF721Q8TF20 911 aa11.35□□□□□ -0.59
HLCS-201ENST00000336648 TMEM222Q9H0R3 208 aa11.35□□□□□ -0.59
HLCS-201ENST00000336648 PRR13Q9NZ81 148 aa11.35□□□□□ -0.59
HLCS-201ENST00000336648 TREM2Q9NZC2 230 aa11.35□□□□□ -0.59
HLCS-201ENST00000336648 KLK13Q9UKR3 277 aa11.35□□□□□ -0.59
HLCS-201ENST00000336648 CD160O95971 181 aa11.35□□□□□ -0.59
HLCS-201ENST00000336648 IBA57Q5T440 356 aaKnown RBP11.35□□□□□ -0.59
HLCS-201ENST00000336648 LINC00518Q8N0U6 118 aa11.35□□□□□ -0.59
HLCS-201ENST00000336648 A0A1W2PRD5 423 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 A0A1W2PRF3 423 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 A0A1W2PRM7 423 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 MEX3AA1L020 520 aaKnown RBP11.34□□□□□ -0.59
HLCS-201ENST00000336648 LIPFP07098 398 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 SIGLEC14Q08ET2 396 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 ECSCRQ19T08 205 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 C9orf40Q8IXQ3 194 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 SAXO1Q8IYX7 474 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 ANAPC13Q9BS18 74 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 AURKAIP1Q9NWT8 199 aaPredicted RBP11.34□□□□□ -0.59
HLCS-201ENST00000336648 GON4LQ3T8J9 2241 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 C7orf71A4D174 169 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 MDKP21741 143 aaPredicted RBP11.34□□□□□ -0.59
HLCS-201ENST00000336648 OR10AG1Q8NH19 301 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 LINC00470Q9BZP3 86 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 CLDN14O95500 239 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 ASAH2BP0C7U1 165 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 ZNF79Q15937 498 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 TMEM95Q3KNT9 176 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 PRELID3AQ96N28 172 aa11.34□□□□□ -0.59
HLCS-201ENST00000336648 DERL1Q9BUN8 251 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms