RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 HOXC12P31275 282 aa12.48□□□□□ -0.41
UBA1-201ENST00000335972 KIR2DL2P43627 348 aaPredicted RBP12.48□□□□□ -0.41
UBA1-201ENST00000335972 UBE2KP61086 200 aa12.48□□□□□ -0.41
UBA1-201ENST00000335972 RAB11AP62491 216 aa12.48□□□□□ -0.41
UBA1-201ENST00000335972 COA4Q9NYJ1 87 aa12.48□□□□□ -0.41
UBA1-201ENST00000335972 WSB1Q9Y6I7 421 aa12.48□□□□□ -0.41
UBA1-201ENST00000335972 ST8SIA5O15466 376 aa12.48□□□□□ -0.41
UBA1-201ENST00000335972 HBZP02008 142 aa12.48□□□□□ -0.41
UBA1-201ENST00000335972 HOXA1P49639 335 aaPredicted RBP12.48□□□□□ -0.41
UBA1-201ENST00000335972 HMGN3Q15651 99 aa12.48□□□□□ -0.41
UBA1-201ENST00000335972 LINC00596Q86U02 117 aa12.48□□□□□ -0.41
UBA1-201ENST00000335972 ZNF429Q86V71 674 aa12.48□□□□□ -0.41
UBA1-201ENST00000335972 C11orf53Q8IXP5 236 aa12.48□□□□□ -0.41
UBA1-201ENST00000335972 ZDHHC16Q969W1 377 aa12.48□□□□□ -0.41
UBA1-201ENST00000335972 OR4C12Q96R67 309 aa12.48□□□□□ -0.41
UBA1-201ENST00000335972 IGHV3OR15-7A0A075B7D8 119 aa12.47□□□□□ -0.41
UBA1-201ENST00000335972 C17orf98A8MV24 154 aa12.47□□□□□ -0.41
UBA1-201ENST00000335972 CECR9P0C854 216 aa12.47□□□□□ -0.41
UBA1-201ENST00000335972 RPS10P46783 165 aaKnown RBP12.47□□□□□ -0.41
UBA1-201ENST00000335972 FABP9Q0Z7S8 132 aa12.47□□□□□ -0.41
UBA1-201ENST00000335972 ZNF610Q8N9Z0 462 aa12.47□□□□□ -0.41
UBA1-201ENST00000335972 GNPNAT1Q96EK6 184 aaPredicted RBP12.47□□□□□ -0.41
UBA1-201ENST00000335972 TREM2Q9NZC2 230 aa12.47□□□□□ -0.41
UBA1-201ENST00000335972 POLEQ07864 2286 aa12.47□□□□□ -0.41
UBA1-201ENST00000335972 TRBV6-6A0A0A6YYG2 114 aa12.47□□□□□ -0.41
UBA1-201ENST00000335972 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.47□□□□□ -0.41
UBA1-201ENST00000335972 S1PR2O95136 353 aa12.47□□□□□ -0.41
UBA1-201ENST00000335972 BMP5P22003 454 aa12.47□□□□□ -0.41
UBA1-201ENST00000335972 ZNF726P1Q15940 193 aa12.47□□□□□ -0.41
UBA1-201ENST00000335972 SPRNQ5BIV9 151 aa12.47□□□□□ -0.41
UBA1-201ENST00000335972 LRP11Q86VZ4 500 aa12.47□□□□□ -0.41
UBA1-201ENST00000335972 NANPQ8TBE9 248 aa12.47□□□□□ -0.41
UBA1-201ENST00000335972 TCTEX1D2Q8WW35 142 aa12.47□□□□□ -0.41
UBA1-201ENST00000335972 KCNIP1Q9NZI2 227 aa12.47□□□□□ -0.41
UBA1-201ENST00000335972 CLCF1Q9UBD9 225 aa12.47□□□□□ -0.41
UBA1-201ENST00000335972 ACACAQ13085 2346 aa12.47□□□□□ -0.41
UBA1-201ENST00000335972 PRSS44E7EML9 344 aa12.46□□□□□ -0.41
UBA1-201ENST00000335972 MT-ND4LP03901 98 aa12.46□□□□□ -0.41
UBA1-201ENST00000335972 ACAA1P09110 424 aaPredicted RBP12.46□□□□□ -0.41
UBA1-201ENST00000335972 ZNF806P0C7X5 589 aa12.46□□□□□ -0.41
UBA1-201ENST00000335972 DLK1P80370 383 aa12.46□□□□□ -0.41
UBA1-201ENST00000335972 BAXQ07812 192 aa12.46□□□□□ -0.41
UBA1-201ENST00000335972 NCMAPQ5T1S8 102 aa12.46□□□□□ -0.41
UBA1-201ENST00000335972 WDR31Q8NA23 367 aa12.46□□□□□ -0.41
UBA1-201ENST00000335972 COQ2Q96H96 371 aa12.46□□□□□ -0.41
UBA1-201ENST00000335972 PKDREJQ9NTG1 2253 aa12.46□□□□□ -0.41
UBA1-201ENST00000335972 RAC2P15153 192 aa12.46□□□□□ -0.41
UBA1-201ENST00000335972 SSX9Q7RTT3 188 aa12.46□□□□□ -0.41
UBA1-201ENST00000335972 RPRMLQ8N4K4 120 aa12.46□□□□□ -0.41
UBA1-201ENST00000335972 OR13A1Q8NGR1 328 aa12.46□□□□□ -0.41
UBA1-201ENST00000335972 CLDND2Q8NHS1 167 aa12.46□□□□□ -0.41
UBA1-201ENST00000335972 KALRNO60229 2985 aa12.46□□□□□ -0.42
UBA1-201ENST00000335972 DUXBA0A1W2PPF3 345 aa12.46□□□□□ -0.42
UBA1-201ENST00000335972 COL10A1Q03692 680 aa12.46□□□□□ -0.42
UBA1-201ENST00000335972 FAM201AQ5SY85 155 aa12.46□□□□□ -0.42
UBA1-201ENST00000335972 ZNF525Q8N782 197 aa12.46□□□□□ -0.42
UBA1-201ENST00000335972 LFNGQ8NES3 379 aa12.46□□□□□ -0.42
UBA1-201ENST00000335972 GALMQ96C23 342 aa12.46□□□□□ -0.42
UBA1-201ENST00000335972 POM121Q96HA1 1249 aa12.46□□□□□ -0.42
UBA1-201ENST00000335972 TMPRSS5Q9H3S3 457 aa12.46□□□□□ -0.42
UBA1-201ENST00000335972 RBKSQ9H477 322 aa12.46□□□□□ -0.42
UBA1-201ENST00000335972 PARD6AQ9NPB6 346 aa12.46□□□□□ -0.42
UBA1-201ENST00000335972 PSG11Q9UQ72 335 aa12.46□□□□□ -0.42
UBA1-201ENST00000335972 ANKRD11Q6UB99 2663 aaPredicted RBP12.46□□□□□ -0.42
UBA1-201ENST00000335972 FTH1P19P0C7X4 201 aa12.45□□□□□ -0.42
UBA1-201ENST00000335972 MDKP21741 143 aaPredicted RBP12.45□□□□□ -0.42
UBA1-201ENST00000335972 ZNF146Q15072 292 aa12.45□□□□□ -0.42
UBA1-201ENST00000335972 Q6ZT83 130 aa12.45□□□□□ -0.42
UBA1-201ENST00000335972 IL22RA2Q969J5 263 aa12.45□□□□□ -0.42
UBA1-201ENST00000335972 RAB40CQ96S21 281 aa12.45□□□□□ -0.42
UBA1-201ENST00000335972 KIAA1456Q9P272 454 aa12.45□□□□□ -0.42
UBA1-201ENST00000335972 KLF2Q9Y5W3 355 aaPredicted RBP12.45□□□□□ -0.42
UBA1-201ENST00000335972 Q3ZCU0 254 aa12.45□□□□□ -0.42
UBA1-201ENST00000335972 ZNF787Q6DD87 383 aa12.45□□□□□ -0.42
UBA1-201ENST00000335972 OR2Z1Q8NG97 314 aa12.45□□□□□ -0.42
UBA1-201ENST00000335972 LIN7CQ9NUP9 197 aaKnown RBP12.45□□□□□ -0.42
UBA1-201ENST00000335972 TMEM30CPA0ZSE6 113 aa12.45□□□□□ -0.42
UBA1-201ENST00000335972 IQCF6A8MYZ5 107 aa12.45□□□□□ -0.42
UBA1-201ENST00000335972 TLE4Q04727 773 aa12.45□□□□□ -0.42
UBA1-201ENST00000335972 UTF1Q5T230 341 aa12.45□□□□□ -0.42
UBA1-201ENST00000335972 ZNF292O60281 2723 aa12.45□□□□□ -0.42
UBA1-201ENST00000335972 CXCL1P09341 107 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 MEOX2P50222 304 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 RAB2AP61019 212 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 MSMPQ1L6U9 139 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 WDR82Q6UXN9 313 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 LEAP2Q969E1 77 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 TGIF2-C20orf24A0A0A6YYL0 155 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 ZG16O60844 167 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 DFFBO76075 338 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 COL8A2P25067 703 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 MDH2P40926 338 aaKnown RBP12.44□□□□□ -0.42
UBA1-201ENST00000335972 ZNF83P51522 516 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 BRWD1-AS2P59051 145 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 VKORC1L1Q8N0U8 176 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 OR8G5Q8NG78 346 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 LOXL4Q96JB6 756 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 MBNL3Q9NUK0 354 aaKnown RBP12.44□□□□□ -0.42
UBA1-201ENST00000335972 EGR1P18146 543 aa12.44□□□□□ -0.42
UBA1-201ENST00000335972 SLC38A11Q08AI6 406 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms