RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 MMP24Q9Y5R2 645 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 NBEAQ8NFP9 2946 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 DMXL1Q9Y485 3027 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 INTS1Q8N201 2190 aaKnown RBP14.87□□□□□ -0.03
LRCH3-201ENST00000334859 USF3Q68DE3 2245 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 ZNF98A6NK75 572 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 PTBP3O95758 552 aaKnown RBP14.87□□□□□ -0.03
LRCH3-201ENST00000334859 CLDN1O95832 211 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 S100A6P06703 90 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 ACAA1P09110 424 aaPredicted RBP14.87□□□□□ -0.03
LRCH3-201ENST00000334859 GCH1P30793 250 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 UBE2KP61086 200 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 RPS23P62266 143 aaKnown RBP14.87□□□□□ -0.03
LRCH3-201ENST00000334859 ACSF3Q4G176 576 aaPredicted RBP14.87□□□□□ -0.03
LRCH3-201ENST00000334859 SLC35E4Q6ICL7 350 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 Q6ZR03 302 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 TPRX1Q8N7U7 411 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 C12orf57Q99622 126 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 RPRMQ9NS64 109 aa14.87□□□□□ -0.03
LRCH3-201ENST00000334859 OR2C1O95371 312 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 HSPB1P04792 205 aaKnown RBP14.86□□□□□ -0.03
LRCH3-201ENST00000334859 SSTR5P35346 364 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 G6PCP35575 357 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 SMIM21Q3B7S5 101 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 OR8G2PQ6IF36 304 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 BTNL3Q6UXE8 466 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 RAB39BQ96DA2 213 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 C5orf30Q96GV9 206 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 VSIRQ9H7M9 311 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 IFNA4P05014 189 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 RPL30P62888 115 aaKnown RBP14.86□□□□□ -0.03
LRCH3-201ENST00000334859 CATR1Q13166 79 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 DEFB109BQ30KR1 87 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 ZNF718Q3SXZ3 478 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 SP5Q6BEB4 398 aaPredicted RBP14.86□□□□□ -0.03
LRCH3-201ENST00000334859 IGFL2Q6UWQ7 119 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 LCN15Q6UWW0 184 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 ZNF429Q86V71 674 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 ZNF561Q8N587 486 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 TCTEX1D2Q8WW35 142 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 OPN3Q9H1Y3 402 aaPredicted RBP14.86□□□□□ -0.03
LRCH3-201ENST00000334859 PARD6AQ9NPB6 346 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 METRNQ9UJH8 293 aa14.86□□□□□ -0.03
LRCH3-201ENST00000334859 UBE2L5PA0A1B0GUS4 154 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 GLIPR1P48060 266 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 COL10A1Q03692 680 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 TNFRSF9Q07011 255 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 ALKBH2Q6NS38 261 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 ADAM5Q6NVV9 412 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 ZBTB34Q8NCN2 500 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 IGHV3-43A0A0B4J1X8 118 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 IGHV2OR16-5A0A0B4J2B6 119 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 ZFP92A6NM28 416 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 C1QTNF9BB2RNN3 333 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 FAM90A26D6RGX4 464 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 S1PR2O95136 353 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 IGHV3-43DP0DP04 118 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 KITLGP21583 273 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 OR2B8PP59922 312 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 SLC38A11Q08AI6 406 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 MSMO1Q15800 293 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 EIF2S3LQ2VIR3 472 aaKnown RBP14.85□□□□□ -0.03
LRCH3-201ENST00000334859 ZNF787Q6DD87 383 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 ZNF610Q8N9Z0 462 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 NIPSNAP3BQ9BS92 247 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 RBKSQ9H477 322 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 COA4Q9NYJ1 87 aa14.85□□□□□ -0.03
LRCH3-201ENST00000334859 AGAP20933 346 aa14.84□□□□□ -0.03
LRCH3-201ENST00000334859 TAGLN2P37802 199 aaKnown RBP14.84□□□□□ -0.03
LRCH3-201ENST00000334859 ELLP55199 621 aaPredicted RBP14.84□□□□□ -0.03
LRCH3-201ENST00000334859 KHDC3LQ587J8 217 aa14.84□□□□□ -0.03
LRCH3-201ENST00000334859 RFESDQ8TAC1 157 aa14.84□□□□□ -0.03
LRCH3-201ENST00000334859 OR4C12Q96R67 309 aa14.84□□□□□ -0.03
LRCH3-201ENST00000334859 PSMG3Q9BT73 122 aaPredicted RBP14.84□□□□□ -0.03
LRCH3-201ENST00000334859 HIPK2Q9H2X6 1198 aa14.84□□□□□ -0.03
LRCH3-201ENST00000334859 ZNF665Q9H7R5 613 aa14.84□□□□□ -0.03
LRCH3-201ENST00000334859 PROCRQ9UNN8 238 aa14.84□□□□□ -0.03
LRCH3-201ENST00000334859 HEATR1Q9H583 2144 aaKnown RBP14.84□□□□□ -0.03
LRCH3-201ENST00000334859 TRAV1-1A0A0B4J248 108 aa14.83□□□□□ -0.03
LRCH3-201ENST00000334859 IGHV1-18A0A0C4DH31 117 aa14.83□□□□□ -0.03
LRCH3-201ENST00000334859 LOC102723971A0A1B0GUV8 181 aa14.83□□□□□ -0.03
LRCH3-201ENST00000334859 ATXN7O15265 892 aaPredicted RBP14.83□□□□□ -0.03
LRCH3-201ENST00000334859 FGF8P55075 233 aaPredicted RBP14.83□□□□□ -0.03
LRCH3-201ENST00000334859 EDDM3AQ14507 147 aa14.83□□□□□ -0.03
LRCH3-201ENST00000334859 HNF4GQ14541 408 aa14.83□□□□□ -0.03
LRCH3-201ENST00000334859 LRRC75BQ2VPJ9 315 aa14.83□□□□□ -0.03
LRCH3-201ENST00000334859 OR13A1Q8NGR1 328 aa14.83□□□□□ -0.03
LRCH3-201ENST00000334859 LRRC29Q8WV35 223 aa14.83□□□□□ -0.03
LRCH3-201ENST00000334859 OR5H1A6NKK0 313 aa14.83□□□□□ -0.04
LRCH3-201ENST00000334859 C17orf98A8MV24 154 aa14.83□□□□□ -0.04
LRCH3-201ENST00000334859 DLK1P80370 383 aa14.83□□□□□ -0.04
LRCH3-201ENST00000334859 PRR7Q8TB68 274 aa14.83□□□□□ -0.04
LRCH3-201ENST00000334859 RCC1LQ96I51 464 aaKnown RBP14.83□□□□□ -0.04
LRCH3-201ENST00000334859 WDR61Q9GZS3 305 aaKnown RBP14.83□□□□□ -0.04
LRCH3-201ENST00000334859 HSPB7Q9UBY9 170 aa14.83□□□□□ -0.04
LRCH3-201ENST00000334859 A0A1W2PPE3 182 aa14.82□□□□□ -0.04
LRCH3-201ENST00000334859 ODAMA1E959 279 aa14.82□□□□□ -0.04
LRCH3-201ENST00000334859 ZNF727A8MUV8 499 aa14.82□□□□□ -0.04
LRCH3-201ENST00000334859 DEFB108AA8MXU0 73 aa14.82□□□□□ -0.04
LRCH3-201ENST00000334859 RBMXL2O75526 392 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms