RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 TEX29Q8N6K0 151 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 A0A1W2PPQ1 181 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 ADRB1P08588 477 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 ZNRF1Q8ND25 227 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 RNASE6Q93091 150 aaKnown RBP12.86□□□□□ -0.35
C9orf47-201ENST00000334490 SLC25A38Q96DW6 304 aa12.86□□□□□ -0.35
C9orf47-201ENST00000334490 RCC2Q9P258 522 aaKnown RBP12.86□□□□□ -0.35
C9orf47-201ENST00000334490 SSX7Q7RTT5 188 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 LRRC75AQ8NAA5 344 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 Q96M66 194 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 HSF4Q9ULV5 492 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 HMSDA8MTL9 139 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 LEUTXA8MZ59 168 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 WNT9BO14905 357 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 SMIM17P0DL12 118 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 HLA-GP17693 338 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 FAM78BQ5VT40 261 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 ABLIM2Q6H8Q1 611 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 COMMD1Q8N668 190 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 RALYQ9UKM9 306 aaKnown RBP12.85□□□□□ -0.35
C9orf47-201ENST00000334490 LIPFP07098 398 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 KIAA0141Q14154 515 aaPredicted RBP12.85□□□□□ -0.35
C9orf47-201ENST00000334490 ABHD12Q8N2K0 398 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 LEAP2Q969E1 77 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 ATP5SQ99766 215 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 TMEM106BQ9NUM4 274 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 OPN4Q9UHM6 478 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 hCG_38984A0A1B0GV85 526 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 RNASEK-C17orf49H0YIS7 233 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 FGF8P55075 233 aaPredicted RBP12.85□□□□□ -0.35
C9orf47-201ENST00000334490 LAIR2Q6ISS4 152 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 ZNF66Q6ZN08 573 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 WDR31Q8NA23 367 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 SNRNP40Q96DI7 357 aaKnown RBP12.85□□□□□ -0.35
C9orf47-201ENST00000334490 TCEAL7Q9BRU2 100 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 RSRP1Q9BUV0 290 aa12.85□□□□□ -0.35
C9orf47-201ENST00000334490 PPP1R2P9O14990 202 aa12.84□□□□□ -0.35
C9orf47-201ENST00000334490 FOXH1O75593 365 aa12.84□□□□□ -0.35
C9orf47-201ENST00000334490 SULT1A1P50225 295 aa12.84□□□□□ -0.35
C9orf47-201ENST00000334490 BATFQ16520 125 aa12.84□□□□□ -0.35
C9orf47-201ENST00000334490 PERPQ96FX8 193 aa12.84□□□□□ -0.35
C9orf47-201ENST00000334490 PSG7Q13046 419 aa12.84□□□□□ -0.35
C9orf47-201ENST00000334490 UNQ6494/PRO21346Q6UXR6 183 aa12.84□□□□□ -0.35
C9orf47-201ENST00000334490 SPRR3Q9UBC9 169 aa12.84□□□□□ -0.35
C9orf47-201ENST00000334490 WASHC3Q9Y3C0 194 aa12.84□□□□□ -0.35
C9orf47-201ENST00000334490 MMP24Q9Y5R2 645 aa12.84□□□□□ -0.35
C9orf47-201ENST00000334490 CELA3BP08861 270 aa12.84□□□□□ -0.35
C9orf47-201ENST00000334490 MUC1P15941 1255 aaPredicted RBP12.84□□□□□ -0.35
C9orf47-201ENST00000334490 FABP9Q0Z7S8 132 aa12.84□□□□□ -0.35
C9orf47-201ENST00000334490 RNF2Q99496 336 aa12.84□□□□□ -0.35
C9orf47-201ENST00000334490 TECRQ9NZ01 308 aaKnown RBP12.84□□□□□ -0.35
C9orf47-201ENST00000334490 KIF26BQ2KJY2 2108 aa12.84□□□□□ -0.35
C9orf47-201ENST00000334490 ZNF737O75373 536 aa12.83□□□□□ -0.35
C9orf47-201ENST00000334490 BMPERQ8N8U9 685 aa12.83□□□□□ -0.35
C9orf47-201ENST00000334490 OR4X1Q8NH49 305 aa12.83□□□□□ -0.35
C9orf47-201ENST00000334490 OR9G1Q8NH87 305 aa12.83□□□□□ -0.35
C9orf47-201ENST00000334490 METTL1Q9UBP6 276 aaKnown RBP12.83□□□□□ -0.35
C9orf47-201ENST00000334490 E9PLN8 166 aa12.83□□□□□ -0.36
C9orf47-201ENST00000334490 PF4V1P10720 104 aa12.83□□□□□ -0.36
C9orf47-201ENST00000334490 TMEM255AQ5JRV8 349 aa12.83□□□□□ -0.36
C9orf47-201ENST00000334490 ZNF561Q8N587 486 aa12.83□□□□□ -0.36
C9orf47-201ENST00000334490 VKORC1Q9BQB6 163 aa12.83□□□□□ -0.36
C9orf47-201ENST00000334490 DUXBA0A1W2PPF3 345 aa12.83□□□□□ -0.36
C9orf47-201ENST00000334490 FAM201AQ5SY85 155 aa12.83□□□□□ -0.36
C9orf47-201ENST00000334490 AQP3Q92482 292 aa12.83□□□□□ -0.36
C9orf47-201ENST00000334490 SCMH1Q96GD3 660 aa12.83□□□□□ -0.36
C9orf47-201ENST00000334490 PDPNQ86YL7 162 aa12.83□□□□□ -0.36
C9orf47-201ENST00000334490 PITPNC1Q9UKF7 332 aa12.83□□□□□ -0.36
C9orf47-201ENST00000334490 SMAD7O15105 426 aaKnown RBP12.82□□□□□ -0.36
C9orf47-201ENST00000334490 SS18L1O75177 396 aaPredicted RBP12.82□□□□□ -0.36
C9orf47-201ENST00000334490 NPIPB7O75200 414 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 EWSR1Q01844 656 aaKnown RBP eCLIP12.82□□□□□ -0.36
C9orf47-201ENST00000334490 DCAF12L2Q5VW00 463 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 ZNF429Q86V71 674 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 P2RX4Q99571 388 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 NPAS1Q99742 590 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 MRPL13Q9BYD1 178 aaKnown RBP12.82□□□□□ -0.36
C9orf47-201ENST00000334490 ALX4Q9H161 411 aaPredicted RBP12.82□□□□□ -0.36
C9orf47-201ENST00000334490 ZNF729A6NN14 1252 aaPredicted RBP12.82□□□□□ -0.36
C9orf47-201ENST00000334490 G3V3Q6 166 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 TRIM77I1YAP6 450 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 ZNF645Q8N7E2 425 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 SEMA5BQ9P283 1151 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 IGHV3OR16-10A0A075B7F0 116 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 B2MP61769 119 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 SRSF6Q13247 344 aaKnown RBP12.82□□□□□ -0.36
C9orf47-201ENST00000334490 MMD2Q8IY49 270 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 PNKDQ8N490 385 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 OR4P4Q8NGL7 312 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 DYNLRB2Q8TF09 96 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 WDR61Q9GZS3 305 aaKnown RBP12.82□□□□□ -0.36
C9orf47-201ENST00000334490 NXF2Q9GZY0 626 aaKnown RBP12.82□□□□□ -0.36
C9orf47-201ENST00000334490 RABAC1Q9UI14 185 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 NAGKQ9UJ70 344 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 TMEM14DPA8MWL7 114 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 SLC25A17O43808 307 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 S100A8P05109 93 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 GPHA2Q96T91 129 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 C1QTNF5Q9BXJ0 243 aa12.82□□□□□ -0.36
C9orf47-201ENST00000334490 PARD6AQ9NPB6 346 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms