RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 EDDM3AQ14507 147 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 SPRNQ5BIV9 151 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 CTRB2Q6GPI1 263 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 SPSB3Q6PJ21 355 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 Q6ZS92 163 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 OR10Z1Q8NGY1 313 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 NINJ1Q92982 152 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 GNPNAT1Q96EK6 184 aaPredicted RBP12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 PSENENQ9NZ42 101 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 DOCK11Q5JSL3 2073 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 DEFB108AA8MXU0 73 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 KLK10O43240 276 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 LINC00205P59089 165 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 VHLLQ6RSH7 139 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 THNSL2Q86YJ6 484 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 C20orf24Q9BUV8 137 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 PBDC1Q9BVG4 233 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 KCNJ16Q9NPI9 418 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 RNF212BA8MTL3 300 aa12.43□□□□□ -0.42
CLCNKA-201ENST00000331433 IFNL4K9M1U5 179 aa12.43□□□□□ -0.42
CLCNKA-201ENST00000331433 KRASP01116 189 aa12.43□□□□□ -0.42
CLCNKA-201ENST00000331433 OR13C7P0DN81 318 aa12.43□□□□□ -0.42
CLCNKA-201ENST00000331433 G6PCP35575 357 aa12.43□□□□□ -0.42
CLCNKA-201ENST00000331433 RTP5Q14D33 572 aa12.43□□□□□ -0.42
CLCNKA-201ENST00000331433 LTC4SQ16873 150 aa12.43□□□□□ -0.42
CLCNKA-201ENST00000331433 SLC25A24Q6NUK1 477 aa12.43□□□□□ -0.42
CLCNKA-201ENST00000331433 RBMXL3Q8N7X1 1067 aaKnown RBP12.43□□□□□ -0.42
CLCNKA-201ENST00000331433 PIEZO2Q9H5I5 2752 aa12.43□□□□□ -0.42
CLCNKA-201ENST00000331433 DFFBO76075 338 aa12.43□□□□□ -0.42
CLCNKA-201ENST00000331433 NUBP1P53384 320 aa12.43□□□□□ -0.42
CLCNKA-201ENST00000331433 TAS2R30P59541 319 aa12.43□□□□□ -0.42
CLCNKA-201ENST00000331433 AKR1C8PQ5T2L2 129 aa12.43□□□□□ -0.42
CLCNKA-201ENST00000331433 HAPLN4Q86UW8 402 aa12.43□□□□□ -0.42
CLCNKA-201ENST00000331433 LFNGQ8NES3 379 aa12.43□□□□□ -0.42
CLCNKA-201ENST00000331433 LRFN3Q9BTN0 628 aa12.43□□□□□ -0.42
CLCNKA-201ENST00000331433 IGHV3OR15-7A0A075B7D8 119 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 A0A1B0GWJ7 208 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 C17orf98A8MV24 154 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 S1PR2O95136 353 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 PRDX2P32119 198 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 BRWD1-AS2P59051 145 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 EIF4EBP1Q13541 118 aaPredicted RBP12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 AWAT1Q58HT5 328 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 SPANXN5Q5MJ07 72 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 FAM169BQ8N8A8 192 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 TCTEX1D2Q8WW35 142 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 PLPPR2Q96GM1 343 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 RSG1Q9BU20 258 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 SLC35B3Q9H1N7 401 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 RPS10P5Q9NQ39 176 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 WASF3Q9UPY6 502 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 APC2O95996 2303 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 IGKV1D-17A0A075B6S4 117 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 ST8SIA5O15466 376 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 IFNA5P01569 189 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 SNRNP70P08621 437 aaKnown RBP12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 EIF2S3P41091 472 aaKnown RBP12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 C1orf185Q5T7R7 199 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 SFT2D1Q8WV19 159 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 MMP24Q9Y5R2 645 aa12.42□□□□□ -0.42
CLCNKA-201ENST00000331433 UBE2KP61086 200 aa12.41□□□□□ -0.42
CLCNKA-201ENST00000331433 TIMM23BQ5SRD1 257 aa12.41□□□□□ -0.42
CLCNKA-201ENST00000331433 ZBTB34Q8NCN2 500 aa12.41□□□□□ -0.42
CLCNKA-201ENST00000331433 CD300LFQ8TDQ1 290 aa12.41□□□□□ -0.42
CLCNKA-201ENST00000331433 RXFP4Q8TDU9 374 aa12.41□□□□□ -0.42
CLCNKA-201ENST00000331433 OR2V2Q96R30 315 aa12.41□□□□□ -0.42
CLCNKA-201ENST00000331433 CLCC1Q96S66 551 aa12.41□□□□□ -0.42
CLCNKA-201ENST00000331433 MLXQ9UH92 298 aa12.41□□□□□ -0.42
CLCNKA-201ENST00000331433 PSG11Q9UQ72 335 aa12.41□□□□□ -0.42
CLCNKA-201ENST00000331433 RBFOX3A6NFN3 312 aa12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 SRRM5B3KS81 715 aa12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 M0R036 132 aa12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 ZNF737O75373 536 aa12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 CRYAAP02489 173 aa12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 HAGHQ16775 308 aa12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 C1orf174Q8IYL3 243 aa12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 ZNF525Q8N782 197 aa12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 AIFM2Q9BRQ8 373 aa12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 C15orf65H3BRN8 121 aa12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 DAOP14920 347 aa12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 FLI1Q01543 452 aaPredicted RBP12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 MZT1Q08AG7 82 aa12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 CATR1Q13166 79 aa12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 Q3ZCU0 254 aa12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 C22orf34Q6ZV56 151 aa12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 MOGAT3Q86VF5 341 aa12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 GCSAMQ8N6F7 178 aa12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 LURAP1Q96LR2 239 aa12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 TOLLIPQ9H0E2 274 aa12.4□□□□□ -0.42
CLCNKA-201ENST00000331433 C7orf77A4D0Y5 90 aa12.39□□□□□ -0.43
CLCNKA-201ENST00000331433 LINC00473A8K010 186 aa12.39□□□□□ -0.43
CLCNKA-201ENST00000331433 SPRY3O43610 288 aa12.39□□□□□ -0.43
CLCNKA-201ENST00000331433 CLDN1O95832 211 aa12.39□□□□□ -0.43
CLCNKA-201ENST00000331433 TNFRSF9Q07011 255 aa12.39□□□□□ -0.43
CLCNKA-201ENST00000331433 LILRB2Q8N423 598 aa12.39□□□□□ -0.43
CLCNKA-201ENST00000331433 MUCL1Q96DR8 90 aa12.39□□□□□ -0.43
CLCNKA-201ENST00000331433 RBKSQ9H477 322 aa12.39□□□□□ -0.43
CLCNKA-201ENST00000331433 VSIRQ9H7M9 311 aa12.39□□□□□ -0.43
CLCNKA-201ENST00000331433 SMCO4Q9NRQ5 59 aa12.39□□□□□ -0.43
CLCNKA-201ENST00000331433 PCNX1Q96RV3 2341 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms