RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 TEX30Q5JUR7 227 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 ADTRPQ96IZ2 230 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 C21orf140B9A014 251 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 OR2A4O95047 310 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 CA2P00918 260 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 HIST1H1BP16401 226 aaKnown RBP9.19□□□□□ -0.94
CLN8-201ENST00000331222 CKS2P33552 79 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 OR2A7Q96R45 310 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 C11orf68Q9H3H3 251 aaKnown RBP9.19□□□□□ -0.94
CLN8-201ENST00000331222 ACAA1P09110 424 aaPredicted RBP9.19□□□□□ -0.94
CLN8-201ENST00000331222 MEOX2P50222 304 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 TMEM38BQ9NVV0 291 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 MTFP1Q9UDX5 166 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 IFITM10A6NMD0 228 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 SFTPCP11686 197 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 FXYD3Q14802 87 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 LRRC75BQ2VPJ9 315 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 FBXW9Q5XUX1 488 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 BPIFA4PQ86YQ2 179 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 ABHD1Q96SE0 405 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 DTX4Q9Y2E6 619 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 CXorf1O96002 111 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 VN1R4Q7Z5H5 301 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 C9orf40Q8IXQ3 194 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 ZCCHC14Q8WYQ9 949 aaKnown RBP9.19□□□□□ -0.94
CLN8-201ENST00000331222 PGLYRP3Q96LB9 341 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 KCNK17Q96T54 332 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 PGPEP1Q9NXJ5 209 aa9.19□□□□□ -0.94
CLN8-201ENST00000331222 KLF9Q13886 244 aaPredicted RBP9.18□□□□□ -0.94
CLN8-201ENST00000331222 BSXQ3C1V8 233 aa9.18□□□□□ -0.94
CLN8-201ENST00000331222 COL5A1-AS1Q5SY13 56 aa9.18□□□□□ -0.94
CLN8-201ENST00000331222 RFLNBQ8N5W9 214 aa9.18□□□□□ -0.94
CLN8-201ENST00000331222 TP53RKQ96S44 253 aa9.18□□□□□ -0.94
CLN8-201ENST00000331222 EXOGQ9Y2C4 368 aaKnown RBP9.18□□□□□ -0.94
CLN8-201ENST00000331222 NHSQ6T4R5 1651 aa9.18□□□□□ -0.94
CLN8-201ENST00000331222 ZDBF2Q9HCK1 2354 aa9.18□□□□□ -0.94
CLN8-201ENST00000331222 PAPPAQ13219 1627 aa9.18□□□□□ -0.94
CLN8-201ENST00000331222 ANK1P16157 1881 aa9.18□□□□□ -0.94
CLN8-201ENST00000331222 CD74P04233 296 aa9.18□□□□□ -0.94
CLN8-201ENST00000331222 WDR25Q64LD2 544 aaPredicted RBP9.18□□□□□ -0.94
CLN8-201ENST00000331222 SCMH1Q96GD3 660 aa9.18□□□□□ -0.94
CLN8-201ENST00000331222 SF3B6Q9Y3B4 125 aaKnown RBP9.18□□□□□ -0.94
CLN8-201ENST00000331222 UCP2P55851 309 aa9.18□□□□□ -0.94
CLN8-201ENST00000331222 CX3CL1P78423 397 aa9.18□□□□□ -0.94
CLN8-201ENST00000331222 AWAT1Q58HT5 328 aa9.18□□□□□ -0.94
CLN8-201ENST00000331222 WDR73Q6P4I2 378 aa9.18□□□□□ -0.94
CLN8-201ENST00000331222 GMPPAQ96IJ6 420 aaPredicted RBP9.18□□□□□ -0.94
CLN8-201ENST00000331222 SSBP1Q04837 148 aaKnown RBP9.18□□□□□ -0.94
CLN8-201ENST00000331222 MBNL2Q5VZF2 373 aaKnown RBP9.18□□□□□ -0.94
CLN8-201ENST00000331222 PRNDQ9UKY0 176 aa9.18□□□□□ -0.94
CLN8-201ENST00000331222 CEP250Q9BV73 2442 aa9.18□□□□□ -0.94
CLN8-201ENST00000331222 C7orf71A4D174 169 aa9.18□□□□□ -0.94
CLN8-201ENST00000331222 OR5AU1Q8NGC0 362 aa9.18□□□□□ -0.94
CLN8-201ENST00000331222 RREB1Q92766 1687 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 A0A1B0GV72 72 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 ISLRO14498 428 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 NPFFO15130 113 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 TGFAP01135 160 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 HBZP02008 142 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 AMY1AP04745 511 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 GPX1P07203 203 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 SLC25A17O43808 307 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 SCTP09683 121 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 ZP3P21754 424 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 C2orf83Q53S99 150 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 WFDC12Q8WWY7 111 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 TMEM191AQ9H0A3 160 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 CYB5R1Q9UHQ9 305 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 BCORQ6W2J9 1755 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 GP1BAP07359 652 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 LIMS2Q7Z4I7 341 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 KIAA1551Q9HCM1 1747 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 LAMB2P55268 1798 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 CCDC144NLQ6NUI1 221 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 FAM131CQ96AQ9 280 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 TMEM56-RWDD3S4R434 201 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 A0A087X0M5 115 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 A0A1B0GX30 115 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 EWSR1Q01844 656 aaKnown RBP eCLIP9.17□□□□□ -0.94
CLN8-201ENST00000331222 ATP5G2Q06055 141 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 PCOLCEQ15113 449 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 OR52M1Q8NGK5 317 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 ST6GAL2Q96JF0 529 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 ZNF256Q9Y2P7 627 aaPredicted RBP9.17□□□□□ -0.94
CLN8-201ENST00000331222 MARF1Q9Y4F3 1742 aaKnown RBP9.17□□□□□ -0.94
CLN8-201ENST00000331222 DLL1O00548 723 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 GZMHP20718 246 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 CDCP2Q5VXM1 449 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 CBLN2Q8IUK8 224 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 SMRP1Q8NCR6 262 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 HIST1H4GQ99525 98 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 AKIP1Q9NQ31 210 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 OR2W1Q9Y3N9 320 aa9.17□□□□□ -0.94
CLN8-201ENST00000331222 CACNA1GO43497 2377 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 LOC105371242A0A075B767 164 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 KCNE1BA0A087WTH5 132 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 CXCL3P19876 107 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 ZIC1Q15915 447 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 SNAI3Q3KNW1 292 aa9.16□□□□□ -0.94
CLN8-201ENST00000331222 GLMPQ8WWB7 406 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms