RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 SYNGR1O43759 233 aa6.71□□□□□ -1.33
VMA21-201ENST00000330374 S100GP29377 79 aa6.71□□□□□ -1.33
VMA21-201ENST00000330374 DAZAP2Q15038 168 aaPredicted RBP6.71□□□□□ -1.33
VMA21-201ENST00000330374 RPP25LQ8N5L8 163 aaKnown RBP6.71□□□□□ -1.33
VMA21-201ENST00000330374 OR51G1Q8NGK1 321 aa6.71□□□□□ -1.33
VMA21-201ENST00000330374 OR10J5Q8NHC4 309 aa6.71□□□□□ -1.33
VMA21-201ENST00000330374 C10orf35Q96D05 121 aa6.71□□□□□ -1.33
VMA21-201ENST00000330374 MSL2Q9HCI7 577 aa6.71□□□□□ -1.33
VMA21-201ENST00000330374 RNF150Q9ULK6 438 aa6.71□□□□□ -1.33
VMA21-201ENST00000330374 hCG_38984A0A1B0GV85 526 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 GRIFINA4D1Z8 144 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 C2CD4DB7Z1M9 353 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 PAGE4O60829 102 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 CEACAM1P13688 526 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 MALP21145 153 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 PSMB3P49720 205 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 OR2T10Q8NGZ9 312 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 TMEM68Q96MH6 324 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 FOXB1Q99853 325 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 WNT5BQ9H1J7 359 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 FKBP11Q9NYL4 201 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 KIAA1324LA8MWY0 1029 aaPredicted RBP6.71□□□□□ -1.34
VMA21-201ENST00000330374 TRAPPC2LH3BP13 241 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 PRDX4Q13162 271 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 TCF23Q7RTU1 214 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 TMEM38BQ9NVV0 291 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 SVILO95425 2214 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 CLEC18AA5D8T8 446 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 ETV2O00321 342 aaPredicted RBP6.71□□□□□ -1.34
VMA21-201ENST00000330374 TGOLN2O43493 480 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 MBP02144 154 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 GYPAP02724 150 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 HBG1P69891 147 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 HBG2P69892 147 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 SRYQ05066 204 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 SLC38A11Q08AI6 406 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 VASH2Q86V25 355 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 C17orf82Q86X59 251 aaPredicted RBP6.71□□□□□ -1.34
VMA21-201ENST00000330374 CLEC18CQ8NCF0 446 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 OR5D13Q8NGL4 314 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 PSMF1Q92530 271 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 ACTR3CQ9C0K3 210 aaPredicted RBP6.71□□□□□ -1.34
VMA21-201ENST00000330374 OR2H1Q9GZK4 316 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 CTDSP1Q9GZU7 261 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 LIN7CQ9NUP9 197 aaKnown RBP6.71□□□□□ -1.34
VMA21-201ENST00000330374 RARRES3Q9UL19 164 aa6.71□□□□□ -1.34
VMA21-201ENST00000330374 PI4KAP42356 2102 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 M0R143 59 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 NUPR1O60356 82 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 ZIC3O60481 467 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 PDGFBP01127 241 aaPredicted RBP6.7□□□□□ -1.34
VMA21-201ENST00000330374 HIST1H3AP68431 136 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 TMEM41BQ5BJD5 291 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 RAB40CQ96S21 281 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 TMEM242Q9NWH2 141 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 MTCH1Q9NZJ7 389 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 C5orf49A4QMS7 147 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 H0Y980 276 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 KRASP01116 189 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 FAM87AP0C7U9 286 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 CARD18P57730 90 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 OR8B8Q15620 311 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 IQCJQ1A5X6 159 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 SP5Q6BEB4 398 aaPredicted RBP6.7□□□□□ -1.34
VMA21-201ENST00000330374 ABHD3Q8WU67 409 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 CLDN23Q96B33 292 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 CHRNA10Q9GZZ6 450 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 PATZ1Q9HBE1 687 aaKnown RBP6.7□□□□□ -1.34
VMA21-201ENST00000330374 PEMTQ9UBM1 199 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 COL6A3P12111 3177 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 A0A0G2JMM0 328 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 A0A1W2PPB8 328 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 A0A1W2PRS3 328 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 KIR3DP1A8MWS1 328 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 B9A039 149 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 KBTBD11O94819 623 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 HRASP01112 189 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 GCGP01275 180 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 IGKV1-39P01597 117 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 IGKV1D-39P04432 117 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 ACSM6Q6P461 480 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 TOMM20LQ6UXN7 152 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 DPPA3Q6W0C5 159 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 CYP2G1PQ6ZSU1 146 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 MKXQ8IYA7 352 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 CPEB3Q8NE35 698 aaKnown RBP6.7□□□□□ -1.34
VMA21-201ENST00000330374 TAF15Q92804 592 aaKnown RBP eCLIP6.7□□□□□ -1.34
VMA21-201ENST00000330374 MS4A10Q96PG2 267 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 TBX15Q96SF7 602 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 CLN8Q9UBY8 286 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 SIT1Q9Y3P8 196 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 TRAPPC1Q9Y5R8 145 aa6.7□□□□□ -1.34
VMA21-201ENST00000330374 TRAV1-1A0A0B4J248 108 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 KIR2DS1A0A191URI9 304 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 VAMP5O95183 116 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 GOSR1O95249 250 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 CST2P09228 141 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 KIR2DS4P43632 304 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 NXPH1P58417 271 aa6.69□□□□□ -1.34
VMA21-201ENST00000330374 KIR2DS1Q14954 304 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms