RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 KLF4O43474 513 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 DHRS7CA6NNS2 312 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 ORM1P02763 201 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 RPL30P62888 115 aaKnown RBP9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 SSX8Q7RTT4 187 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 KCNMB2Q9Y691 235 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 CEBPDP49716 269 aaPredicted RBP9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 TPRX1Q8N7U7 411 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 WDR31Q8NA23 367 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 OR2V2Q96R30 315 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 CCL13Q99616 98 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 SOSTQ9BQB4 213 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 IGHV3-21A0A0B4J1V1 117 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 OR11H4Q8NGC9 324 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 RAB24Q969Q5 203 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 PRDM14Q9GZV8 571 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 TRIP12Q14669 1992 aaPredicted RBP9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 SIGLEC5O15389 551 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 RPLP1P05386 114 aaKnown RBP9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 CLDN18P56856 261 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 TMEM187Q14656 261 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 PCOLCEQ15113 449 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 PRNTQ86SH4 94 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 FAM216AQ8WUB2 273 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 MARS2Q96GW9 593 aaKnown RBP9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 CISD1Q9NZ45 108 aaKnown RBP9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 TUBD1Q9UJT1 453 aa9.41□□□□□ -0.9
SNRNP200-201ENST00000323853 HIST3H3Q16695 136 aa9.4□□□□□ -0.9
SNRNP200-201ENST00000323853 WDFY1Q8IWB7 410 aa9.4□□□□□ -0.9
SNRNP200-201ENST00000323853 MS4A3Q96HJ5 214 aa9.4□□□□□ -0.9
SNRNP200-201ENST00000323853 SDHCQ99643 169 aaPredicted RBP9.4□□□□□ -0.9
SNRNP200-201ENST00000323853 IL19Q9UHD0 177 aa9.4□□□□□ -0.9
SNRNP200-201ENST00000323853 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.4□□□□□ -0.9
SNRNP200-201ENST00000323853 PRSS1P07477 247 aa9.4□□□□□ -0.9
SNRNP200-201ENST00000323853 ADRA2AP08913 450 aa9.4□□□□□ -0.9
SNRNP200-201ENST00000323853 OR2D3Q8NGH3 330 aa9.4□□□□□ -0.9
SNRNP200-201ENST00000323853 P2RX4Q99571 388 aa9.4□□□□□ -0.9
SNRNP200-201ENST00000323853 RPL31P62899 125 aaKnown RBP9.4□□□□□ -0.9
SNRNP200-201ENST00000323853 NHLRC3Q5JS37 347 aa9.4□□□□□ -0.9
SNRNP200-201ENST00000323853 WNT5BQ9H1J7 359 aa9.4□□□□□ -0.9
SNRNP200-201ENST00000323853 DCAF16Q9NXF7 216 aa9.4□□□□□ -0.9
SNRNP200-201ENST00000323853 MIOXQ9UGB7 285 aa9.4□□□□□ -0.9
SNRNP200-201ENST00000323853 CFDP00746 253 aaPredicted RBP9.4□□□□□ -0.91
SNRNP200-201ENST00000323853 CXorf66Q5JRM2 361 aaPredicted RBP9.4□□□□□ -0.91
SNRNP200-201ENST00000323853 SNRNP40Q96DI7 357 aaKnown RBP9.4□□□□□ -0.91
SNRNP200-201ENST00000323853 RARRES2Q99969 163 aa9.4□□□□□ -0.91
SNRNP200-201ENST00000323853 DLL3Q9NYJ7 618 aa9.4□□□□□ -0.91
SNRNP200-201ENST00000323853 PRR33A8MZF0 331 aa9.4□□□□□ -0.91
SNRNP200-201ENST00000323853 DLL1O00548 723 aa9.4□□□□□ -0.91
SNRNP200-201ENST00000323853 MPDU1O75352 247 aa9.4□□□□□ -0.91
SNRNP200-201ENST00000323853 PUSL1Q8N0Z8 303 aaKnown RBP9.4□□□□□ -0.91
SNRNP200-201ENST00000323853 OR8G5Q8NG78 346 aa9.4□□□□□ -0.91
SNRNP200-201ENST00000323853 SH3BGRL3Q9H299 93 aa9.4□□□□□ -0.91
SNRNP200-201ENST00000323853 TMEM14DPA8MWL7 114 aa9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 ADAM11O75078 769 aa9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 LBHQ53QV2 105 aaPredicted RBP9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 C10orf128Q5T292 105 aa9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 FAM222BQ8WU58 562 aa9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 IDI2-AS1Q9NZ38 188 aa9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 CEACAM18A8MTB9 384 aa9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 ACAA1P09110 424 aaPredicted RBP9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 COX5BP10606 129 aa9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 RBPMS2Q6ZRY4 209 aaKnown RBP9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 POC1AQ8NBT0 407 aa9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 PET117Q6UWS5 81 aa9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 HS3ST3B1Q9Y662 390 aa9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 ZNF646O15015 1829 aaPredicted RBP9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 KLK2P20151 261 aa9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 ZNF818PQ6ZRF7 136 aa9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 J3KRW8 73 aa9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 ZNF273Q14593 569 aa9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 P2RY6Q15077 328 aa9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 PRR7Q8TB68 274 aa9.39□□□□□ -0.91
SNRNP200-201ENST00000323853 HYPMO75409 117 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 IGKV3-11P04433 115 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 ERVFRD-1P60508 538 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 PAFAH1B2P68402 229 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 LRRC75AQ8NAA5 344 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 TAF15Q92804 592 aaKnown RBP eCLIP9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 LOXL4Q96JB6 756 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 TMEM74BQ9NUR3 256 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 AHRRA9YTQ3 701 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 MGPP08493 103 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 HOXD4P09016 255 aaPredicted RBP9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 ZNF137PP52743 207 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 RPS11P62280 158 aaKnown RBP eCLIP9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 MMDQ15546 238 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 ECSCRQ19T08 205 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 ASPHD2Q6ICH7 369 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 ZNF826PQ6ZT77 177 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 ITLN1Q8WWA0 313 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 TGIF2-C20orf24A0A0A6YYL0 155 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 KRTCAP3Q53RY4 240 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 LYRM7Q5U5X0 104 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 VN1R17PQ8TDU5 208 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 FAM90A26D6RGX4 464 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 DHRS11Q6UWP2 260 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 LILRB1Q8NHL6 650 aaPredicted RBP9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 STARD4Q96DR4 205 aa9.38□□□□□ -0.91
SNRNP200-201ENST00000323853 ZDHHC8Q9ULC8 765 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms