RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 FAM90A26D6RGX4 464 aa12.63□□□□□ -0.39
TCOF1-201ENST00000323668 RFPL3SP0C7P2 107 aa12.63□□□□□ -0.39
TCOF1-201ENST00000323668 TRGC1P0CF51 173 aa12.63□□□□□ -0.39
TCOF1-201ENST00000323668 SUMO1P63165 101 aaKnown RBP12.63□□□□□ -0.39
TCOF1-201ENST00000323668 IL3RAP26951 378 aa12.63□□□□□ -0.39
TCOF1-201ENST00000323668 OR4S2Q8NH73 311 aa12.63□□□□□ -0.39
TCOF1-201ENST00000323668 NGBQ9NPG2 151 aa12.63□□□□□ -0.39
TCOF1-201ENST00000323668 GLRX2Q9NS18 164 aa12.63□□□□□ -0.39
TCOF1-201ENST00000323668 OR1A1Q9P1Q5 309 aa12.63□□□□□ -0.39
TCOF1-201ENST00000323668 TRBV23-1A0A0A0MS06 115 aa12.63□□□□□ -0.39
TCOF1-201ENST00000323668 TMEM210A6NLX4 147 aa12.63□□□□□ -0.39
TCOF1-201ENST00000323668 GNG4P50150 75 aa12.63□□□□□ -0.39
TCOF1-201ENST00000323668 SLC23A3Q6PIS1 610 aa12.63□□□□□ -0.39
TCOF1-201ENST00000323668 ACY3Q96HD9 319 aa12.63□□□□□ -0.39
TCOF1-201ENST00000323668 LOC102723971A0A1B0GUV8 181 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 SPINK4O60575 86 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 CRISP2P16562 243 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 CASP6P55212 293 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 LRTM2Q8N967 370 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 OR10X1Q8NGY0 326 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 SSMEM1Q8WWF3 244 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 TMEM56Q96MV1 263 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 PSMG3Q9BT73 122 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-201ENST00000323668 OR6C3Q9NZP0 311 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 TMEM56-RWDD3S4R434 201 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 DENND4CQ5VZ89 1909 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 ADH4P08319 380 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 OR10J4P0C629 311 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 S100A7AQ86SG5 101 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 FKBP11Q9NYL4 201 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 KIAA1324LA8MWY0 1029 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-201ENST00000323668 SP1P08047 785 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 ADCYAP1P18509 176 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 CNN1P51911 297 aaKnown RBP12.62□□□□□ -0.39
TCOF1-201ENST00000323668 SSTP61278 116 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 DMRTA2Q96SC8 542 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 RBKSQ9H477 322 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 ZNF552Q9H707 407 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-201ENST00000323668 HSBP1O75506 76 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 MMP7P09237 267 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-201ENST00000323668 CD1BP29016 333 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 KIR2DS2P43631 304 aa12.62□□□□□ -0.39
TCOF1-201ENST00000323668 RCC1LQ96I51 464 aaKnown RBP12.62□□□□□ -0.39
TCOF1-201ENST00000323668 LINC00587B1AMM8 73 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 ST8SIA5O15466 376 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 BPIFB3P59826 476 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 GABRA6Q16445 453 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 WFDC1Q9HC57 220 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 K7N7A8 449 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 HBZP02008 142 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 ZNF83P51522 516 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 TNFRSF9Q07011 255 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 PRR27Q6MZM9 219 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 INO80CQ6PI98 192 aaPredicted RBP12.61□□□□□ -0.39
TCOF1-201ENST00000323668 TMPRSS7Q7RTY8 843 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 OR52L2PQ8NGH6 319 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 SGMS2Q8NHU3 365 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 PCGF1Q9BSM1 259 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 CHRDL1Q9BU40 450 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 ABHD14AQ9BUJ0 271 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 PILRBQ9UKJ0 227 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 C3orf80F5H4A9 247 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 COX7A2P2O60397 106 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 WDR25Q64LD2 544 aaPredicted RBP12.61□□□□□ -0.39
TCOF1-201ENST00000323668 RAB24Q969Q5 203 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 REPIN1Q9BWE0 567 aaKnown RBP12.61□□□□□ -0.39
TCOF1-201ENST00000323668 C1QTNF5Q9BXJ0 243 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 MSL2Q9HCI7 577 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 PNRC2Q9NPJ4 139 aaKnown RBP12.61□□□□□ -0.39
TCOF1-201ENST00000323668 TREM2Q9NZC2 230 aa12.61□□□□□ -0.39
TCOF1-201ENST00000323668 SHISA7A6NL88 538 aa12.6□□□□□ -0.39
TCOF1-201ENST00000323668 G0S2P27469 103 aa12.6□□□□□ -0.39
TCOF1-201ENST00000323668 BSCL2Q96G97 398 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-201ENST00000323668 C5orf63A6NC05 138 aa12.6□□□□□ -0.39
TCOF1-201ENST00000323668 CEACAM18A8MTB9 384 aa12.6□□□□□ -0.39
TCOF1-201ENST00000323668 PMCHP20382 165 aa12.6□□□□□ -0.39
TCOF1-201ENST00000323668 KLHDC1Q8N7A1 406 aa12.6□□□□□ -0.39
TCOF1-201ENST00000323668 TPRX1Q8N7U7 411 aa12.6□□□□□ -0.39
TCOF1-201ENST00000323668 BARX1Q9HBU1 254 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-201ENST00000323668 A0A087WWC5 75 aa12.6□□□□□ -0.39
TCOF1-201ENST00000323668 M0R143 59 aa12.6□□□□□ -0.39
TCOF1-201ENST00000323668 GNG10P50151 68 aa12.6□□□□□ -0.39
TCOF1-201ENST00000323668 TCTEX1D1Q8N7M0 179 aa12.6□□□□□ -0.39
TCOF1-201ENST00000323668 CNOT1A5YKK6 2376 aaKnown RBP12.6□□□□□ -0.39
TCOF1-201ENST00000323668 WISP1O95388 367 aa12.6□□□□□ -0.39
TCOF1-201ENST00000323668 LYL1P12980 280 aa12.6□□□□□ -0.39
TCOF1-201ENST00000323668 FOLR2P14207 255 aa12.6□□□□□ -0.39
TCOF1-201ENST00000323668 HOXA5P20719 270 aa12.6□□□□□ -0.39
TCOF1-201ENST00000323668 ESPL1Q14674 2120 aa12.6□□□□□ -0.39
TCOF1-201ENST00000323668 PPP1R32Q7Z5V6 425 aa12.6□□□□□ -0.39
TCOF1-201ENST00000323668 OR1L1Q8NH94 360 aa12.6□□□□□ -0.39
TCOF1-201ENST00000323668 LINC00470Q9BZP3 86 aa12.6□□□□□ -0.39
TCOF1-201ENST00000323668 GDF9O60383 454 aa12.59□□□□□ -0.39
TCOF1-201ENST00000323668 MRPS11P82912 194 aaKnown RBP12.59□□□□□ -0.39
TCOF1-201ENST00000323668 TMEM183BQ1AE95 376 aa12.59□□□□□ -0.39
TCOF1-201ENST00000323668 ADTRPQ96IZ2 230 aa12.59□□□□□ -0.39
TCOF1-201ENST00000323668 LOC102723996A0A087X1L8 192 aa12.59□□□□□ -0.39
TCOF1-201ENST00000323668 HOXB1P14653 301 aaPredicted RBP12.59□□□□□ -0.39
TCOF1-201ENST00000323668 SOX8P57073 446 aa12.59□□□□□ -0.39
TCOF1-201ENST00000323668 DRAM1Q8N682 238 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms