RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 TNFRSF9Q07011 255 aa18.74■□□□□ 0.59
PNKP-201ENST00000322344 ARL16Q0P5N6 197 aa18.74■□□□□ 0.59
PNKP-201ENST00000322344 KRBOX4Q5JUW0 171 aa18.74■□□□□ 0.59
PNKP-201ENST00000322344 HAPLN4Q86UW8 402 aa18.74■□□□□ 0.59
PNKP-201ENST00000322344 OR10G4Q8NGN3 311 aa18.74■□□□□ 0.59
PNKP-201ENST00000322344 STARD4Q96DR4 205 aa18.74■□□□□ 0.59
PNKP-201ENST00000322344 OR5H1A6NKK0 313 aa18.74■□□□□ 0.59
PNKP-201ENST00000322344 PTBP3O95758 552 aaKnown RBP18.74■□□□□ 0.59
PNKP-201ENST00000322344 EIF2S3P41091 472 aaKnown RBP18.74■□□□□ 0.59
PNKP-201ENST00000322344 AKR1D1P51857 326 aa18.74■□□□□ 0.59
PNKP-201ENST00000322344 COL10A1Q03692 680 aa18.74■□□□□ 0.59
PNKP-201ENST00000322344 BEND4Q6ZU67 534 aa18.74■□□□□ 0.59
PNKP-201ENST00000322344 ZFP82Q8N141 532 aa18.74■□□□□ 0.59
PNKP-201ENST00000322344 MRGPRDQ8TDS7 321 aa18.74■□□□□ 0.59
PNKP-201ENST00000322344 UFSP2Q9NUQ7 469 aa18.74■□□□□ 0.59
PNKP-201ENST00000322344 DKK4Q9UBT3 224 aa18.74■□□□□ 0.59
PNKP-201ENST00000322344 A0A1W2PPH5 198 aa18.73■□□□□ 0.59
PNKP-201ENST00000322344 DAOP14920 347 aa18.73■□□□□ 0.59
PNKP-201ENST00000322344 SPANXN5Q5MJ07 72 aa18.73■□□□□ 0.59
PNKP-201ENST00000322344 TMEM14EPQ6UXP3 125 aa18.73■□□□□ 0.59
PNKP-201ENST00000322344 C2CD4CQ8TF44 421 aa18.73■□□□□ 0.59
PNKP-201ENST00000322344 MBD3L1Q8WWY6 194 aa18.73■□□□□ 0.59
PNKP-201ENST00000322344 PINX1Q96BK5 328 aaKnown RBP18.73■□□□□ 0.59
PNKP-201ENST00000322344 RSG1Q9BU20 258 aa18.73■□□□□ 0.59
PNKP-201ENST00000322344 OPN3Q9H1Y3 402 aaPredicted RBP18.73■□□□□ 0.59
PNKP-201ENST00000322344 RBKSQ9H477 322 aa18.73■□□□□ 0.59
PNKP-201ENST00000322344 MSL2Q9HCI7 577 aa18.73■□□□□ 0.59
PNKP-201ENST00000322344 LAMP3Q9UQV4 416 aa18.73■□□□□ 0.59
PNKP-201ENST00000322344 LOC102723971A0A1B0GUV8 181 aa18.73■□□□□ 0.59
PNKP-201ENST00000322344 MBD3L4A6NDZ8 208 aaPredicted RBP18.73■□□□□ 0.59
PNKP-201ENST00000322344 MBD3L3A6NE82 208 aaPredicted RBP18.73■□□□□ 0.59
PNKP-201ENST00000322344 MBD3L5A6NJ08 208 aaPredicted RBP18.73■□□□□ 0.59
PNKP-201ENST00000322344 MAS1LP35410 378 aa18.73■□□□□ 0.59
PNKP-201ENST00000322344 RPL30P62888 115 aaKnown RBP18.73■□□□□ 0.59
PNKP-201ENST00000322344 ZNF66Q6ZN08 573 aa18.73■□□□□ 0.59
PNKP-201ENST00000322344 ZADH2Q8N4Q0 377 aa18.73■□□□□ 0.59
PNKP-201ENST00000322344 MBD3L2Q8NHZ7 208 aaPredicted RBP18.73■□□□□ 0.59
PNKP-201ENST00000322344 C5orf30Q96GV9 206 aa18.73■□□□□ 0.59
PNKP-201ENST00000322344 TAAR6Q96RI8 345 aa18.73■□□□□ 0.59
PNKP-201ENST00000322344 WDR61Q9GZS3 305 aaKnown RBP18.73■□□□□ 0.59
PNKP-201ENST00000322344 RPRMQ9NS64 109 aa18.73■□□□□ 0.59
PNKP-201ENST00000322344 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.73■□□□□ 0.59
PNKP-201ENST00000322344 FZR1Q9UM11 496 aa18.73■□□□□ 0.59
PNKP-201ENST00000322344 H3BQ15 152 aa18.72■□□□□ 0.59
PNKP-201ENST00000322344 RAB5AP20339 215 aa18.72■□□□□ 0.59
PNKP-201ENST00000322344 AGAP20933 346 aa18.72■□□□□ 0.59
PNKP-201ENST00000322344 RPL35P42766 123 aaKnown RBP18.72■□□□□ 0.59
PNKP-201ENST00000322344 ZNF808Q8N4W9 903 aaPredicted RBP18.72■□□□□ 0.59
PNKP-201ENST00000322344 ISOC2Q96AB3 205 aa18.72■□□□□ 0.59
PNKP-201ENST00000322344 MALSU1Q96EH3 234 aa18.72■□□□□ 0.59
PNKP-201ENST00000322344 RAMP3O60896 148 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 SLC38A11Q08AI6 406 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 LRRC29Q8WV35 223 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 TCTEX1D2Q8WW35 142 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 ESRP2Q9H6T0 727 aaKnown RBP18.71■□□□□ 0.59
PNKP-201ENST00000322344 SEBOXQ9HB31 216 aaPredicted RBP18.71■□□□□ 0.59
PNKP-201ENST00000322344 TIMM9Q9Y5J7 89 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 SLC25A15Q9Y619 301 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 FAM186AA6NE01 2351 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 LRRC30A6NM36 301 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 RAB29O14966 203 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 SPINT2O43291 252 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 CLDN14O95500 239 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 CLDN1O95832 211 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 ADH4P08319 380 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 GLIPR1P48060 266 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 HTD2P86397 168 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 ATP6V1FQ16864 119 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 ZNF429Q86V71 674 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 FAM90A1Q86YD7 464 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 FAM216AQ8WUB2 273 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 OR4C12Q96R67 309 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 HSD17B10Q99714 261 aaKnown RBP18.71■□□□□ 0.59
PNKP-201ENST00000322344 WASF3Q9UPY6 502 aa18.71■□□□□ 0.59
PNKP-201ENST00000322344 BDP1A6H8Y1 2624 aa18.7■□□□□ 0.58
PNKP-201ENST00000322344 A0A087WWC5 75 aa18.7■□□□□ 0.58
PNKP-201ENST00000322344 A0A1W2PPE2 198 aa18.7■□□□□ 0.58
PNKP-201ENST00000322344 KRASP01116 189 aa18.7■□□□□ 0.58
PNKP-201ENST00000322344 G6PCP35575 357 aa18.7■□□□□ 0.58
PNKP-201ENST00000322344 ZNF816Q0VGE8 651 aaPredicted RBP18.7■□□□□ 0.58
PNKP-201ENST00000322344 CYB561D1Q8N8Q1 229 aa18.7■□□□□ 0.58
PNKP-201ENST00000322344 OR13A1Q8NGR1 328 aa18.7■□□□□ 0.58
PNKP-201ENST00000322344 CISD1Q9NZ45 108 aaKnown RBP18.7■□□□□ 0.58
PNKP-201ENST00000322344 METRNQ9UJH8 293 aa18.7■□□□□ 0.58
PNKP-201ENST00000322344 OR2C1O95371 312 aa18.69■□□□□ 0.58
PNKP-201ENST00000322344 ARG1P05089 322 aa18.69■□□□□ 0.58
PNKP-201ENST00000322344 RPS23P62266 143 aaKnown RBP18.69■□□□□ 0.58
PNKP-201ENST00000322344 TMEM41BQ5BJD5 291 aa18.69■□□□□ 0.58
PNKP-201ENST00000322344 ZNF787Q6DD87 383 aa18.69■□□□□ 0.58
PNKP-201ENST00000322344 TAF15Q92804 592 aaKnown RBP eCLIP18.69■□□□□ 0.58
PNKP-201ENST00000322344 RAB39BQ96DA2 213 aa18.69■□□□□ 0.58
PNKP-201ENST00000322344 TVP23CQ96ET8 276 aa18.69■□□□□ 0.58
PNKP-201ENST00000322344 NIPSNAP3BQ9BS92 247 aa18.69■□□□□ 0.58
PNKP-201ENST00000322344 ODAMA1E959 279 aa18.69■□□□□ 0.58
PNKP-201ENST00000322344 S1PR2O95136 353 aa18.69■□□□□ 0.58
PNKP-201ENST00000322344 PRDX2P32119 198 aa18.69■□□□□ 0.58
PNKP-201ENST00000322344 EIF2S3LQ2VIR3 472 aaKnown RBP18.69■□□□□ 0.58
PNKP-201ENST00000322344 FAM24BQ8N5W8 94 aa18.69■□□□□ 0.58
PNKP-201ENST00000322344 CD177Q8N6Q3 437 aa18.69■□□□□ 0.58
PNKP-201ENST00000322344 C17orf98A8MV24 154 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms