RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 RPP30P78346 268 aaKnown RBP13.13□□□□□ -0.31
VARS2-201ENST00000321897 FGFBP3Q8TAT2 258 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 OR2D2Q9H210 308 aa13.13□□□□□ -0.31
VARS2-201ENST00000321897 NCOA6Q14686 2063 aaPredicted RBP13.12□□□□□ -0.31
VARS2-201ENST00000321897 SPEGQ15772 3267 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 A0A0A6YYD4 124 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 HSBP1O75506 76 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 CD33P20138 364 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 STARD6P59095 220 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 COL10A1Q03692 680 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 HEPN1Q6WQI6 88 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 ERASQ7Z444 233 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 WFDC8Q8IUA0 241 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 POLDIP2Q9Y2S7 368 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 FAM208BQ5VWN6 2430 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 NKX2-8O15522 239 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 PSG2P11465 335 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 GNG10P50151 68 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 CNN1P51911 297 aaKnown RBP13.12□□□□□ -0.31
VARS2-201ENST00000321897 FDX2Q6P4F2 183 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 RPRMQ9NS64 109 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 IGSF23A1L1A6 192 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 SPINT2O43291 252 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 SYNGR2O43760 224 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 MT-CO2P00403 227 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 TFF1P04155 84 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 UMODP07911 640 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 SRP19P09132 144 aaKnown RBP13.12□□□□□ -0.31
VARS2-201ENST00000321897 AESQ08117 197 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 IL24Q13007 206 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 MDP1Q86V88 176 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 SGMS2Q8NHU3 365 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 CIB3Q96Q77 187 aaPredicted RBP13.12□□□□□ -0.31
VARS2-201ENST00000321897 ANGPTL4Q9BY76 406 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 TTTY12Q9BZ98 90 aa13.12□□□□□ -0.31
VARS2-201ENST00000321897 MED13Q9UHV7 2174 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 DUXBA0A1W2PPF3 345 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 LRP5LA4QPB2 252 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 CRYM-AS1A6NIL9 109 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 IGHV2-70P01814 119 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 MDH2P40926 338 aaKnown RBP13.11□□□□□ -0.31
VARS2-201ENST00000321897 TFPI2P48307 235 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 HERPUD1Q15011 391 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 ATOH7Q8N100 152 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 RBKSQ9H477 322 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 WFDC1Q9HC57 220 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 NAGKQ9UJ70 344 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 GTF3C1Q12789 2109 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 NEIL1Q96FI4 390 aaPredicted RBP13.11□□□□□ -0.31
VARS2-201ENST00000321897 TPPP3Q9BW30 176 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 DYNLRB1Q9NP97 96 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 FOXJ2Q9P0K8 574 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 PIGBOS1A0A0B4J2F0 54 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 C11orf94C9JXX5 98 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 OR7C2O60412 319 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 WNT5AP41221 380 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 SUPT4H1P63272 117 aaKnown RBP13.11□□□□□ -0.31
VARS2-201ENST00000321897 ELOBQ15370 118 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 STARD4Q96DR4 205 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 HIST1H2BLQ99880 126 aa13.11□□□□□ -0.31
VARS2-201ENST00000321897 ZNF552Q9H707 407 aaPredicted RBP13.11□□□□□ -0.31
VARS2-201ENST00000321897 ZNF331Q9NQX6 463 aaPredicted RBP13.11□□□□□ -0.31
VARS2-201ENST00000321897 FCGR3BO75015 233 aa13.1□□□□□ -0.31
VARS2-201ENST00000321897 HSPB1P04792 205 aaKnown RBP13.1□□□□□ -0.31
VARS2-201ENST00000321897 GPR12P47775 334 aa13.1□□□□□ -0.31
VARS2-201ENST00000321897 HINT1P49773 126 aaPredicted RBP13.1□□□□□ -0.31
VARS2-201ENST00000321897 PLGLAQ15195 96 aa13.1□□□□□ -0.31
VARS2-201ENST00000321897 SLC35E3Q7Z769 313 aa13.1□□□□□ -0.31
VARS2-201ENST00000321897 GALMQ96C23 342 aa13.1□□□□□ -0.31
VARS2-201ENST00000321897 TMEM68Q96MH6 324 aa13.1□□□□□ -0.31
VARS2-201ENST00000321897 TP53RKQ96S44 253 aa13.1□□□□□ -0.31
VARS2-201ENST00000321897 ZNF71Q9NQZ8 489 aaPredicted RBP13.1□□□□□ -0.31
VARS2-201ENST00000321897 CHD9Q3L8U1 2897 aa13.1□□□□□ -0.31
VARS2-201ENST00000321897 B4DEV8 164 aa13.1□□□□□ -0.31
VARS2-201ENST00000321897 IGLV3-19P01714 112 aa13.1□□□□□ -0.31
VARS2-201ENST00000321897 GYPAP02724 150 aa13.1□□□□□ -0.31
VARS2-201ENST00000321897 OR10J1P30954 320 aa13.1□□□□□ -0.31
VARS2-201ENST00000321897 TECTBQ96PL2 329 aa13.1□□□□□ -0.31
VARS2-201ENST00000321897 MRPL13Q9BYD1 178 aaKnown RBP13.1□□□□□ -0.31
VARS2-201ENST00000321897 WNT5BQ9H1J7 359 aa13.1□□□□□ -0.31
VARS2-201ENST00000321897 TRDCB7Z8K6 153 aa13.1□□□□□ -0.31
VARS2-201ENST00000321897 M0R1X1 148 aa13.1□□□□□ -0.31
VARS2-201ENST00000321897 IGFBP3P17936 291 aaPredicted RBP13.1□□□□□ -0.31
VARS2-201ENST00000321897 IER3P46695 156 aa13.1□□□□□ -0.31
VARS2-201ENST00000321897 RBM11P57052 281 aaKnown RBP13.1□□□□□ -0.31
VARS2-201ENST00000321897 NUFIP2Q7Z417 695 aaKnown RBP13.1□□□□□ -0.31
VARS2-201ENST00000321897 GALNT14Q96FL9 552 aa13.1□□□□□ -0.31
VARS2-201ENST00000321897 SLC35D1Q9NTN3 355 aa13.1□□□□□ -0.31
VARS2-201ENST00000321897 LRRC3CA6NJW4 275 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 E9PLN8 166 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 TRA2AQ13595 282 aaKnown RBP eCLIP13.09□□□□□ -0.31
VARS2-201ENST00000321897 KIAA1644Q3SXP7 199 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 PPP1R32Q7Z5V6 425 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 SLC25A40Q8TBP6 338 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 WBP1Q96G27 269 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 MARS2Q96GW9 593 aaKnown RBP13.09□□□□□ -0.31
VARS2-201ENST00000321897 LYZL4Q96KX0 146 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 PLXNA2O75051 1894 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 NOTCH2Q04721 2471 aa13.09□□□□□ -0.31
VARS2-201ENST00000321897 CDS2O95674 445 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms