RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 CA5BP1Q8WTZ4 195 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 PACRGQ96M98 296 aaPredicted RBP13.47□□□□□ -0.25
USH1C-202ENST00000318024 TAAR3PQ9P1P4 343 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 UBE2J1Q9Y385 318 aaPredicted RBP13.47□□□□□ -0.25
USH1C-202ENST00000318024 FAM215AQ9Y5M1 114 aa13.47□□□□□ -0.25
USH1C-202ENST00000318024 ARHGAP21Q5T5U3 1957 aa13.46□□□□□ -0.25
USH1C-202ENST00000318024 A0A087X0M5 115 aa13.46□□□□□ -0.25
USH1C-202ENST00000318024 A0A1B0GX30 115 aa13.46□□□□□ -0.25
USH1C-202ENST00000318024 CHST1O43916 411 aa13.46□□□□□ -0.25
USH1C-202ENST00000318024 TNFSF13O75888 250 aa13.46□□□□□ -0.25
USH1C-202ENST00000318024 TUSC2O75896 110 aa13.46□□□□□ -0.25
USH1C-202ENST00000318024 VAMP2P63027 116 aa13.46□□□□□ -0.25
USH1C-202ENST00000318024 STX12Q86Y82 276 aa13.46□□□□□ -0.25
USH1C-202ENST00000318024 H1FOOQ8IZA3 346 aaPredicted RBP13.46□□□□□ -0.25
USH1C-202ENST00000318024 TMEM217Q8N7C4 229 aa13.46□□□□□ -0.25
USH1C-202ENST00000318024 RNASEH2CQ8TDP1 164 aaKnown RBP13.46□□□□□ -0.25
USH1C-202ENST00000318024 POM121Q96HA1 1249 aa13.46□□□□□ -0.25
USH1C-202ENST00000318024 SSX3Q99909 188 aa13.46□□□□□ -0.25
USH1C-202ENST00000318024 C2orf88Q9BSF0 95 aa13.46□□□□□ -0.25
USH1C-202ENST00000318024 OPN3Q9H1Y3 402 aaPredicted RBP13.46□□□□□ -0.25
USH1C-202ENST00000318024 IGKV1D-13A0A0B4J2D9 117 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 hCG_38984A0A1B0GV85 526 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 IGKV1-13P0DP09 117 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 EDN3P14138 238 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 NDUFB7P17568 137 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 ZNF92Q03936 586 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 JOSD1Q15040 202 aaPredicted RBP13.45□□□□□ -0.26
USH1C-202ENST00000318024 ZNF726P1Q15940 193 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 KRTCAP3Q53RY4 240 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 ZNF324BQ6AW86 544 aaPredicted RBP13.45□□□□□ -0.26
USH1C-202ENST00000318024 MDP1Q86V88 176 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 MBD3L1Q8WWY6 194 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 SNRNP40Q96DI7 357 aaKnown RBP13.45□□□□□ -0.26
USH1C-202ENST00000318024 OR51B6Q9H340 312 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 PRO1933Q9H354 126 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 SH3BGRL2Q9UJC5 107 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 PITPNC1Q9UKF7 332 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 NBEAQ8NFP9 2946 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 BCL2P10415 239 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 FUT6P51993 359 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 UCNP55089 124 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 HERPUD1Q15011 391 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 Q6ZT83 130 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 GAPTQ8N292 157 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 STARD4Q96DR4 205 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 GPHA2Q96T91 129 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 PYGO2Q9BRQ0 406 aa13.45□□□□□ -0.26
USH1C-202ENST00000318024 TSTD3H0UI37 97 aa13.44□□□□□ -0.26
USH1C-202ENST00000318024 DVL1O14640 695 aa13.44□□□□□ -0.26
USH1C-202ENST00000318024 ARR3P36575 388 aa13.44□□□□□ -0.26
USH1C-202ENST00000318024 COA6Q5JTJ3 125 aaKnown RBP13.44□□□□□ -0.26
USH1C-202ENST00000318024 CALHM1Q8IU99 346 aa13.44□□□□□ -0.26
USH1C-202ENST00000318024 IL22RA2Q969J5 263 aa13.44□□□□□ -0.26
USH1C-202ENST00000318024 Q9N2K0 584 aa13.44□□□□□ -0.26
USH1C-202ENST00000318024 RPRMQ9NS64 109 aa13.44□□□□□ -0.26
USH1C-202ENST00000318024 A0A0G2JRQ6 117 aa13.44□□□□□ -0.26
USH1C-202ENST00000318024 MBD3L4A6NDZ8 208 aaPredicted RBP13.44□□□□□ -0.26
USH1C-202ENST00000318024 MBD3L3A6NE82 208 aaPredicted RBP13.44□□□□□ -0.26
USH1C-202ENST00000318024 MBD3L5A6NJ08 208 aaPredicted RBP13.44□□□□□ -0.26
USH1C-202ENST00000318024 NAPSAO96009 420 aa13.44□□□□□ -0.26
USH1C-202ENST00000318024 NGFP01138 241 aa13.44□□□□□ -0.26
USH1C-202ENST00000318024 CELA3BP08861 270 aa13.44□□□□□ -0.26
USH1C-202ENST00000318024 RAB11AP62491 216 aa13.44□□□□□ -0.26
USH1C-202ENST00000318024 PLP2Q04941 152 aa13.44□□□□□ -0.26
USH1C-202ENST00000318024 MYPOPQ86VE0 399 aaPredicted RBP13.44□□□□□ -0.26
USH1C-202ENST00000318024 OR5D13Q8NGL4 314 aa13.44□□□□□ -0.26
USH1C-202ENST00000318024 OR4X1Q8NH49 305 aa13.44□□□□□ -0.26
USH1C-202ENST00000318024 MBD3L2Q8NHZ7 208 aaPredicted RBP13.44□□□□□ -0.26
USH1C-202ENST00000318024 ZNF665Q9H7R5 613 aa13.44□□□□□ -0.26
USH1C-202ENST00000318024 GNG13Q9P2W3 67 aa13.44□□□□□ -0.26
USH1C-202ENST00000318024 OPN1MWP04001 364 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 OPN1MW2P0DN77 364 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 OPN1MW3P0DN78 364 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 GZMBP10144 247 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 TDGF1P3P51864 188 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 TGFBR3Q03167 851 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 C4orf17Q53FE4 359 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 LBHQ53QV2 105 aaPredicted RBP13.43□□□□□ -0.26
USH1C-202ENST00000318024 SSX7Q7RTT5 188 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 TMEM183AQ8IXX5 376 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 FAM57AQ8TBR7 257 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 POM121L2Q96KW2 1035 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 C1QTNF5Q9BXJ0 243 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 ZNF442Q9H7R0 627 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 PLSCR4Q9NRQ2 329 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 SMG1Q96Q15 3661 aaKnown RBP13.43□□□□□ -0.26
USH1C-202ENST00000318024 INTS1Q8N201 2190 aaKnown RBP13.43□□□□□ -0.26
USH1C-202ENST00000318024 A8MWP6 167 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 WDR1O75083 606 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 DFFBO76075 338 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 AMBPP02760 352 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 PFN1P07737 140 aaKnown RBP13.43□□□□□ -0.26
USH1C-202ENST00000318024 SCTP09683 121 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 GABRA6Q16445 453 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 MPV17LQ2QL34 196 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 C1orf185Q5T7R7 199 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 THNSL2Q86YJ6 484 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 MISP3Q96FF7 219 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 SNX22Q96L94 193 aa13.43□□□□□ -0.26
USH1C-202ENST00000318024 P2RX4Q99571 388 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms