RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 HOXD3P31249 432 aaPredicted RBP13.92□□□□□ -0.18
TPM1-203ENST00000317516 MC5RP33032 325 aa13.92□□□□□ -0.18
TPM1-203ENST00000317516 RAB25P57735 213 aa13.92□□□□□ -0.18
TPM1-203ENST00000317516 KRTAP10-11P60412 298 aa13.92□□□□□ -0.18
TPM1-203ENST00000317516 TMEM65Q6PI78 240 aa13.92□□□□□ -0.18
TPM1-203ENST00000317516 LCNL1Q6ZST4 164 aa13.92□□□□□ -0.18
TPM1-203ENST00000317516 EDARADDQ8WWZ3 215 aa13.92□□□□□ -0.18
TPM1-203ENST00000317516 RAX2Q96IS3 184 aa13.92□□□□□ -0.18
TPM1-203ENST00000317516 IFI27L2Q9H2X8 130 aa13.92□□□□□ -0.18
TPM1-203ENST00000317516 AK3Q9UIJ7 227 aa13.92□□□□□ -0.18
TPM1-203ENST00000317516 V9GY05 133 aa13.92□□□□□ -0.18
TPM1-203ENST00000317516 A0A0A6YYD4 124 aa13.91□□□□□ -0.18
TPM1-203ENST00000317516 K7EIL1 84 aa13.91□□□□□ -0.18
TPM1-203ENST00000317516 ST8SIA5O15466 376 aa13.91□□□□□ -0.18
TPM1-203ENST00000317516 HLA-DRB1P01911 266 aa13.91□□□□□ -0.18
TPM1-203ENST00000317516 CEACAM6P40199 344 aa13.91□□□□□ -0.18
TPM1-203ENST00000317516 CFHR3Q02985 330 aa13.91□□□□□ -0.18
TPM1-203ENST00000317516 C5orf64Q2M2E5 130 aa13.91□□□□□ -0.18
TPM1-203ENST00000317516 NPBQ8NG41 125 aa13.91□□□□□ -0.18
TPM1-203ENST00000317516 OR56B1Q8NGI3 324 aa13.91□□□□□ -0.18
TPM1-203ENST00000317516 OR5M8Q8NGP6 311 aa13.91□□□□□ -0.18
TPM1-203ENST00000317516 FAM3DQ96BQ1 224 aa13.91□□□□□ -0.18
TPM1-203ENST00000317516 DUX3Q96PT4 197 aa13.91□□□□□ -0.18
TPM1-203ENST00000317516 GFI1Q99684 422 aa13.91□□□□□ -0.18
TPM1-203ENST00000317516 OR51J1Q9H342 316 aa13.91□□□□□ -0.18
TPM1-203ENST00000317516 C12orf4Q9NQ89 552 aa13.91□□□□□ -0.18
TPM1-203ENST00000317516 OR5H14A6NHG9 310 aa13.9□□□□□ -0.18
TPM1-203ENST00000317516 PDCD5O14737 125 aa13.9□□□□□ -0.18
TPM1-203ENST00000317516 PSMB8P28062 276 aa13.9□□□□□ -0.18
TPM1-203ENST00000317516 MAP2K4P45985 399 aa13.9□□□□□ -0.18
TPM1-203ENST00000317516 VEGFCP49767 419 aa13.9□□□□□ -0.18
TPM1-203ENST00000317516 MRPS15P82914 257 aaKnown RBP13.9□□□□□ -0.18
TPM1-203ENST00000317516 FABP5Q01469 135 aa13.9□□□□□ -0.18
TPM1-203ENST00000317516 DCTN2Q13561 401 aaKnown RBP13.9□□□□□ -0.18
TPM1-203ENST00000317516 C2orf76Q3KRA6 126 aa13.9□□□□□ -0.18
TPM1-203ENST00000317516 IZUMO2Q6UXV1 221 aa13.9□□□□□ -0.18
TPM1-203ENST00000317516 C4orf3Q8WVX3 66 aa13.9□□□□□ -0.18
TPM1-203ENST00000317516 RBMXL1Q96E39 390 aaKnown RBP13.9□□□□□ -0.18
TPM1-203ENST00000317516 RITA1Q96K30 269 aa13.9□□□□□ -0.18
TPM1-203ENST00000317516 CNBD2Q96M20 576 aa13.9□□□□□ -0.18
TPM1-203ENST00000317516 CMSS1Q9BQ75 279 aaKnown RBP13.9□□□□□ -0.18
TPM1-203ENST00000317516 RAB22AQ9UL26 194 aa13.9□□□□□ -0.18
TPM1-203ENST00000317516 WSB1Q9Y6I7 421 aa13.9□□□□□ -0.18
TPM1-203ENST00000317516 DENRO43583 198 aaKnown RBP13.89□□□□□ -0.19
TPM1-203ENST00000317516 RBBP9O75884 186 aa13.89□□□□□ -0.19
TPM1-203ENST00000317516 GSTP1P09211 210 aaKnown RBP13.89□□□□□ -0.19
TPM1-203ENST00000317516 TMEM50BP56557 158 aa13.89□□□□□ -0.19
TPM1-203ENST00000317516 HLA-DRB3P79483 266 aa13.89□□□□□ -0.19
TPM1-203ENST00000317516 TBCEQ15813 527 aaPredicted RBP13.89□□□□□ -0.19
TPM1-203ENST00000317516 ZNF367Q7RTV3 350 aa13.89□□□□□ -0.19
TPM1-203ENST00000317516 ARHGAP5-AS1Q96IT6 56 aa13.89□□□□□ -0.19
TPM1-203ENST00000317516 RNF5Q99942 180 aa13.89□□□□□ -0.19
TPM1-203ENST00000317516 Q9N2K0 584 aa13.89□□□□□ -0.19
TPM1-203ENST00000317516 PARP11Q9NR21 331 aa13.89□□□□□ -0.19
TPM1-203ENST00000317516 IGHV7-81A0A0B4J1V7 117 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 TRAV41A0A0B4J266 112 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 WI2-2373I1.2A0A1W2PRP0 233 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 FOXI3A8MTJ6 420 aaPredicted RBP13.88□□□□□ -0.19
TPM1-203ENST00000317516 H7C2Y5 167 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 ATP6V0E1O15342 81 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 RAMP3O60896 148 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 NDUFA3O95167 84 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 CT45A6P0DMU7 189 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 CT45A5P0DMU8 189 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 CT45A7P0DMV0 189 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 CNTFRP26992 372 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 PPIFP30405 207 aaKnown RBP13.88□□□□□ -0.19
TPM1-203ENST00000317516 CLDN12P56749 244 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 DGCR2P98153 550 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 PLGLAQ15195 96 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 RPL39P5Q59GN2 51 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 ZNF660Q6AZW8 331 aaPredicted RBP13.88□□□□□ -0.19
TPM1-203ENST00000317516 FAM131AQ6UXB0 335 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 ABHD14BQ96IU4 210 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 UBE2E2Q96LR5 201 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 AGMATQ9BSE5 352 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 HDHD3Q9BSH5 251 aaPredicted RBP13.88□□□□□ -0.19
TPM1-203ENST00000317516 PECRQ9BY49 303 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 C11orf54Q9H0W9 315 aaPredicted RBP13.88□□□□□ -0.19
TPM1-203ENST00000317516 ZNF221Q9UK13 617 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 WASHC3Q9Y3C0 194 aa13.88□□□□□ -0.19
TPM1-203ENST00000317516 TRAV1-2A0A0B4J238 106 aa13.87□□□□□ -0.19
TPM1-203ENST00000317516 TRDCB7Z8K6 153 aa13.87□□□□□ -0.19
TPM1-203ENST00000317516 RRHO14718 337 aa13.87□□□□□ -0.19
TPM1-203ENST00000317516 SCTP09683 121 aa13.87□□□□□ -0.19
TPM1-203ENST00000317516 MYL9P24844 172 aa13.87□□□□□ -0.19
TPM1-203ENST00000317516 SERPINB10P48595 397 aa13.87□□□□□ -0.19
TPM1-203ENST00000317516 TMEM267Q0VDI3 215 aaPredicted RBP13.87□□□□□ -0.19
TPM1-203ENST00000317516 DEFB136Q30KP8 78 aa13.87□□□□□ -0.19
TPM1-203ENST00000317516 C9orf66Q5T8R8 295 aa13.87□□□□□ -0.19
TPM1-203ENST00000317516 OR5AN1Q8NGI8 311 aa13.87□□□□□ -0.19
TPM1-203ENST00000317516 PTX4Q96A99 478 aa13.87□□□□□ -0.19
TPM1-203ENST00000317516 OR1A1Q9P1Q5 309 aa13.87□□□□□ -0.19
TPM1-203ENST00000317516 RAB26Q9ULW5 256 aa13.87□□□□□ -0.19
TPM1-203ENST00000317516 VSIG4Q9Y279 399 aa13.87□□□□□ -0.19
TPM1-203ENST00000317516 G3V318 75 aa13.86□□□□□ -0.19
TPM1-203ENST00000317516 H0YJW9 148 aa13.86□□□□□ -0.19
TPM1-203ENST00000317516 IGLV1-40P01703 118 aa13.86□□□□□ -0.19
TPM1-203ENST00000317516 CD3GP09693 182 aa13.86□□□□□ -0.19
TPM1-203ENST00000317516 GADD45AP24522 165 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms