RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 SPEM1Q8N4L4 309 aa13.84□□□□□ -0.19
CACFD1-202ENST00000316948 CPEB3Q8NE35 698 aaKnown RBP13.84□□□□□ -0.19
CACFD1-202ENST00000316948 CPT1CQ8TCG5 803 aa13.84□□□□□ -0.19
CACFD1-202ENST00000316948 ZDBF2Q9HCK1 2354 aa13.84□□□□□ -0.19
CACFD1-202ENST00000316948 CXCL13O43927 109 aa13.84□□□□□ -0.19
CACFD1-202ENST00000316948 PAGE4O60829 102 aa13.84□□□□□ -0.19
CACFD1-202ENST00000316948 CLDN1O95832 211 aa13.84□□□□□ -0.19
CACFD1-202ENST00000316948 EGR1P18146 543 aa13.84□□□□□ -0.19
CACFD1-202ENST00000316948 DUSP23Q9BVJ7 150 aa13.84□□□□□ -0.19
CACFD1-202ENST00000316948 C1QTNF9BB2RNN3 333 aa13.83□□□□□ -0.19
CACFD1-202ENST00000316948 CBR3O75828 277 aa13.83□□□□□ -0.19
CACFD1-202ENST00000316948 KLF7O75840 302 aaPredicted RBP13.83□□□□□ -0.19
CACFD1-202ENST00000316948 CARD18P57730 90 aa13.83□□□□□ -0.19
CACFD1-202ENST00000316948 RAC3P60763 192 aa13.83□□□□□ -0.19
CACFD1-202ENST00000316948 PSMF1Q92530 271 aa13.83□□□□□ -0.19
CACFD1-202ENST00000316948 DOCK7Q96N67 2140 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 A0A0U1RQK1 487 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 ZNF320A2RRD8 509 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 TMEM250H0YL14 139 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 NUPR1O60356 82 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 SLC25A6P12236 298 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 MLF1P58340 268 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 KRTAP27-1Q3LI81 207 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 CENPVQ7Z7K6 275 aaPredicted RBP13.83□□□□□ -0.2
CACFD1-202ENST00000316948 MKXQ8IYA7 352 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 CISD2Q8N5K1 135 aaKnown RBP13.83□□□□□ -0.2
CACFD1-202ENST00000316948 NAGKQ9UJ70 344 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 FAM90A10PA6NDY2 464 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 FAM90A18PA6NE21 464 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 FAM90A16PA6NEW6 464 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 FAM90A20PA6NIJ5 464 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 FAM90A8PA6NJQ4 464 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 FAM90A7PA6NKC0 464 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 ZNF716A6NP11 495 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 FAM90A22PA8MWA6 464 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 FAM90A12PA8MX19 464 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 FAM90A5PA8MXJ8 464 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 FAM90A23PA8MXZ1 464 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 WDR1O75083 606 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 GGCTO75223 188 aaKnown RBP13.83□□□□□ -0.2
CACFD1-202ENST00000316948 PDGFBP01127 241 aaPredicted RBP13.83□□□□□ -0.2
CACFD1-202ENST00000316948 FAM90A15PP0C7V4 464 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 FAM90A13PP0C7W8 464 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 FAM90A14PP0C7W9 464 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 FAM90A24PP0C7X0 464 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 CCL4P13236 92 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 HOXA6P31267 233 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 TRIM61Q5EBN2 209 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 C1orf194Q5T5A4 169 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 OR10G9Q8NGN4 311 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 OR10G7Q8NGN6 311 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 SAP25Q8TEE9 199 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 ANAPC16Q96DE5 110 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 SDSLQ96GA7 329 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 MS4A10Q96PG2 267 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 TECTBQ96PL2 329 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 WDR54Q9H977 334 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 SH2D2AQ9NP31 389 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 TRAPPC1Q9Y5R8 145 aa13.83□□□□□ -0.2
CACFD1-202ENST00000316948 DIDO1Q9BTC0 2240 aaKnown RBP13.82□□□□□ -0.2
CACFD1-202ENST00000316948 MBP02144 154 aa13.82□□□□□ -0.2
CACFD1-202ENST00000316948 RFPL3SP0C7P2 107 aa13.82□□□□□ -0.2
CACFD1-202ENST00000316948 IL3RAP26951 378 aa13.82□□□□□ -0.2
CACFD1-202ENST00000316948 B3GALT5-AS1P59052 145 aa13.82□□□□□ -0.2
CACFD1-202ENST00000316948 SRSF7Q16629 238 aaKnown RBP eCLIP13.82□□□□□ -0.2
CACFD1-202ENST00000316948 ACSF3Q4G176 576 aaPredicted RBP13.82□□□□□ -0.2
CACFD1-202ENST00000316948 KCNIP4Q6PIL6 250 aa13.82□□□□□ -0.2
CACFD1-202ENST00000316948 SF3B5Q9BWJ5 86 aaKnown RBP13.82□□□□□ -0.2
CACFD1-202ENST00000316948 K7ESF4 209 aa13.82□□□□□ -0.2
CACFD1-202ENST00000316948 PCBD1P61457 104 aa13.82□□□□□ -0.2
CACFD1-202ENST00000316948 C21orf62-AS1Q17RA5 79 aa13.82□□□□□ -0.2
CACFD1-202ENST00000316948 GGNQ86UU5 652 aa13.82□□□□□ -0.2
CACFD1-202ENST00000316948 TBX15Q96SF7 602 aa13.82□□□□□ -0.2
CACFD1-202ENST00000316948 A0A096LPE4 126 aa13.81□□□□□ -0.2
CACFD1-202ENST00000316948 A0A1W2PPZ6 126 aa13.81□□□□□ -0.2
CACFD1-202ENST00000316948 LILRA1O75019 489 aa13.81□□□□□ -0.2
CACFD1-202ENST00000316948 CRYAAP02489 173 aa13.81□□□□□ -0.2
CACFD1-202ENST00000316948 GCH1P30793 250 aa13.81□□□□□ -0.2
CACFD1-202ENST00000316948 Q8NFD4 153 aa13.81□□□□□ -0.2
CACFD1-202ENST00000316948 TRAPPC6AO75865 159 aa13.81□□□□□ -0.2
CACFD1-202ENST00000316948 RAB4AP20338 218 aa13.81□□□□□ -0.2
CACFD1-202ENST00000316948 CXCL12P48061 93 aa13.81□□□□□ -0.2
CACFD1-202ENST00000316948 ZNF585BQ52M93 769 aa13.81□□□□□ -0.2
CACFD1-202ENST00000316948 FFAR4Q5NUL3 377 aa13.81□□□□□ -0.2
CACFD1-202ENST00000316948 ABHD3Q8WU67 409 aa13.81□□□□□ -0.2
CACFD1-202ENST00000316948 LSM10Q969L4 123 aaKnown RBP13.81□□□□□ -0.2
CACFD1-202ENST00000316948 GPR35Q9HC97 309 aa13.81□□□□□ -0.2
CACFD1-202ENST00000316948 CTXND1A0A1B0GTU2 59 aa13.8□□□□□ -0.2
CACFD1-202ENST00000316948 GJE1A6NN92 205 aa13.8□□□□□ -0.2
CACFD1-202ENST00000316948 IGLV2-14P01704 120 aa13.8□□□□□ -0.2
CACFD1-202ENST00000316948 SRP14P37108 136 aaKnown RBP13.8□□□□□ -0.2
CACFD1-202ENST00000316948 IGFBP7Q16270 282 aa13.8□□□□□ -0.2
CACFD1-202ENST00000316948 WIPI1Q5MNZ9 446 aaPredicted RBP13.8□□□□□ -0.2
CACFD1-202ENST00000316948 MRPL21Q7Z2W9 205 aaKnown RBP13.8□□□□□ -0.2
CACFD1-202ENST00000316948 AGBL5Q8NDL9 886 aa13.8□□□□□ -0.2
CACFD1-202ENST00000316948 OR10D3Q8NH80 312 aa13.8□□□□□ -0.2
CACFD1-202ENST00000316948 NEIL1Q96FI4 390 aaPredicted RBP13.8□□□□□ -0.2
CACFD1-202ENST00000316948 TMEM208Q9BTX3 173 aa13.8□□□□□ -0.2
CACFD1-202ENST00000316948 C1QTNF5Q9BXJ0 243 aa13.8□□□□□ -0.2
CACFD1-202ENST00000316948 TMEM9BQ9NQ34 198 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms