RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 SCNM1Q9BWG6 230 aa5.26□□□□□ -1.57
PRKDC-201ENST00000314191 GAPDHP04406 335 aaKnown RBP5.26□□□□□ -1.57
PRKDC-201ENST00000314191 CD200P41217 278 aa5.26□□□□□ -1.57
PRKDC-201ENST00000314191 H0Y980 276 aa5.26□□□□□ -1.57
PRKDC-201ENST00000314191 FOXF2Q12947 444 aa5.26□□□□□ -1.57
PRKDC-201ENST00000314191 FOXL2NBQ6ZUU3 175 aa5.26□□□□□ -1.57
PRKDC-201ENST00000314191 IL36GQ9NZH8 169 aa5.26□□□□□ -1.57
PRKDC-201ENST00000314191 MED12LQ86YW9 2145 aa5.26□□□□□ -1.57
PRKDC-201ENST00000314191 OR4A8P0C604 315 aa5.26□□□□□ -1.57
PRKDC-201ENST00000314191 MRPL30Q8TCC3 161 aaKnown RBP5.26□□□□□ -1.57
PRKDC-201ENST00000314191 GALNT14Q96FL9 552 aa5.26□□□□□ -1.57
PRKDC-201ENST00000314191 TLNRD1Q9H1K6 362 aa5.26□□□□□ -1.57
PRKDC-201ENST00000314191 ZNF705GA8MUZ8 300 aaPredicted RBP5.26□□□□□ -1.57
PRKDC-201ENST00000314191 NAT1P18440 290 aa5.26□□□□□ -1.57
PRKDC-201ENST00000314191 OPRK1P41145 380 aa5.26□□□□□ -1.57
PRKDC-201ENST00000314191 OR4S2Q8NH73 311 aa5.26□□□□□ -1.57
PRKDC-201ENST00000314191 IGSF23A1L1A6 192 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 HS3ST6Q96QI5 342 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 NYNRINQ9P2P1 1898 aaKnown RBP5.25□□□□□ -1.57
PRKDC-201ENST00000314191 RPL31P62899 125 aaKnown RBP5.25□□□□□ -1.57
PRKDC-201ENST00000314191 AWAT1Q58HT5 328 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 RNFT1Q5M7Z0 435 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 PARD6AQ9NPB6 346 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 PAGE4O60829 102 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 MMP7P09237 267 aaPredicted RBP5.25□□□□□ -1.57
PRKDC-201ENST00000314191 NTF4P34130 210 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 THBS3P49746 956 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 RPEQ96AT9 228 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 J3QW42 95 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 ATP6V1FQ16864 119 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 FAM209AQ5JX71 171 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 KCNMB2Q9Y691 235 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 PPP1R2P9O14990 202 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 LILRA1O75019 489 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 SUPT4H1P63272 117 aaKnown RBP5.25□□□□□ -1.57
PRKDC-201ENST00000314191 LHFPL1Q86WI0 220 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 IGHV3-72A0A0B4J1Y9 119 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 ADTRPQ96IZ2 230 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 CLDN34H7C241 214 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 SNRPEP62304 92 aaKnown RBP5.25□□□□□ -1.57
PRKDC-201ENST00000314191 MYPOPQ86VE0 399 aaPredicted RBP5.25□□□□□ -1.57
PRKDC-201ENST00000314191 ZNF561Q8N587 486 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 ZNF645Q8N7E2 425 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 OR10A7Q8NGE5 316 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 CABLES2Q9BTV7 478 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 CALYQ9NYX4 217 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 FREM3P0C091 2139 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 ODAMA1E959 279 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 CCL21O00585 134 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 CHRNB4P30926 498 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 ZNF273Q14593 569 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 MDS2Q8NDY4 140 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 DAZAP1Q96EP5 407 aaKnown RBP5.25□□□□□ -1.57
PRKDC-201ENST00000314191 POM121Q96HA1 1249 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 DUXBA0A1W2PPF3 345 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 FAM74A7A6NL05 159 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 HPRT1P00492 218 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 FAM74A3Q4VXF1 159 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 TMEM56Q96MV1 263 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 ZNF737O75373 536 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 OTX1P32242 354 aaPredicted RBP5.25□□□□□ -1.57
PRKDC-201ENST00000314191 TNXAQ16473 311 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 TMEM241Q24JQ0 296 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 ZCCHC24Q8N2G6 241 aaKnown RBP5.25□□□□□ -1.57
PRKDC-201ENST00000314191 OR4C12Q96R67 309 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 FANCMQ8IYD8 2048 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 HOXD4P09016 255 aaPredicted RBP5.25□□□□□ -1.57
PRKDC-201ENST00000314191 SNRPCP09234 159 aaKnown RBP5.25□□□□□ -1.57
PRKDC-201ENST00000314191 HLA-GP17693 338 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 PRR27Q6MZM9 219 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 PRR7Q8TB68 274 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 NIT2Q9NQR4 276 aa5.25□□□□□ -1.57
PRKDC-201ENST00000314191 SLC25A10Q9UBX3 287 aaPredicted RBP5.25□□□□□ -1.57
PRKDC-201ENST00000314191 TRAV24A0A0B4J272 114 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 S1PR2O95136 353 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 DHRS11Q6UWP2 260 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 SSMEM1Q8WWF3 244 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 GFRA3O60609 400 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 BSXQ3C1V8 233 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 TMEM41BQ5BJD5 291 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 ABHD12Q8N2K0 398 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 MEGF10Q96KG7 1140 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 PLSCR2Q9NRY7 297 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 IGHV1-18A0A0C4DH31 117 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 KIR2DL2P43627 348 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-201ENST00000314191 BSCL2Q96G97 398 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-201ENST00000314191 RBKSQ9H477 322 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 WIPF3A6NGB9 483 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 F6UZH7 168 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 J3QR06 171 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 FBP1P09467 338 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 OR10J4P0C629 311 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 CHRNA7P36544 502 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 TAS2R45P59539 299 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 UBE2G1P62253 170 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 RSPO1Q2MKA7 263 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-201ENST00000314191 FLYWCH2Q96CP2 140 aaKnown RBP5.24□□□□□ -1.57
PRKDC-201ENST00000314191 RSRP1Q9BUV0 290 aa5.24□□□□□ -1.57
PRKDC-201ENST00000314191 CSRP1P21291 193 aaKnown RBP5.24□□□□□ -1.57
PRKDC-201ENST00000314191 RAB1CQ92928 201 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms