RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 PLPPR2Q96GM1 343 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 PACRGQ96M98 296 aaPredicted RBP2.77□□□□□ -1.97
CLOCK-201ENST00000309964 C11orf54Q9H0W9 315 aaPredicted RBP2.77□□□□□ -1.97
CLOCK-201ENST00000309964 CBLN4Q9NTU7 201 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 VAX2Q9UIW0 290 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 ERVH48-1M5A8F1 160 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 COX6CP09669 75 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 NPPCP23582 126 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 ZNF345Q14585 488 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 CCDC190Q86UF4 302 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 SLC24A4Q8NFF2 622 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 SPSB2Q99619 263 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 MAP1LC3CQ9BXW4 147 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 MRPL32Q9BYC8 188 aaKnown RBP2.77□□□□□ -1.97
CLOCK-201ENST00000309964 PRSS22Q9GZN4 317 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 ASCL3Q9NQ33 180 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 SIRT7Q9NRC8 400 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 PLXNA2O75051 1894 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 UBE2L5PA0A1B0GUS4 154 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 FXYD1O00168 92 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 CHST1O43916 411 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 ALX3O95076 343 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 COX6A1P12074 109 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 PGFP49763 221 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 SULT1A1P50225 295 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 ZNF146Q15072 292 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 TMEM183BQ1AE95 376 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 ZXDCQ2QGD7 858 aaPredicted RBP2.77□□□□□ -1.97
CLOCK-201ENST00000309964 SPANXN1Q5VSR9 72 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 TCF24Q7RTU0 167 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 OR1B1Q8NGR6 318 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 LSM10Q969L4 123 aaKnown RBP2.77□□□□□ -1.97
CLOCK-201ENST00000309964 FAM210BQ96KR6 192 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 NOL4LQ96MY1 436 aaPredicted RBP2.77□□□□□ -1.97
CLOCK-201ENST00000309964 FLVCR2Q9UPI3 526 aa2.77□□□□□ -1.97
CLOCK-201ENST00000309964 SFT2D2O95562 160 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 CDKN2AP42771 156 aaKnown RBP2.76□□□□□ -1.97
CLOCK-201ENST00000309964 LPAR6P43657 344 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 CLDN18P56856 261 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 RBM11P57052 281 aaKnown RBP2.76□□□□□ -1.97
CLOCK-201ENST00000309964 TCTAP57738 103 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 LBHQ53QV2 105 aaPredicted RBP2.76□□□□□ -1.97
CLOCK-201ENST00000309964 TSPO2Q5TGU0 170 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 Q6AWC8 147 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 REC114Q7Z4M0 266 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 SLC22A18ASQ8N1D0 253 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 NUDCD2Q8WVJ2 157 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 GTF3AQ92664 365 aaKnown RBP2.76□□□□□ -1.97
CLOCK-201ENST00000309964 SCMH1Q96GD3 660 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 SMIM14Q96QK8 99 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 TUBA4BQ9H853 241 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 TNFSF18Q9UNG2 199 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 ODAMA1E959 279 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 MOSPD3O75425 235 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 PRSS23O95084 383 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 GCGP01275 180 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 ASAH2BP0C7U1 165 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 DLX1P56177 255 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 LINC01559Q495D7 138 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 AMMECR1LQ6DCA0 310 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 NUDT10Q8NFP7 164 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 RNASEH2CQ8TDP1 164 aaKnown RBP2.76□□□□□ -1.97
CLOCK-201ENST00000309964 DTD1Q8TEA8 209 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 CACNG8Q8WXS5 425 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 KIR2DL4Q99706 377 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 SRRQ9GZT4 340 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 CHODLQ9H9P2 273 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 SLC6A13Q9NSD5 602 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 MSRB2Q9Y3D2 182 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 C9orf170A2RU37 121 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 TNFSF12O43508 249 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 ADRA2AP08913 450 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 SMIM10L1P0DMW3 83 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 POLR2IP36954 125 aaKnown RBP2.76□□□□□ -1.97
CLOCK-201ENST00000309964 GNG10P50151 68 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 NAAAQ02083 359 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 RPEL1Q2QD12 228 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 OR2I1PQ8NGU4 316 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 SMIM10Q96HG1 83 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 MOGAT1Q96PD6 335 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 QTRT1Q9BXR0 403 aaKnown RBP2.76□□□□□ -1.97
CLOCK-201ENST00000309964 SPANXCQ9NY87 97 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 RCL1Q9Y2P8 373 aaKnown RBP2.76□□□□□ -1.97
CLOCK-201ENST00000309964 M0R143 59 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 HYPMO75409 117 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 M6PRP20645 277 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 ERVS71-1P61550 626 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 ALKAL2Q6UX46 152 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 ZNF705AQ6ZN79 300 aaPredicted RBP2.76□□□□□ -1.97
CLOCK-201ENST00000309964 SSX7Q7RTT5 188 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 PRSS41Q7RTY9 318 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 MDP1Q86V88 176 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 OR10G4Q8NGN3 311 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 OR10G9Q8NGN4 311 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 OR10G7Q8NGN6 311 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 P2RX4Q99571 388 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 CXCL16Q9H2A7 254 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 ZDHHC11Q9H8X9 412 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 RABAC1Q9UI14 185 aa2.76□□□□□ -1.97
CLOCK-201ENST00000309964 PHLDA3Q9Y5J5 127 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms