RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 KHDC3LQ587J8 217 aa8.52□□□□□ -1.05
TMOD3-201ENST00000308580 ASCL5Q7RTU5 278 aa8.52□□□□□ -1.05
TMOD3-201ENST00000308580 CYB561D1Q8N8Q1 229 aa8.52□□□□□ -1.05
TMOD3-201ENST00000308580 IL22RA2Q969J5 263 aa8.52□□□□□ -1.05
TMOD3-201ENST00000308580 CACNA1DQ01668 2161 aa8.52□□□□□ -1.05
TMOD3-201ENST00000308580 B4DEV8 164 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 K7N7A8 449 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 AMTP48728 403 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 ZNF658BQ4V348 819 aaPredicted RBP8.51□□□□□ -1.05
TMOD3-201ENST00000308580 NFAM1Q8NET5 270 aaPredicted RBP8.51□□□□□ -1.05
TMOD3-201ENST00000308580 GPR146Q96CH1 333 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 TIMP4Q99727 224 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 IFT22Q9H7X7 185 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 OR51B2Q9Y5P1 312 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 SNRNP200O75643 2136 aaKnown RBP8.51□□□□□ -1.05
TMOD3-201ENST00000308580 MEOX2P50222 304 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 SUCLG1P53597 346 aaKnown RBP8.51□□□□□ -1.05
TMOD3-201ENST00000308580 NR2C2APQ86WQ0 139 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 HKR1P10072 659 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 SERF2P84101 59 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 SIGLEC12Q96PQ1 595 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 UBTD1Q9HAC8 227 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 KRTCAP3Q53RY4 240 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 H1FOOQ8IZA3 346 aaPredicted RBP8.51□□□□□ -1.05
TMOD3-201ENST00000308580 FGFRL1Q8N441 504 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 TRAV20A0A0B4J274 112 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 SNRPCP09234 159 aaKnown RBP8.51□□□□□ -1.05
TMOD3-201ENST00000308580 BCL2P10415 239 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 FOSL1P15407 271 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 CRISP2P16562 243 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 IZUMO4Q1ZYL8 232 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 PUSL1Q8N0Z8 303 aaKnown RBP8.51□□□□□ -1.05
TMOD3-201ENST00000308580 CLEC5AQ9NY25 188 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 TUBD1Q9UJT1 453 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 F2RL2O00254 374 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 ADRA2AP08913 450 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 SMIM17P0DL12 118 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 WDR73Q6P4I2 378 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 OR52M1Q8NGK5 317 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 ANAPC16Q96DE5 110 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 TMEM204Q9BSN7 226 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 C1RLQ9NZP8 487 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 ODAMA1E959 279 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 OR2A4O95047 310 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 PRSS3P2Q8NHM4 247 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 OR2A7Q96R45 310 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 RASL11BQ9BPW5 248 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 ASCL3Q9NQ33 180 aa8.51□□□□□ -1.05
TMOD3-201ENST00000308580 ZNF253O75346 499 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 LGALS7P47929 136 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 C10orf113Q5VZT2 155 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 MRPL54Q6P161 138 aaKnown RBP8.5□□□□□ -1.05
TMOD3-201ENST00000308580 AQP10Q96PS8 301 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 IGHV3-72A0A0B4J1Y9 119 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 HELTA6NFD8 242 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 MMP7P09237 267 aaPredicted RBP8.5□□□□□ -1.05
TMOD3-201ENST00000308580 ZNF714Q96N38 554 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 LPAR2Q9HBW0 351 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 YTHDF2Q9Y5A9 579 aaKnown RBP8.5□□□□□ -1.05
TMOD3-201ENST00000308580 LOC390937A0A1W2PQ73 354 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 ZIC3O60481 467 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 HOXB1P14653 301 aaPredicted RBP8.5□□□□□ -1.05
TMOD3-201ENST00000308580 NPAS1Q99742 590 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 NUDT16L1Q9BRJ7 211 aaKnown RBP8.5□□□□□ -1.05
TMOD3-201ENST00000308580 CXorf1O96002 111 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 MMP9P14780 707 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 WNT5AP41221 380 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 RANP62826 216 aaKnown RBP8.5□□□□□ -1.05
TMOD3-201ENST00000308580 OR8I2Q8N0Y5 310 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 LHFPL5Q8TAF8 219 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 SIRT7Q9NRC8 400 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 HOXD4P09016 255 aaPredicted RBP8.5□□□□□ -1.05
TMOD3-201ENST00000308580 ZNF552Q9H707 407 aaPredicted RBP8.5□□□□□ -1.05
TMOD3-201ENST00000308580 NPVFQ9HCQ7 196 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 SLC2A8Q9NY64 477 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 FUT9Q9Y231 359 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 CSN3P07498 182 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 ZNF837Q96EG3 531 aaPredicted RBP8.5□□□□□ -1.05
TMOD3-201ENST00000308580 IMMP1LQ96LU5 166 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 MESP1Q9BRJ9 268 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 RTN4RQ9BZR6 473 aa8.5□□□□□ -1.05
TMOD3-201ENST00000308580 ZNF703Q9H7S9 590 aaPredicted RBP8.5□□□□□ -1.05
TMOD3-201ENST00000308580 PDE6DO43924 150 aa8.49□□□□□ -1.05
TMOD3-201ENST00000308580 SRSF10O75494 262 aaKnown RBP8.49□□□□□ -1.05
TMOD3-201ENST00000308580 HNRNPA3P51991 378 aaKnown RBP8.49□□□□□ -1.05
TMOD3-201ENST00000308580 SAXO1Q8IYX7 474 aa8.49□□□□□ -1.05
TMOD3-201ENST00000308580 SELENOHQ8IZQ5 122 aaKnown RBP8.49□□□□□ -1.05
TMOD3-201ENST00000308580 OTOFQ9HC10 1997 aa8.49□□□□□ -1.05
TMOD3-201ENST00000308580 A0A087WV48 116 aa8.49□□□□□ -1.05
TMOD3-201ENST00000308580 A0A0G2JMM0 328 aa8.49□□□□□ -1.05
TMOD3-201ENST00000308580 A0A1W2PPB8 328 aa8.49□□□□□ -1.05
TMOD3-201ENST00000308580 A0A1W2PRS3 328 aa8.49□□□□□ -1.05
TMOD3-201ENST00000308580 KIR3DP1A8MWS1 328 aa8.49□□□□□ -1.05
TMOD3-201ENST00000308580 WDR90Q96KV7 1748 aa8.49□□□□□ -1.05
TMOD3-201ENST00000308580 MRPL14Q6P1L8 145 aaKnown RBP8.49□□□□□ -1.05
TMOD3-201ENST00000308580 ZNF818PQ6ZRF7 136 aa8.49□□□□□ -1.05
TMOD3-201ENST00000308580 GRAMD2BQ96HH9 432 aa8.49□□□□□ -1.05
TMOD3-201ENST00000308580 ZNF236Q9UL36 1845 aa8.49□□□□□ -1.05
TMOD3-201ENST00000308580 NEURL1O76050 574 aa8.49□□□□□ -1.05
TMOD3-201ENST00000308580 OR10J1P30954 320 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms