RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 SLC25A1P53007 311 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 PWWP2BQ6NUJ5 590 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 NIT1Q86X76 327 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 C18orf15Q96N68 181 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 APOMO95445 188 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 RIPPLY3P57055 190 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 ZNF793Q6ZN11 406 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 OR6X1Q8NH79 312 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 THAP10Q9P2Z0 257 aaPredicted RBP11.76□□□□□ -0.53
TRIM56-201ENST00000306085 CEACAM18A8MTB9 384 aa11.76□□□□□ -0.53
TRIM56-201ENST00000306085 EIF3IQ13347 325 aaKnown RBP11.76□□□□□ -0.53
TRIM56-201ENST00000306085 ZNF71Q9NQZ8 489 aaPredicted RBP11.76□□□□□ -0.53
TRIM56-201ENST00000306085 LINC01387J3KSC0 135 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 KLK2P20151 261 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 PQLC2Q6ZP29 291 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 PRR32B1ATL7 298 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 VDAC1P21796 283 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 TCF24Q7RTU0 167 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 OR5AC2Q9NZP5 309 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 CTSDP07339 412 aaPredicted RBP11.75□□□□□ -0.53
TRIM56-201ENST00000306085 ID4P47928 161 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 RAX2Q96IS3 184 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 HAX1O00165 279 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 RRHO14718 337 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 SYNGR1O43759 233 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 WIPI2Q9Y4P8 454 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 S1PR2O95136 353 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 TMEM50AO95807 157 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 MT-ND6P03923 174 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 DUX5Q96PT3 197 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 NKX2-8O15522 239 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 CYB5R3P00387 301 aaPredicted RBP11.75□□□□□ -0.53
TRIM56-201ENST00000306085 CXCL3P19876 107 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 CNTFRP26992 372 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 SSTR5P35346 364 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 KLF9Q13886 244 aaPredicted RBP11.75□□□□□ -0.53
TRIM56-201ENST00000306085 SLC25A40Q8TBP6 338 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 VCX2Q9H322 139 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 A0A1B0GTH9 108 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 MALP21145 153 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 KLHDC9Q8NEP7 349 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 OR11H12B2RN74 326 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 OR11H1Q8NG94 326 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 OR11H2Q8NH07 326 aa11.75□□□□□ -0.53
TRIM56-201ENST00000306085 SNAI2O43623 268 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 PATE4P0C8F1 98 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 LYZL2Q7Z4W2 148 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 ASB5Q8WWX0 329 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 AICDAQ9GZX7 198 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 A0A1W2PQM1 296 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 ZNF562Q6V9R5 426 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 ZNF707Q96C28 371 aaPredicted RBP11.74□□□□□ -0.53
TRIM56-201ENST00000306085 PXMP4Q9Y6I8 212 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 TCRBV5S2A0A599 114 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 SLIRPQ9GZT3 109 aaKnown RBP11.74□□□□□ -0.53
TRIM56-201ENST00000306085 A0A1W2PPE3 182 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 ZNF576Q9H609 170 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 SFTA2Q6UW10 78 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 STPG2Q8N412 459 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 OR8B12Q8NGG6 310 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 CUL9Q8IWT3 2517 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 FCARP24071 287 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 RNF122Q9H9V4 155 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 PLPP2O43688 288 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 SNAI3Q3KNW1 292 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 OPN3Q9H1Y3 402 aaPredicted RBP11.74□□□□□ -0.53
TRIM56-201ENST00000306085 GRIFINA4D1Z8 144 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 IGKV3-20P01619 116 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 PIGYQ3MUY2 71 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 MARVELD1Q9BSK0 173 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 HILPDAQ9Y5L2 63 aa11.74□□□□□ -0.53
TRIM56-201ENST00000306085 PAX2Q02962 417 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 CFDP00746 253 aaPredicted RBP11.73□□□□□ -0.53
TRIM56-201ENST00000306085 PPYP01298 95 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 SLC25A42Q86VD7 318 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 RIMKLAQ8IXN7 391 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 TRAV17A0A0B4J275 112 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 NDUFA3O95167 84 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 ZNF250P15622 560 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 SSPNQ14714 243 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 A0A1W2PS18 150 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 MYOGP15173 224 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 RAG2P55895 527 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 MRAPQ8TCY5 172 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 CCL28Q9NRJ3 127 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 SEC11BP0C7V7 166 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 H1FOOQ8IZA3 346 aaPredicted RBP11.73□□□□□ -0.53
TRIM56-201ENST00000306085 PKIBQ9C010 78 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 NXT2Q9NPJ8 142 aaKnown RBP11.73□□□□□ -0.53
TRIM56-201ENST00000306085 TRBV20OR9-2A0A075B6H5 130 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 ANKRD20A5PA0PJZ0 165 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 H3BRM9 83 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 LIPFP07098 398 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 ARL14EPLP0DKL9 152 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 MVDP53602 400 aa11.73□□□□□ -0.53
TRIM56-201ENST00000306085 PF4V1P10720 104 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 MEGF9Q9H1U4 602 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 CFAP161Q6P656 301 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 CITED1Q99966 193 aa11.72□□□□□ -0.53
TRIM56-201ENST00000306085 SSBP4Q9BWG4 385 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms