RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 HYPMO75409 117 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 PLAUP00749 431 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 C1QAP02745 245 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 LSM6P62312 80 aaKnown RBP12.93□□□□□ -0.34
SCN3B-201ENST00000299333 Q5BKY6 102 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 GFRALQ6UXV0 394 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 BIVMQ86UB2 503 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 TMEM45BQ96B21 275 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 NRAPQ86VF7 1730 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 RNFT1Q5M7Z0 435 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 CADM4Q8NFZ8 388 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 OR8G5Q8NG78 346 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 MRGPRX3Q96LB0 322 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 TRPM3Q9HCF6 1732 aaPredicted RBP12.92□□□□□ -0.34
SCN3B-201ENST00000299333 N4BP2Q86UW6 1770 aaPredicted RBP12.92□□□□□ -0.34
SCN3B-201ENST00000299333 IGHV5-51A0A0C4DH38 117 aa12.92□□□□□ -0.34
SCN3B-201ENST00000299333 SFTPCP11686 197 aa12.92□□□□□ -0.34
SCN3B-201ENST00000299333 RFLNBQ8N5W9 214 aa12.92□□□□□ -0.34
SCN3B-201ENST00000299333 DDX60LQ5H9U9 1706 aaKnown RBP12.92□□□□□ -0.34
SCN3B-201ENST00000299333 DNAL4O96015 105 aa12.92□□□□□ -0.34
SCN3B-201ENST00000299333 QTRT1Q9BXR0 403 aaKnown RBP12.92□□□□□ -0.34
SCN3B-201ENST00000299333 WNT5BQ9H1J7 359 aa12.92□□□□□ -0.34
SCN3B-201ENST00000299333 MAP1LC3AQ9H492 121 aa12.92□□□□□ -0.34
SCN3B-201ENST00000299333 AKAP11Q9UKA4 1901 aa12.92□□□□□ -0.34
SCN3B-201ENST00000299333 DPRXA6NFQ7 191 aa12.92□□□□□ -0.34
SCN3B-201ENST00000299333 SNAI2O43623 268 aa12.92□□□□□ -0.34
SCN3B-201ENST00000299333 MOGAT3Q86VF5 341 aa12.92□□□□□ -0.34
SCN3B-201ENST00000299333 RND1Q92730 232 aa12.92□□□□□ -0.34
SCN3B-201ENST00000299333 KLK15Q9H2R5 256 aa12.92□□□□□ -0.34
SCN3B-201ENST00000299333 KLHDC2Q9Y2U9 406 aa12.92□□□□□ -0.34
SCN3B-201ENST00000299333 LIPT2A6NK58 231 aa12.92□□□□□ -0.34
SCN3B-201ENST00000299333 TM4SF4P48230 202 aa12.92□□□□□ -0.34
SCN3B-201ENST00000299333 H2BFSP57053 126 aa12.92□□□□□ -0.34
SCN3B-201ENST00000299333 CXorf66Q5JRM2 361 aaPredicted RBP12.92□□□□□ -0.34
SCN3B-201ENST00000299333 ST6GALNAC6Q969X2 333 aa12.92□□□□□ -0.34
SCN3B-201ENST00000299333 OR8B2Q96RD0 313 aa12.92□□□□□ -0.34
SCN3B-201ENST00000299333 NDUFS6O75380 124 aaKnown RBP12.91□□□□□ -0.34
SCN3B-201ENST00000299333 SSTR5P35346 364 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 ZNF324BQ6AW86 544 aaPredicted RBP12.91□□□□□ -0.34
SCN3B-201ENST00000299333 VN1R4Q7Z5H5 301 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 APCDD1LQ8NCL9 501 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 ZPLD1Q8TCW7 415 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 CHST5Q9GZS9 411 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 KCNE5Q9UJ90 142 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 MYO9BQ13459 2157 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 GPR3P46089 330 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 P2RY4P51582 365 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 TMEM177Q53S58 311 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 TBL2Q9Y4P3 447 aaKnown RBP12.91□□□□□ -0.34
SCN3B-201ENST00000299333 SHISA7A6NL88 538 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 HPRT1P00492 218 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 SRSF5Q13243 272 aaKnown RBP12.91□□□□□ -0.34
SCN3B-201ENST00000299333 NDUFAF3Q9BU61 184 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 RTN4RQ9BZR6 473 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 ERGP11308 486 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 KIR3DL2P43630 455 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 REG1BP48304 166 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 TM4SF20Q53R12 229 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 VAX1Q5SQQ9 334 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 ZNF441Q8N8Z8 693 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 TAF15Q92804 592 aaKnown RBP eCLIP12.91□□□□□ -0.34
SCN3B-201ENST00000299333 EAF1Q96JC9 268 aaPredicted RBP12.91□□□□□ -0.34
SCN3B-201ENST00000299333 TRBV5-3A0A0A0MS03 114 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 PGPA6NDG6 321 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 HYAL1Q12794 435 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 MIC13Q5XKP0 118 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 SLC25A40Q8TBP6 338 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 MARVELD3Q96A59 401 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 AQP10Q96PS8 301 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 NCOR1P1Q9H4R4 102 aa12.91□□□□□ -0.34
SCN3B-201ENST00000299333 LMO7DNF2Z398 122 aa12.9□□□□□ -0.34
SCN3B-201ENST00000299333 GAGE2BQ13066 116 aa12.9□□□□□ -0.34
SCN3B-201ENST00000299333 GAGE2EQ4V326 116 aa12.9□□□□□ -0.34
SCN3B-201ENST00000299333 RBKSQ9H477 322 aa12.9□□□□□ -0.34
SCN3B-201ENST00000299333 MRPS18AQ9NVS2 196 aaKnown RBP12.9□□□□□ -0.34
SCN3B-201ENST00000299333 GAGE2DQ9UEU5 116 aa12.9□□□□□ -0.34
SCN3B-201ENST00000299333 INSIG2Q9Y5U4 225 aa12.9□□□□□ -0.34
SCN3B-201ENST00000299333 A0A1W2PPC1 479 aa12.9□□□□□ -0.34
SCN3B-201ENST00000299333 TSPAN2O60636 221 aa12.9□□□□□ -0.34
SCN3B-201ENST00000299333 DNASE2BQ8WZ79 361 aa12.9□□□□□ -0.34
SCN3B-201ENST00000299333 NUBP1P53384 320 aa12.9□□□□□ -0.34
SCN3B-201ENST00000299333 NRTNQ99748 197 aa12.9□□□□□ -0.34
SCN3B-201ENST00000299333 IGHV3OR15-7A0A075B7D8 119 aa12.9□□□□□ -0.35
SCN3B-201ENST00000299333 CEACAM18A8MTB9 384 aa12.9□□□□□ -0.35
SCN3B-201ENST00000299333 J3QT63 122 aa12.9□□□□□ -0.35
SCN3B-201ENST00000299333 K7EQS6 105 aa12.9□□□□□ -0.35
SCN3B-201ENST00000299333 UBALD2Q8IYN6 164 aa12.9□□□□□ -0.35
SCN3B-201ENST00000299333 ZNF488Q96MN9 340 aa12.9□□□□□ -0.35
SCN3B-201ENST00000299333 TXNDC17Q9BRA2 123 aa12.9□□□□□ -0.35
SCN3B-201ENST00000299333 SSBP4Q9BWG4 385 aaPredicted RBP12.9□□□□□ -0.35
SCN3B-201ENST00000299333 OR2H1Q9GZK4 316 aa12.9□□□□□ -0.35
SCN3B-201ENST00000299333 GTSF1LQ9H1H1 148 aa12.9□□□□□ -0.35
SCN3B-201ENST00000299333 WNT16Q9UBV4 365 aa12.9□□□□□ -0.35
SCN3B-201ENST00000299333 GPR132Q9UNW8 380 aa12.9□□□□□ -0.35
SCN3B-201ENST00000299333 LINC00869P0C866 280 aa12.89□□□□□ -0.35
SCN3B-201ENST00000299333 PSG6Q00889 435 aa12.89□□□□□ -0.35
SCN3B-201ENST00000299333 CBLN1P23435 193 aa12.89□□□□□ -0.35
SCN3B-201ENST00000299333 MMD2Q8IY49 270 aa12.89□□□□□ -0.35
SCN3B-201ENST00000299333 OR4D5Q8NGN0 318 aa12.89□□□□□ -0.35
SCN3B-201ENST00000299333 LAMTOR2Q9Y2Q5 125 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms