RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 MARCH1Q8TCQ1 289 aa17.19■□□□□ 0.34
SMCO4-201ENST00000298966 DACT3Q96B18 629 aaPredicted RBP17.19■□□□□ 0.34
SMCO4-201ENST00000298966 MOB3AQ96BX8 217 aa17.19■□□□□ 0.34
SMCO4-201ENST00000298966 GPR132Q9UNW8 380 aa17.19■□□□□ 0.34
SMCO4-201ENST00000298966 TRBV23-1A0A0A0MS06 115 aa17.18■□□□□ 0.34
SMCO4-201ENST00000298966 CLPSL1A2RUU4 121 aa17.18■□□□□ 0.34
SMCO4-201ENST00000298966 TUSC2O75896 110 aa17.18■□□□□ 0.34
SMCO4-201ENST00000298966 ZBTB25P24278 435 aa17.18■□□□□ 0.34
SMCO4-201ENST00000298966 NPY4RP50391 375 aa17.18■□□□□ 0.34
SMCO4-201ENST00000298966 EDDM3BP56851 147 aa17.18■□□□□ 0.34
SMCO4-201ENST00000298966 HTD2P86397 168 aa17.18■□□□□ 0.34
SMCO4-201ENST00000298966 ZNF486Q96H40 463 aaPredicted RBP17.18■□□□□ 0.34
SMCO4-201ENST00000298966 KIRREL1Q96J84 757 aa17.18■□□□□ 0.34
SMCO4-201ENST00000298966 SEC22CQ9BRL7 303 aa17.18■□□□□ 0.34
SMCO4-201ENST00000298966 TNFRSF19Q9NS68 423 aa17.18■□□□□ 0.34
SMCO4-201ENST00000298966 TAS2R3Q9NYW6 316 aa17.18■□□□□ 0.34
SMCO4-201ENST00000298966 ZNF221Q9UK13 617 aa17.18■□□□□ 0.34
SMCO4-201ENST00000298966 C14orf166Q9Y224 244 aaKnown RBP17.18■□□□□ 0.34
SMCO4-201ENST00000298966 UBE2J1Q9Y385 318 aaPredicted RBP17.18■□□□□ 0.34
SMCO4-201ENST00000298966 FAM172BPA6NC97 362 aa17.17■□□□□ 0.34
SMCO4-201ENST00000298966 OR5H14A6NHG9 310 aa17.17■□□□□ 0.34
SMCO4-201ENST00000298966 ZNF729A6NN14 1252 aaPredicted RBP17.17■□□□□ 0.34
SMCO4-201ENST00000298966 C12orf77C9JDV5 145 aa17.17■□□□□ 0.34
SMCO4-201ENST00000298966 NDUFA7O95182 113 aa17.17■□□□□ 0.34
SMCO4-201ENST00000298966 PPYP01298 95 aa17.17■□□□□ 0.34
SMCO4-201ENST00000298966 TFF1P04155 84 aa17.17■□□□□ 0.34
SMCO4-201ENST00000298966 HNRNPCP07910 306 aaKnown RBP eCLIP17.17■□□□□ 0.34
SMCO4-201ENST00000298966 HERPUD1Q15011 391 aa17.17■□□□□ 0.34
SMCO4-201ENST00000298966 FBLN7Q53RD9 439 aa17.17■□□□□ 0.34
SMCO4-201ENST00000298966 IGSF11Q5DX21 431 aa17.17■□□□□ 0.34
SMCO4-201ENST00000298966 TMED4Q7Z7H5 227 aa17.17■□□□□ 0.34
SMCO4-201ENST00000298966 C1QL4Q86Z23 238 aa17.17■□□□□ 0.34
SMCO4-201ENST00000298966 H1FOOQ8IZA3 346 aaPredicted RBP17.17■□□□□ 0.34
SMCO4-201ENST00000298966 SLC38A6Q8IZM9 456 aa17.17■□□□□ 0.34
SMCO4-201ENST00000298966 OR10A7Q8NGE5 316 aa17.17■□□□□ 0.34
SMCO4-201ENST00000298966 ING3Q9NXR8 418 aa17.17■□□□□ 0.34
SMCO4-201ENST00000298966 LINC00312Q9Y6C7 94 aa17.17■□□□□ 0.34
SMCO4-201ENST00000298966 BET1O15155 118 aa17.16■□□□□ 0.34
SMCO4-201ENST00000298966 HSPA12AO43301 675 aa17.16■□□□□ 0.34
SMCO4-201ENST00000298966 CTSDP07339 412 aaPredicted RBP17.16■□□□□ 0.34
SMCO4-201ENST00000298966 OR4E1P0C645 316 aa17.16■□□□□ 0.34
SMCO4-201ENST00000298966 SULT1A3P0DMM9 295 aa17.16■□□□□ 0.34
SMCO4-201ENST00000298966 SULT1A4P0DMN0 295 aa17.16■□□□□ 0.34
SMCO4-201ENST00000298966 DEFB112Q30KQ8 113 aa17.16■□□□□ 0.34
SMCO4-201ENST00000298966 OR13A1Q8NGR1 328 aa17.16■□□□□ 0.34
SMCO4-201ENST00000298966 MRGPRDQ8TDS7 321 aa17.16■□□□□ 0.34
SMCO4-201ENST00000298966 ZNF431Q8TF32 576 aaPredicted RBP17.16■□□□□ 0.34
SMCO4-201ENST00000298966 NEIL1Q96FI4 390 aaPredicted RBP17.16■□□□□ 0.34
SMCO4-201ENST00000298966 ST6GAL2Q96JF0 529 aa17.16■□□□□ 0.34
SMCO4-201ENST00000298966 SSBP3Q9BWW4 388 aaPredicted RBP17.16■□□□□ 0.34
SMCO4-201ENST00000298966 LINC00574Q9H8X3 128 aa17.16■□□□□ 0.34
SMCO4-201ENST00000298966 C1RLQ9NZP8 487 aa17.16■□□□□ 0.34
SMCO4-201ENST00000298966 JPT1Q9UK76 154 aa17.16■□□□□ 0.34
SMCO4-201ENST00000298966 NBEAL2Q6ZNJ1 2754 aa17.16■□□□□ 0.34
SMCO4-201ENST00000298966 IGKV1-6A0A0C4DH72 117 aa17.15■□□□□ 0.34
SMCO4-201ENST00000298966 SSNA1O43805 119 aa17.15■□□□□ 0.34
SMCO4-201ENST00000298966 HBZP02008 142 aa17.15■□□□□ 0.34
SMCO4-201ENST00000298966 ZNF728P0DKX0 622 aa17.15■□□□□ 0.34
SMCO4-201ENST00000298966 PGAM2P15259 253 aa17.15■□□□□ 0.34
SMCO4-201ENST00000298966 NDUFB7P17568 137 aa17.15■□□□□ 0.34
SMCO4-201ENST00000298966 FCN2Q15485 313 aa17.15■□□□□ 0.34
SMCO4-201ENST00000298966 C4orf46Q504U0 113 aa17.15■□□□□ 0.34
SMCO4-201ENST00000298966 TMEM128Q5BJH2 165 aa17.15■□□□□ 0.34
SMCO4-201ENST00000298966 FAM185AQ8N0U4 392 aa17.15■□□□□ 0.34
SMCO4-201ENST00000298966 OR8B3Q8NGG8 313 aa17.15■□□□□ 0.34
SMCO4-201ENST00000298966 ARL11Q969Q4 196 aa17.15■□□□□ 0.34
SMCO4-201ENST00000298966 OR8B2Q96RD0 313 aa17.15■□□□□ 0.34
SMCO4-201ENST00000298966 FXYD6Q9H0Q3 95 aa17.15■□□□□ 0.34
SMCO4-201ENST00000298966 GAL3ST2Q9H3Q3 398 aa17.15■□□□□ 0.34
SMCO4-201ENST00000298966 PRDM13Q9H4Q3 707 aa17.15■□□□□ 0.34
SMCO4-201ENST00000298966 OR2W1Q9Y3N9 320 aa17.15■□□□□ 0.34
SMCO4-201ENST00000298966 IGHV2-70DA0A0C4DH43 119 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 A0A1W2PPH5 198 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 C15orf65H3BRN8 121 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 F2RL2O00254 374 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 DVL1O14640 695 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 RGS11O94810 467 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 CGB3P0DN86 165 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 CGB7P0DN87 165 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 RPS2P15880 293 aaKnown RBP17.14■□□□□ 0.33
SMCO4-201ENST00000298966 AADACP22760 399 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 S100GP29377 79 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 RBMXP38159 391 aaKnown RBP17.14■□□□□ 0.33
SMCO4-201ENST00000298966 RELBQ01201 579 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 DHODHQ02127 395 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 MSMO1Q15800 293 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 LY6G6FQ5SQ64 297 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 BRD3OSQ6XYD6 125 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 LYG2Q86SG7 212 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 CCDC71LQ8N9Z2 235 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 OR52M1Q8NGK5 317 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 IL1F10Q8WWZ1 152 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 C5orf66Q9H5L9 145 aa17.14■□□□□ 0.33
SMCO4-201ENST00000298966 KBTBD11-OT1A0A1B0GTJ5 212 aa17.13■□□□□ 0.33
SMCO4-201ENST00000298966 ITGB1BP1O14713 200 aa17.13■□□□□ 0.33
SMCO4-201ENST00000298966 WNT2P09544 360 aa17.13■□□□□ 0.33
SMCO4-201ENST00000298966 SELLP14151 372 aa17.13■□□□□ 0.33
SMCO4-201ENST00000298966 GNB2P62879 340 aa17.13■□□□□ 0.33
SMCO4-201ENST00000298966 RPL31P62899 125 aaKnown RBP17.13■□□□□ 0.33
SMCO4-201ENST00000298966 PAX2Q02962 417 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms