RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 GYPAP02724 150 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 APOBEC3AP31941 199 aaPredicted RBP8.44□□□□□ -1.06
C9orf43-201ENST00000288462 POLR2GP62487 172 aaKnown RBP eCLIP8.44□□□□□ -1.06
C9orf43-201ENST00000288462 RPL30P62888 115 aaKnown RBP8.44□□□□□ -1.06
C9orf43-201ENST00000288462 CATR1Q13166 79 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 LY6DQ14210 128 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 CDSNQ15517 529 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 C17orf58Q2M2W7 97 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 MST1LQ2TV78 715 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 MORN2Q502X0 79 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 TOR2AQ5JU69 321 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 FAM216BQ8N7L0 139 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 TCTEX1D1Q8N7M0 179 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 LINC01560Q8TB33 94 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 YPEL2Q96QA6 119 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 CCL13Q99616 98 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 RAB9BQ9NP90 201 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 SDHAF2Q9NX18 166 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 RNF115Q9Y4L5 304 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 ICE1Q9Y2F5 2266 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 KIAA1324LA8MWY0 1029 aaPredicted RBP8.44□□□□□ -1.06
C9orf43-201ENST00000288462 TMEM178BH3BS89 294 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 ITGB1BP1O14713 200 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 ST8SIA5O15466 376 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 SSSCA1O60232 199 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 JTBO76095 146 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 P0C879 139 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 ZNF16P17020 682 aaPredicted RBP8.44□□□□□ -1.06
C9orf43-201ENST00000288462 PVALBP20472 110 aaPredicted RBP8.44□□□□□ -1.06
C9orf43-201ENST00000288462 EPHA1P21709 976 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 EWSR1Q01844 656 aaKnown RBP eCLIP8.44□□□□□ -1.06
C9orf43-201ENST00000288462 SWI5Q1ZZU3 235 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 ZNF66Q6ZN08 573 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 C1orf87Q8N0U7 546 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 ZNF808Q8N4W9 903 aaPredicted RBP8.44□□□□□ -1.06
C9orf43-201ENST00000288462 OR2C3Q8N628 320 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 UBAC2Q8NBM4 344 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 DEFB108BQ8NET1 73 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 LRRC20Q8TCA0 184 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 TMED6Q8WW62 240 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 LRRC46Q96FV0 321 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 BSCL2Q96G97 398 aaPredicted RBP8.44□□□□□ -1.06
C9orf43-201ENST00000288462 HSD17B10Q99714 261 aaKnown RBP8.44□□□□□ -1.06
C9orf43-201ENST00000288462 ARV1Q9H2C2 271 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 LINC00574Q9H8X3 128 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 DYNLRB1Q9NP97 96 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 LYRM2Q9NU23 88 aaPredicted RBP8.44□□□□□ -1.06
C9orf43-201ENST00000288462 GNG12Q9UBI6 72 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 PFDN2Q9UHV9 154 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 PSG11Q9UQ72 335 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 ATRXP46100 2492 aa8.44□□□□□ -1.06
C9orf43-201ENST00000288462 TRAV38-1A0A0B4J264 116 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 KBTBD11-OT1A0A1B0GTJ5 212 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 IGSF23A1L1A6 192 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 TMEM8BA6NDV4 472 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 DEFB108AA8MXU0 73 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 B9A039 149 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 LOXP28300 417 aaPredicted RBP8.43□□□□□ -1.06
C9orf43-201ENST00000288462 AKR1C2P52895 323 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 BRWD1-AS2P59051 145 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 TMEM30BQ3MIR4 351 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 Q3ZCU0 254 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 Q6ZRM9 215 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 HSD17B13Q7Z5P4 300 aaPredicted RBP8.43□□□□□ -1.06
C9orf43-201ENST00000288462 EIF4E3Q8N5X7 224 aaKnown RBP8.43□□□□□ -1.06
C9orf43-201ENST00000288462 RNASE11Q8TAA1 199 aaKnown RBP8.43□□□□□ -1.06
C9orf43-201ENST00000288462 CORO2AQ92828 525 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 IFI27L2Q9H2X8 130 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 MS4A5Q9H3V2 200 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 TMEM106BQ9NUM4 274 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 CLN8Q9UBY8 286 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 CACNG5Q9UF02 275 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 ADGRG4Q8IZF6 3080 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 HCFC1P51610 2035 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 ARFGEF3Q5TH69 2177 aa8.43□□□□□ -1.06
C9orf43-201ENST00000288462 TRGV10A0A0A0MS01 117 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 RAMP3O60896 148 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 TMEM50AO95807 157 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 CLDN1O95832 211 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 PLAUP00749 431 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 FGF2P09038 288 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 LPAR6P43657 344 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 TFF3Q07654 80 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 LTC4SQ16873 150 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 BTNL3Q6UXE8 466 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 ZNF295-AS1Q8N0V1 137 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 TMEM204Q9BSN7 226 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 SMIM3Q9BZL3 60 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 MAGT1Q9H0U3 335 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 WFDC1Q9HC57 220 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 GFOD1Q9NXC2 390 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 COA4Q9NYJ1 87 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 MMP24Q9Y5R2 645 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 PPIAL4EA0A075B759 164 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 ZNF729A6NN14 1252 aaPredicted RBP8.42□□□□□ -1.06
C9orf43-201ENST00000288462 LINC00473A8K010 186 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 C17orf98A8MV24 154 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 PPIAL4DF5H284 164 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 I3L521 148 aa8.42□□□□□ -1.06
C9orf43-201ENST00000288462 TNFRSF13BO14836 293 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms