RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 KLK13Q9UKR3 277 aa15.94■□□□□ 0.14
PCDH1-201ENST00000287008 RPL8P62917 257 aaKnown RBP15.94■□□□□ 0.14
PCDH1-201ENST00000287008 ZNF273Q14593 569 aa15.94■□□□□ 0.14
PCDH1-201ENST00000287008 SAXO1Q8IYX7 474 aa15.94■□□□□ 0.14
PCDH1-201ENST00000287008 C5orf17Q8NAS9 161 aa15.94■□□□□ 0.14
PCDH1-201ENST00000287008 OR9G1Q8NH87 305 aa15.94■□□□□ 0.14
PCDH1-201ENST00000287008 IDI2-AS1Q9NZ38 188 aa15.94■□□□□ 0.14
PCDH1-201ENST00000287008 ID1P41134 155 aa15.93■□□□□ 0.14
PCDH1-201ENST00000287008 AMTP48728 403 aa15.93■□□□□ 0.14
PCDH1-201ENST00000287008 CEBPDP49716 269 aaPredicted RBP15.93■□□□□ 0.14
PCDH1-201ENST00000287008 PRSS3P2Q8NHM4 247 aa15.93■□□□□ 0.14
PCDH1-201ENST00000287008 GUCD1Q96NT3 240 aa15.93■□□□□ 0.14
PCDH1-201ENST00000287008 PLA2G10O15496 165 aa15.93■□□□□ 0.14
PCDH1-201ENST00000287008 HIST1H1EP10412 219 aaKnown RBP15.93■□□□□ 0.14
PCDH1-201ENST00000287008 RBPMS2Q6ZRY4 209 aaKnown RBP15.93■□□□□ 0.14
PCDH1-201ENST00000287008 TMEM37Q8WXS4 190 aa15.93■□□□□ 0.14
PCDH1-201ENST00000287008 UFC1Q9Y3C8 167 aa15.93■□□□□ 0.14
PCDH1-201ENST00000287008 TRAPPC1Q9Y5R8 145 aa15.93■□□□□ 0.14
PCDH1-201ENST00000287008 WNK2Q9Y3S1 2297 aa15.93■□□□□ 0.14
PCDH1-201ENST00000287008 CORTO00230 105 aa15.93■□□□□ 0.14
PCDH1-201ENST00000287008 RAMP1O60894 148 aa15.93■□□□□ 0.14
PCDH1-201ENST00000287008 UMODP07911 640 aa15.93■□□□□ 0.14
PCDH1-201ENST00000287008 SUCLG1P53597 346 aaKnown RBP15.93■□□□□ 0.14
PCDH1-201ENST00000287008 ZFP36L1Q07352 338 aaKnown RBP15.93■□□□□ 0.14
PCDH1-201ENST00000287008 LINC01590Q5TEZ4 76 aa15.93■□□□□ 0.14
PCDH1-201ENST00000287008 UNQ5815/PRO19632Q6UWF5 114 aa15.93■□□□□ 0.14
PCDH1-201ENST00000287008 ALX4Q9H161 411 aaPredicted RBP15.93■□□□□ 0.14
PCDH1-201ENST00000287008 OR2T8A6NH00 312 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 CDRT15L2A8MXV6 281 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 J3KRW8 73 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 COL8A1P27658 744 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 CAMPP49913 170 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 ZNF552Q9H707 407 aaPredicted RBP15.92■□□□□ 0.14
PCDH1-201ENST00000287008 C11orf94C9JXX5 98 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 NPIPB9F8W1W9 429 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 CDK2AP1O14519 115 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 ORM1P02763 201 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 OR4A5Q8NH83 315 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 TGFBR3LH3BV60 316 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 ZIC3O60481 467 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 ZNF708P17019 499 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 GHITMQ9H3K2 345 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 SNCGO76070 127 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 CECR9P0C854 216 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 SLC25A53Q5H9E4 307 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 SLC35E3Q7Z769 313 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 ABHD12Q8N2K0 398 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 TMEM54Q969K7 222 aa15.92■□□□□ 0.14
PCDH1-201ENST00000287008 RALYQ9UKM9 306 aaKnown RBP15.92■□□□□ 0.14
PCDH1-201ENST00000287008 LMX1BO60663 402 aa15.91■□□□□ 0.14
PCDH1-201ENST00000287008 HYPMO75409 117 aa15.91■□□□□ 0.14
PCDH1-201ENST00000287008 IGHMP01871 453 aa15.91■□□□□ 0.14
PCDH1-201ENST00000287008 FABP4P15090 132 aa15.91■□□□□ 0.14
PCDH1-201ENST00000287008 RCC1P18754 421 aaPredicted RBP15.91■□□□□ 0.14
PCDH1-201ENST00000287008 CD40P25942 277 aa15.91■□□□□ 0.14
PCDH1-201ENST00000287008 NPVFQ9HCQ7 196 aa15.91■□□□□ 0.14
PCDH1-201ENST00000287008 NIT2Q9NQR4 276 aa15.91■□□□□ 0.14
PCDH1-201ENST00000287008 RBFOX3A6NFN3 312 aa15.91■□□□□ 0.14
PCDH1-201ENST00000287008 FAM157CP0CG43 387 aa15.91■□□□□ 0.14
PCDH1-201ENST00000287008 CD59P13987 128 aa15.91■□□□□ 0.14
PCDH1-201ENST00000287008 ACSF3Q4G176 576 aaPredicted RBP15.91■□□□□ 0.14
PCDH1-201ENST00000287008 DCAF12L2Q5VW00 463 aa15.91■□□□□ 0.14
PCDH1-201ENST00000287008 C1orf162Q8NEQ5 155 aaPredicted RBP15.91■□□□□ 0.14
PCDH1-201ENST00000287008 HSF4Q9ULV5 492 aa15.91■□□□□ 0.14
PCDH1-201ENST00000287008 MED12Q93074 2177 aa15.91■□□□□ 0.14
PCDH1-201ENST00000287008 CXCL3P19876 107 aa15.91■□□□□ 0.14
PCDH1-201ENST00000287008 KRTDAPP60985 99 aa15.91■□□□□ 0.14
PCDH1-201ENST00000287008 PCSK4Q6UW60 755 aa15.91■□□□□ 0.14
PCDH1-201ENST00000287008 GREB1LQ9C091 1923 aaPredicted RBP15.91■□□□□ 0.14
PCDH1-201ENST00000287008 BSXQ3C1V8 233 aa15.91■□□□□ 0.14
PCDH1-201ENST00000287008 DNM1P46Q6ZS02 220 aa15.91■□□□□ 0.14
PCDH1-201ENST00000287008 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.91■□□□□ 0.14
PCDH1-201ENST00000287008 ZNF729A6NN14 1252 aaPredicted RBP15.9■□□□□ 0.14
PCDH1-201ENST00000287008 SLC25A17O43808 307 aa15.9■□□□□ 0.14
PCDH1-201ENST00000287008 HLA-DQB1P01920 261 aa15.9■□□□□ 0.14
PCDH1-201ENST00000287008 MUC1P15941 1255 aaPredicted RBP15.9■□□□□ 0.14
PCDH1-201ENST00000287008 TMEM30BQ3MIR4 351 aa15.9■□□□□ 0.14
PCDH1-201ENST00000287008 LOC102723996A0A087X1L8 192 aa15.9■□□□□ 0.14
PCDH1-201ENST00000287008 H0Y980 276 aa15.9■□□□□ 0.14
PCDH1-201ENST00000287008 NEURL1O76050 574 aa15.9■□□□□ 0.14
PCDH1-201ENST00000287008 ZNF79Q15937 498 aa15.9■□□□□ 0.14
PCDH1-201ENST00000287008 CLEC7AQ9BXN2 247 aa15.9■□□□□ 0.14
PCDH1-201ENST00000287008 PI4KAP42356 2102 aa15.9■□□□□ 0.14
PCDH1-201ENST00000287008 LOC390937A0A1W2PQ73 354 aa15.9■□□□□ 0.14
PCDH1-201ENST00000287008 FCN1O00602 326 aa15.9■□□□□ 0.14
PCDH1-201ENST00000287008 SELENOTP62341 195 aa15.9■□□□□ 0.14
PCDH1-201ENST00000287008 TRBV5-7A0A0A0MS05 114 aa15.9■□□□□ 0.14
PCDH1-201ENST00000287008 HIGD1AQ9Y241 93 aa15.9■□□□□ 0.14
PCDH1-201ENST00000287008 UBE2V2Q15819 145 aa15.89■□□□□ 0.13
PCDH1-201ENST00000287008 HCP5Q6MZN7 132 aa15.89■□□□□ 0.13
PCDH1-201ENST00000287008 JPT1Q9UK76 154 aa15.89■□□□□ 0.13
PCDH1-201ENST00000287008 IGSF23A1L1A6 192 aa15.89■□□□□ 0.13
PCDH1-201ENST00000287008 TCAPO15273 167 aa15.89■□□□□ 0.13
PCDH1-201ENST00000287008 PMCHP20382 165 aa15.89■□□□□ 0.13
PCDH1-201ENST00000287008 CD1BP29016 333 aa15.89■□□□□ 0.13
PCDH1-201ENST00000287008 PNRC1Q12796 327 aaPredicted RBP15.89■□□□□ 0.13
PCDH1-201ENST00000287008 PPP1R3EQ9H7J1 279 aa15.89■□□□□ 0.13
PCDH1-201ENST00000287008 CEACAM18A8MTB9 384 aa15.89■□□□□ 0.13
PCDH1-201ENST00000287008 GUCA2BQ16661 112 aa15.89■□□□□ 0.13
PCDH1-201ENST00000287008 RALGAPA1Q6GYQ0 2036 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms