RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 AURKAIP1Q9NWT8 199 aaPredicted RBP7.65□□□□□ -1.18
NIPBL-201ENST00000282516 CEACAM18A8MTB9 384 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 KRTCAP3Q53RY4 240 aa7.65□□□□□ -1.18
NIPBL-201ENST00000282516 PHLDA1Q8WV24 401 aaPredicted RBP7.65□□□□□ -1.18
NIPBL-201ENST00000282516 J3QT63 122 aa7.65□□□□□ -1.19
NIPBL-201ENST00000282516 MPLP40238 635 aa7.65□□□□□ -1.19
NIPBL-201ENST00000282516 PSG6Q00889 435 aa7.65□□□□□ -1.19
NIPBL-201ENST00000282516 C9orf62Q8N4C0 152 aa7.65□□□□□ -1.19
NIPBL-201ENST00000282516 OR5A1Q8NGJ0 315 aa7.65□□□□□ -1.19
NIPBL-201ENST00000282516 PDFQ9HBH1 243 aa7.65□□□□□ -1.19
NIPBL-201ENST00000282516 OR4C45A6NMZ5 311 aa7.65□□□□□ -1.19
NIPBL-201ENST00000282516 OR1P1Q8NH06 330 aa7.65□□□□□ -1.19
NIPBL-201ENST00000282516 FOXC2Q99958 501 aa7.65□□□□□ -1.19
NIPBL-201ENST00000282516 RHNO1Q9BSD3 238 aa7.65□□□□□ -1.19
NIPBL-201ENST00000282516 PRKNO60260 465 aaPredicted RBP7.65□□□□□ -1.19
NIPBL-201ENST00000282516 NKX2-2O95096 273 aa7.65□□□□□ -1.19
NIPBL-201ENST00000282516 ETHE1O95571 254 aa7.65□□□□□ -1.19
NIPBL-201ENST00000282516 NXPH1P58417 271 aa7.65□□□□□ -1.19
NIPBL-201ENST00000282516 FAM209BQ5JX69 171 aa7.65□□□□□ -1.19
NIPBL-201ENST00000282516 MS4A7Q9GZW8 240 aaPredicted RBP7.65□□□□□ -1.19
NIPBL-201ENST00000282516 ADAP1O75689 374 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 WFIKKN1Q96NZ8 548 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 RARRES2Q99969 163 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 ZNF430Q9H8G1 570 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-201ENST00000282516 TDHQ8IZJ6 230 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 CHST5Q9GZS9 411 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 TCRBV16S1A1N1A0A5B0 115 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 C7orf71A4D174 169 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 CTDSPLO15194 276 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 HPRT1P00492 218 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 TYMSP04818 313 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 RAE1P78406 368 aaKnown RBP7.64□□□□□ -1.19
NIPBL-201ENST00000282516 CCL4L1Q8NHW4 92 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 NRIP2Q9BQI9 281 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 ATAD5Q96QE3 1844 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 PRF1P14222 555 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 RPL31P62899 125 aaKnown RBP7.64□□□□□ -1.19
NIPBL-201ENST00000282516 HIST1H1AQ02539 215 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-201ENST00000282516 GVQW1Q8N7I0 195 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 PTPMT1Q8WUK0 201 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-201ENST00000282516 GAPDHP04406 335 aaKnown RBP7.64□□□□□ -1.19
NIPBL-201ENST00000282516 CCL2P13500 99 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 CX3CL1P78423 397 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 FAM106AQ4KMX7 169 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 NUBPLQ8TB37 319 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 PGLYRP4Q96LB8 373 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 SH3BGRL3Q9H299 93 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 MYLKQ15746 1914 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 A1L4Q6 167 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 DEFB123Q8N688 67 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 SPTY2D1-AS1A0A0U1RR47 76 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 PRRT4C9JH25 899 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 EML2O95834 649 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 ZNF714Q96N38 554 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 ASB1Q9Y576 335 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 PLXNB2O15031 1838 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 ALS2Q96Q42 1657 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 A0A1W2PRD5 423 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 A0A1W2PRF3 423 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 A0A1W2PRM7 423 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 B4GALNT1Q00973 533 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 LINC00470Q9BZP3 86 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 PXMP4Q9Y6I8 212 aa7.64□□□□□ -1.19
NIPBL-201ENST00000282516 GPBAR1Q8TDU6 330 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 RGPD3A6NKT7 1758 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-201ENST00000282516 MEX3AA1L020 520 aaKnown RBP7.63□□□□□ -1.19
NIPBL-201ENST00000282516 RBMY1BA6NDE4 496 aaKnown RBP7.63□□□□□ -1.19
NIPBL-201ENST00000282516 RBMY1EA6NEQ0 496 aaKnown RBP7.63□□□□□ -1.19
NIPBL-201ENST00000282516 GPX1P07203 203 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 RBMY1DP0C7P1 496 aaKnown RBP7.63□□□□□ -1.19
NIPBL-201ENST00000282516 RBMY1A1P0DJD3 496 aaKnown RBP7.63□□□□□ -1.19
NIPBL-201ENST00000282516 RBMY1CP0DJD4 496 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 RHBDD2Q6NTF9 364 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 SH2D5Q6ZV89 423 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 HDHD3Q9BSH5 251 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-201ENST00000282516 KCNK7Q9Y2U2 307 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 FFAR1O14842 300 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 FAM74A4Q5TZK3 123 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 XAF1Q6GPH4 301 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 PARLQ9H300 379 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 TMEFF2Q9UIK5 374 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-201ENST00000282516 CEACAM5P06731 702 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 PSG2P11465 335 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 GALNSP34059 522 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 PQLC2Q6ZP29 291 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 LHFPL5Q8TAF8 219 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 TNFSF18Q9UNG2 199 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 H0Y980 276 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 IGF2P01344 180 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 RGP1Q92546 391 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-201ENST00000282516 IL36RNQ9UBH0 155 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 IGKV3D-11A0A0A0MRZ8 115 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 A0A1B0GV90 55 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 IGKV3-11P04433 115 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 TM4SF4P48230 202 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 CFAP161Q6P656 301 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 HMX2A2RU54 273 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 ZNF98A6NK75 572 aa7.63□□□□□ -1.19
NIPBL-201ENST00000282516 HMGA1P17096 107 aaKnown RBP7.63□□□□□ -1.19
NIPBL-201ENST00000282516 FCGR2BP31994 310 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms