RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 DNPH1O43598 174 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 NAPSAO96009 420 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 RFPL3SP0C7P2 107 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 RAB11AP62491 216 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 SNAI3Q3KNW1 292 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 PHYHD1Q5SRE7 291 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 ZNF787Q6DD87 383 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 ZNF664Q8N3J9 261 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 BTF3L4Q96K17 158 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 ADGRG7Q96K78 797 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 REPIN1Q9BWE0 567 aaKnown RBP8.78□□□□□ -1
UPF3B-201ENST00000276201 METTL7AQ9H8H3 244 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 Q9N2K0 584 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 DCAF16Q9NXF7 216 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 BOKQ9UMX3 212 aaPredicted RBP8.78□□□□□ -1
UPF3B-201ENST00000276201 ST3GAL6Q9Y274 331 aa8.78□□□□□ -1
UPF3B-201ENST00000276201 ARID1AO14497 2285 aa8.77□□□□□ -1
UPF3B-201ENST00000276201 TMEM250H0YL14 139 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 SPRY1O43609 319 aaPredicted RBP8.77□□□□□ -1.01
UPF3B-201ENST00000276201 ANGPTL7O43827 346 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 CHST1O43916 411 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 NRASP01111 189 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 CELA3AP09093 270 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 RAB4AP20338 218 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 MAGEA5P43359 124 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 ASCL1P50553 236 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 FAM3BP58499 235 aaPredicted RBP8.77□□□□□ -1.01
UPF3B-201ENST00000276201 SLC10A1Q14973 349 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 DAZAP2Q15038 168 aaPredicted RBP8.77□□□□□ -1.01
UPF3B-201ENST00000276201 ACOT6Q3I5F7 207 aaPredicted RBP8.77□□□□□ -1.01
UPF3B-201ENST00000276201 GPR137CQ8N3F9 429 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 LSM10Q969L4 123 aaKnown RBP8.77□□□□□ -1.01
UPF3B-201ENST00000276201 RELTQ969Z4 430 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 TMEM68Q96MH6 324 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 DEFB127Q9H1M4 99 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 PRO1933Q9H354 126 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 ZNF703Q9H7S9 590 aaPredicted RBP8.77□□□□□ -1.01
UPF3B-201ENST00000276201 TAAR3PQ9P1P4 343 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 NCKAP5O14513 1909 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 hCG_38984A0A1B0GV85 526 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 TCAPO15273 167 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 RUNX1Q01196 453 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 ZNF92Q03936 586 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 OR1F12Q8NHA8 337 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 ANAPC16Q96DE5 110 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 SF3B5Q9BWJ5 86 aaKnown RBP8.77□□□□□ -1.01
UPF3B-201ENST00000276201 RIMS4Q9H426 269 aaPredicted RBP8.77□□□□□ -1.01
UPF3B-201ENST00000276201 RPRMQ9NS64 109 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 SLC7A10Q9NS82 523 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 PLEK2Q9NYT0 353 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 ZNF581Q9P0T4 197 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 GNG13Q9P2W3 67 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 ZNF835Q9Y2P0 537 aa8.77□□□□□ -1.01
UPF3B-201ENST00000276201 ZNF407Q9C0G0 2248 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 KIR2DS1A0A191URI9 304 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 GGCTO75223 188 aaKnown RBP8.76□□□□□ -1.01
UPF3B-201ENST00000276201 CST7O76096 145 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 KBTBD11O94819 623 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 OMGP23515 440 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 KIR2DS4P43632 304 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 COL10A1Q03692 680 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 ZNF154Q13106 437 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 KIR2DS1Q14954 304 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 LRRC75BQ2VPJ9 315 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 PIGYQ3MUY2 71 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 TMEM41BQ5BJD5 291 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 C5orf24Q7Z6I8 188 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 ZNF295-AS1Q8N0V1 137 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 OR51G1Q8NGK1 321 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 SCGB1C1Q8TD33 95 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 SPSB4Q96A44 273 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 SNX22Q96L94 193 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 SLC22A20A6NK97 555 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 IGHG3P01860 377 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 S100GP29377 79 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 SRP14P37108 136 aaKnown RBP8.76□□□□□ -1.01
UPF3B-201ENST00000276201 MDH2P40926 338 aaKnown RBP8.76□□□□□ -1.01
UPF3B-201ENST00000276201 CEBPGP53567 150 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 RBPJQ06330 500 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 ZNF726P1Q15940 193 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 PDZD11Q5EBL8 140 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 ZNF818PQ6ZRF7 136 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 THNSL2Q86YJ6 484 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 ZNF525Q8N782 197 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 R3HDM4Q96D70 268 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 OR14J1Q9UGF5 321 aa8.76□□□□□ -1.01
UPF3B-201ENST00000276201 ERRFI1Q9UJM3 462 aaPredicted RBP8.76□□□□□ -1.01
UPF3B-201ENST00000276201 ZNF816-ZNF321PA0A0X1KG74 233 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 IL18BPO95998 194 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 RELQ04864 619 aaPredicted RBP8.75□□□□□ -1.01
UPF3B-201ENST00000276201 TMEM241Q24JQ0 296 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 C4orf17Q53FE4 359 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 ACTL10Q5JWF8 245 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 GAPTQ8N292 157 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 ZIC4Q8N9L1 334 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 DYRK2Q92630 601 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 TMEM18Q96B42 140 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 HIST1H2AAQ96QV6 131 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 MAGT1Q9H0U3 335 aa8.75□□□□□ -1.01
UPF3B-201ENST00000276201 ZNF665Q9H7R5 613 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms