RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 A6NHS1 94 aa10.24□□□□□ -0.77
SS18-202ENST00000269138 RNF212BA8MTL3 300 aa10.24□□□□□ -0.77
SS18-202ENST00000269138 ITGB1BP1O14713 200 aa10.24□□□□□ -0.77
SS18-202ENST00000269138 DIRAS3O95661 229 aa10.24□□□□□ -0.77
SS18-202ENST00000269138 LPLP06858 475 aa10.24□□□□□ -0.77
SS18-202ENST00000269138 SAA2P0DJI9 122 aaPredicted RBP10.24□□□□□ -0.77
SS18-202ENST00000269138 NFYAP23511 347 aaPredicted RBP10.24□□□□□ -0.77
SS18-202ENST00000269138 RAB7AP51149 207 aa10.24□□□□□ -0.77
SS18-202ENST00000269138 RPL39P5Q59GN2 51 aa10.24□□□□□ -0.77
SS18-202ENST00000269138 CCDC144NLQ6NUI1 221 aa10.24□□□□□ -0.77
SS18-202ENST00000269138 MOB3BQ86TA1 216 aa10.24□□□□□ -0.77
SS18-202ENST00000269138 OR56B4Q8NH76 319 aa10.24□□□□□ -0.77
SS18-202ENST00000269138 ZFAND2BQ8WV99 257 aa10.24□□□□□ -0.77
SS18-202ENST00000269138 CFHR4Q92496 578 aa10.24□□□□□ -0.77
SS18-202ENST00000269138 ZNF251Q9BRH9 671 aa10.24□□□□□ -0.77
SS18-202ENST00000269138 GINS4Q9BRT9 223 aa10.24□□□□□ -0.77
SS18-202ENST00000269138 C19orf24Q9BVV8 132 aa10.24□□□□□ -0.77
SS18-202ENST00000269138 TCF19Q9Y242 345 aa10.24□□□□□ -0.77
SS18-202ENST00000269138 ZNF736B4DX44 427 aaPredicted RBP10.23□□□□□ -0.77
SS18-202ENST00000269138 J3QRK9 145 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 LANCL1O43813 399 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 CHST1O43916 411 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 OR8U9P0C7N5 309 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 NAT1P18440 290 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 BRS3P32247 399 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 ARPC4P59998 168 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 ZNF833PQ6ZTB9 187 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 TGIF2LXQ8IUE1 241 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 LYSMD2Q8IV50 215 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 OR8H3Q8N146 312 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 OR8U1Q8NH10 309 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 OR52I2Q8NH67 350 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 CAPSLQ8WWF8 208 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 EDARADDQ8WWZ3 215 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 TMEM158Q8WZ71 300 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 MRPL20Q9BYC9 149 aaKnown RBP10.23□□□□□ -0.77
SS18-202ENST00000269138 MMP27Q9H306 513 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 SCPEP1Q9HB40 452 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 FAM90A9PA6NNJ1 464 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 PROP1O75360 226 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 SNRNP70P08621 437 aaKnown RBP10.23□□□□□ -0.77
SS18-202ENST00000269138 CTXN2P0C2S0 81 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 DGCR2P98153 550 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 RELBQ01201 579 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 KRTAP21-3Q3LHN1 58 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 C5orf30Q96GV9 206 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 SOSTQ9BQB4 213 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 KLK11Q9UBX7 282 aa10.23□□□□□ -0.77
SS18-202ENST00000269138 IGKV1D-13A0A0B4J2D9 117 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 SULT1C2O00338 296 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 RAB29O14966 203 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 TPPPO94811 219 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 PMP2P02689 132 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 OR5H8P0DN80 308 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 IGKV1-13P0DP09 117 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 HLA-DMAP28067 261 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 RFX2P48378 723 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 ARHGDIBP52566 201 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 LINC00205P59089 165 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 IL18Q14116 193 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 HABP2Q14520 560 aaPredicted RBP10.22□□□□□ -0.77
SS18-202ENST00000269138 HNF4GQ14541 408 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 CDK10Q15131 360 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 OR5AP2Q8NGF4 316 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 NABP2Q9BQ15 211 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 C1RLQ9NZP8 487 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 PIPOXQ9P0Z9 390 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 ZNF221Q9UK13 617 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 A3GALT2U3KPV4 340 aa10.22□□□□□ -0.77
SS18-202ENST00000269138 TUSC2O75896 110 aa10.21□□□□□ -0.78
SS18-202ENST00000269138 IGKV1D-33P01593 117 aa10.21□□□□□ -0.78
SS18-202ENST00000269138 IGKV1-33P01594 117 aa10.21□□□□□ -0.78
SS18-202ENST00000269138 CRYBA1P05813 215 aa10.21□□□□□ -0.78
SS18-202ENST00000269138 CT45A6P0DMU7 189 aa10.21□□□□□ -0.78
SS18-202ENST00000269138 CT45A5P0DMU8 189 aa10.21□□□□□ -0.78
SS18-202ENST00000269138 CT45A7P0DMV0 189 aa10.21□□□□□ -0.78
SS18-202ENST00000269138 AADACP22760 399 aa10.21□□□□□ -0.78
SS18-202ENST00000269138 FCGR2CP31995 323 aa10.21□□□□□ -0.78
SS18-202ENST00000269138 GPR12P47775 334 aa10.21□□□□□ -0.78
SS18-202ENST00000269138 ACTG1P63261 375 aa10.21□□□□□ -0.78
SS18-202ENST00000269138 PYHIN1Q6K0P9 492 aa10.21□□□□□ -0.78
SS18-202ENST00000269138 GLDNQ6ZMI3 551 aaPredicted RBP10.21□□□□□ -0.78
SS18-202ENST00000269138 THNSL2Q86YJ6 484 aa10.21□□□□□ -0.78
SS18-202ENST00000269138 DRAXINQ8NBI3 349 aaPredicted RBP10.21□□□□□ -0.78
SS18-202ENST00000269138 S1PR3Q99500 378 aa10.21□□□□□ -0.78
SS18-202ENST00000269138 OR2D2Q9H210 308 aa10.21□□□□□ -0.78
SS18-202ENST00000269138 NECAP2Q9NVZ3 263 aa10.21□□□□□ -0.78
SS18-202ENST00000269138 OR2W1Q9Y3N9 320 aa10.21□□□□□ -0.78
SS18-202ENST00000269138 RBM7Q9Y580 266 aaKnown RBP10.21□□□□□ -0.78
SS18-202ENST00000269138 FABP12A6NFH5 140 aa10.2□□□□□ -0.78
SS18-202ENST00000269138 FAM106CPP0CH98 169 aa10.2□□□□□ -0.78
SS18-202ENST00000269138 HKR1P10072 659 aa10.2□□□□□ -0.78
SS18-202ENST00000269138 RCVRNP35243 200 aa10.2□□□□□ -0.78
SS18-202ENST00000269138 HRH1P35367 487 aa10.2□□□□□ -0.78
SS18-202ENST00000269138 LSAMPQ13449 338 aa10.2□□□□□ -0.78
SS18-202ENST00000269138 HES1Q14469 280 aa10.2□□□□□ -0.78
SS18-202ENST00000269138 DHRS7BQ6IAN0 325 aaPredicted RBP10.2□□□□□ -0.78
SS18-202ENST00000269138 OVCH2Q7RTZ1 564 aa10.2□□□□□ -0.78
SS18-202ENST00000269138 OR6Q1Q8NGQ2 317 aa10.2□□□□□ -0.78
SS18-202ENST00000269138 OR5H2Q8NGV7 314 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms