RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 Q96M66 194 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 RASL11BQ9BPW5 248 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 HEXA-AS1Q9H8Q6 139 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 EP300Q09472 2414 aaPredicted RBP9.29□□□□□ -0.92
CD44-201ENST00000263398 C16orf97H3BN30 126 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 IGHMP01871 453 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 COL10A1Q03692 680 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 RIGQ13278 110 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 RHOVQ96L33 236 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 PKIBQ9C010 78 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 SPTBN1Q01082 2364 aaKnown RBP9.29□□□□□ -0.92
CD44-201ENST00000263398 SMUG1Q53HV7 270 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 TPRX1Q8N7U7 411 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 OR8B3Q8NGG8 313 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 OR8B2Q96RD0 313 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 AURKAIP1Q9NWT8 199 aaPredicted RBP9.29□□□□□ -0.92
CD44-201ENST00000263398 WASHC3Q9Y3C0 194 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 OR2T8A6NH00 312 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 NPIPB9F8W1W9 429 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 SMPD2O60906 423 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 OR2H2O95918 312 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 NAT1P18440 290 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 OR10J1P30954 320 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 LGALS7P47929 136 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 OR8I2Q8N0Y5 310 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 Q8WTZ3 238 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 DNASE2BQ8WZ79 361 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 STARD4Q96DR4 205 aa9.29□□□□□ -0.92
CD44-201ENST00000263398 LCTP09848 1927 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 TMEM229AB2RXF0 380 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 FAM90A26D6RGX4 464 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 CD8AP01732 235 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 MPV17P39210 176 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 SNAI3Q3KNW1 292 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 SSX8Q7RTT4 187 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 ZNF383Q8NA42 475 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 LRRC75AQ8NAA5 344 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 MS4A3Q96HJ5 214 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 OR2V2Q96R30 315 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 M0QZK8 103 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 GGCTO75223 188 aaKnown RBP9.28□□□□□ -0.92
CD44-201ENST00000263398 PGLYRP1O75594 196 aaPredicted RBP9.28□□□□□ -0.92
CD44-201ENST00000263398 PKIAP61925 76 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 C16orf82Q7Z2V1 217 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 TAF15Q92804 592 aaKnown RBP eCLIP9.28□□□□□ -0.92
CD44-201ENST00000263398 DLL3Q9NYJ7 618 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 LOC285556D6RIA3 1793 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 A0A0G2JK05 382 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 ISLRO14498 428 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 COX5BP10606 129 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 SAXO1Q8IYX7 474 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 OR1L1Q8NH94 360 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 POM121Q96HA1 1249 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 SPSB2Q99619 263 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 PRDM14Q9GZV8 571 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 PXMP4Q9Y6I8 212 aa9.28□□□□□ -0.92
CD44-201ENST00000263398 IGHV3OR15-7A0A075B7D8 119 aa9.27□□□□□ -0.92
CD44-201ENST00000263398 A0A1W2PRD5 423 aa9.27□□□□□ -0.92
CD44-201ENST00000263398 A0A1W2PRF3 423 aa9.27□□□□□ -0.92
CD44-201ENST00000263398 A0A1W2PRM7 423 aa9.27□□□□□ -0.92
CD44-201ENST00000263398 PRSS1P07477 247 aa9.27□□□□□ -0.92
CD44-201ENST00000263398 HOXB1P14653 301 aaPredicted RBP9.27□□□□□ -0.92
CD44-201ENST00000263398 UCP3P55916 312 aa9.27□□□□□ -0.92
CD44-201ENST00000263398 LDLRAD3Q86YD5 345 aa9.27□□□□□ -0.92
CD44-201ENST00000263398 FGFRL1Q8N441 504 aa9.27□□□□□ -0.92
CD44-201ENST00000263398 OR51B2Q9Y5P1 312 aa9.27□□□□□ -0.92
CD44-201ENST00000263398 LOC390937A0A1W2PQ73 354 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 F5H697 171 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 K7N7A8 449 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 SIGLEC5O15389 551 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 Q1RN00 199 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 SAP25Q8TEE9 199 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 GPR146Q96CH1 333 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 P2RX4Q99571 388 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 ASCL3Q9NQ33 180 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 PCNTO95613 3336 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 PPIAL4EA0A075B759 164 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 PPIAL4DF5H284 164 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 SEMA7AO75326 666 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 PPIAL4FP0DN26 164 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 LBHQ53QV2 105 aaPredicted RBP9.27□□□□□ -0.93
CD44-201ENST00000263398 APCDD1LQ8NCL9 501 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 FAM117AQ9C073 453 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 PPIAL4AQ9Y536 164 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 DOCK6Q96HP0 2047 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 A0A1W2PR77 199 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 RPS11P62280 158 aaKnown RBP eCLIP9.27□□□□□ -0.93
CD44-201ENST00000263398 C10orf128Q5T292 105 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 OR4C12Q96R67 309 aa9.27□□□□□ -0.93
CD44-201ENST00000263398 SLC25A10Q9UBX3 287 aaPredicted RBP9.27□□□□□ -0.93
CD44-201ENST00000263398 SPAARA0A1B0GVQ0 90 aa9.26□□□□□ -0.93
CD44-201ENST00000263398 A0A1W2PPE3 182 aa9.26□□□□□ -0.93
CD44-201ENST00000263398 TMEM97Q5BJF2 176 aa9.26□□□□□ -0.93
CD44-201ENST00000263398 WDFY1Q8IWB7 410 aa9.26□□□□□ -0.93
CD44-201ENST00000263398 GCSAMQ8N6F7 178 aa9.26□□□□□ -0.93
CD44-201ENST00000263398 OR2D3Q8NGH3 330 aa9.26□□□□□ -0.93
CD44-201ENST00000263398 ANK1P16157 1881 aa9.26□□□□□ -0.93
CD44-201ENST00000263398 A0A1W2PQM1 296 aa9.26□□□□□ -0.93
CD44-201ENST00000263398 NDUFB4O95168 129 aa9.26□□□□□ -0.93
CD44-201ENST00000263398 MT-ND6P03923 174 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms