RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 IGKV3-11P04433 115 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 TSPAN7P41732 249 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 SLC25A45Q8N413 288 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 FGF11Q92914 225 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 SCN3AQ9NY46 2000 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 CDS2O95674 445 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 BTF3P20290 206 aaKnown RBP10.45□□□□□ -0.74
COL8A1-201ENST00000261037 LYRM7Q5U5X0 104 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 PILRAQ9UKJ1 303 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 A0A087X0M5 115 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 A0A1B0GX30 115 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 DXOO77932 396 aaKnown RBP10.45□□□□□ -0.74
COL8A1-201ENST00000261037 ZNF735P0CB33 412 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 PGA5P0DJD9 388 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 OR1N2Q8NGR9 330 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 B4DEV8 164 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 RPL27AP46776 148 aaKnown RBP10.45□□□□□ -0.74
COL8A1-201ENST00000261037 FGF12P61328 243 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 ZNF107Q9UII5 783 aaPredicted RBP10.45□□□□□ -0.74
COL8A1-201ENST00000261037 TNFSF18Q9UNG2 199 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 ZNF638Q14966 1978 aaKnown RBP10.45□□□□□ -0.74
COL8A1-201ENST00000261037 H7C2G1 150 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 GAPDHP04406 335 aaKnown RBP10.45□□□□□ -0.74
COL8A1-201ENST00000261037 OR4C12Q96R67 309 aa10.45□□□□□ -0.74
COL8A1-201ENST00000261037 MYO16Q9Y6X6 1858 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 UBE2L6O14933 153 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 CXCL2P19875 107 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 LRRC75BQ2VPJ9 315 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 TM4SF20Q53R12 229 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 TLNRD1Q9H1K6 362 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 ELF5Q9UKW6 265 aaPredicted RBP10.44□□□□□ -0.74
COL8A1-201ENST00000261037 TMPRSS3P57727 454 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 CYB561D1Q8N8Q1 229 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 ZNF502Q8TBZ5 544 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 IFITM10A6NMD0 228 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 SSTR5P35346 364 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 EBLN2Q6P2I7 272 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 WDFY1Q8IWB7 410 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 H3BTX0 84 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 M0R143 59 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 FAM106CPP0CH98 169 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 FAM74A3Q4VXF1 159 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 SMUG1Q53HV7 270 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 UNQ5815/PRO19632Q6UWF5 114 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 OR4A5Q8NH83 315 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 METTL26Q96S19 204 aa10.44□□□□□ -0.74
COL8A1-201ENST00000261037 SF3B6Q9Y3B4 125 aaKnown RBP10.44□□□□□ -0.74
COL8A1-201ENST00000261037 TRIP12Q14669 1992 aaPredicted RBP10.44□□□□□ -0.74
COL8A1-201ENST00000261037 MIA3Q5JRA6 1907 aa10.43□□□□□ -0.74
COL8A1-201ENST00000261037 MGST3O14880 152 aa10.43□□□□□ -0.74
COL8A1-201ENST00000261037 NGFRP08138 427 aa10.43□□□□□ -0.74
COL8A1-201ENST00000261037 KIR2DL2P43627 348 aaPredicted RBP10.43□□□□□ -0.74
COL8A1-201ENST00000261037 OR10J6PQ8NGY7 276 aa10.43□□□□□ -0.74
COL8A1-201ENST00000261037 SIRT7Q9NRC8 400 aa10.43□□□□□ -0.74
COL8A1-201ENST00000261037 A0A0U1RQV5 110 aa10.43□□□□□ -0.74
COL8A1-201ENST00000261037 ZIC3O60481 467 aa10.43□□□□□ -0.74
COL8A1-201ENST00000261037 CA11O75493 328 aa10.43□□□□□ -0.74
COL8A1-201ENST00000261037 PRDM6Q9NQX0 595 aa10.43□□□□□ -0.74
COL8A1-201ENST00000261037 PRR33A8MZF0 331 aa10.43□□□□□ -0.74
COL8A1-201ENST00000261037 ZNF324O75467 553 aaPredicted RBP10.43□□□□□ -0.74
COL8A1-201ENST00000261037 NDUFB4O95168 129 aa10.43□□□□□ -0.74
COL8A1-201ENST00000261037 ZNF25P17030 456 aaPredicted RBP10.43□□□□□ -0.74
COL8A1-201ENST00000261037 LIMS1P48059 325 aa10.43□□□□□ -0.74
COL8A1-201ENST00000261037 ZNF343Q6P1L6 599 aa10.43□□□□□ -0.74
COL8A1-201ENST00000261037 BPIFA4PQ86YQ2 179 aa10.43□□□□□ -0.74
COL8A1-201ENST00000261037 WISP3O95389 354 aaPredicted RBP10.43□□□□□ -0.74
COL8A1-201ENST00000261037 CD74P04233 296 aa10.43□□□□□ -0.74
COL8A1-201ENST00000261037 LINC00869P0C866 280 aa10.43□□□□□ -0.74
COL8A1-201ENST00000261037 RRN3P1Q2M238 152 aa10.43□□□□□ -0.74
COL8A1-201ENST00000261037 VKORC1L1Q8N0U8 176 aa10.43□□□□□ -0.74
COL8A1-201ENST00000261037 DIRC2Q96SL1 478 aa10.43□□□□□ -0.74
COL8A1-201ENST00000261037 RBBP6Q7Z6E9 1792 aaKnown RBP10.43□□□□□ -0.74
COL8A1-201ENST00000261037 C17orf51A8MQB3 221 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 OR2A4O95047 310 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 KLK2P20151 261 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 UQCRFS1P47985 274 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 IZUMO4Q1ZYL8 232 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 RSPO4Q2I0M5 234 aaPredicted RBP10.42□□□□□ -0.74
COL8A1-201ENST00000261037 TMEM78Q5T7P6 136 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 MIC13Q5XKP0 118 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 CHAC2Q8WUX2 184 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 OR2A7Q96R45 310 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 H0Y980 276 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 HOXA6P31267 233 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 SLC25A47Q6Q0C1 308 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 STXBP6Q8NFX7 210 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 NPVFQ9HCQ7 196 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 IDI2-AS1Q9NZ38 188 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 KLF7O75840 302 aaPredicted RBP10.42□□□□□ -0.74
COL8A1-201ENST00000261037 COX6A1P12074 109 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 FCGR2BP31994 310 aaPredicted RBP10.42□□□□□ -0.74
COL8A1-201ENST00000261037 MPV17P39210 176 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 GCSAMQ8N6F7 178 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 PGLYRP4Q96LB8 373 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 KCNK17Q96T54 332 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 F5P12259 2224 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 DLL1O00548 723 aa10.42□□□□□ -0.74
COL8A1-201ENST00000261037 SMAD7O15105 426 aaKnown RBP10.42□□□□□ -0.74
COL8A1-201ENST00000261037 SS18L1O75177 396 aaPredicted RBP10.42□□□□□ -0.74
COL8A1-201ENST00000261037 SFTPCP11686 197 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms