RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 SP5Q6BEB4 398 aaPredicted RBP14.74□□□□□ -0.05
SSB-201ENST00000260956 TMEM252Q8N6L7 170 aa14.74□□□□□ -0.05
SSB-201ENST00000260956 OR51H1Q8NH63 302 aa14.74□□□□□ -0.05
SSB-201ENST00000260956 SCRT1Q9BWW7 348 aa14.74□□□□□ -0.05
SSB-201ENST00000260956 UFSP2Q9NUQ7 469 aa14.74□□□□□ -0.05
SSB-201ENST00000260956 CARHSP1Q9Y2V2 147 aaKnown RBP14.74□□□□□ -0.05
SSB-201ENST00000260956 LRBAP50851 2863 aa14.74□□□□□ -0.05
SSB-201ENST00000260956 A0A1B0GU03 582 aa14.73□□□□□ -0.05
SSB-201ENST00000260956 A6NLC8 198 aa14.73□□□□□ -0.05
SSB-201ENST00000260956 FAM157AC9JC47 383 aa14.73□□□□□ -0.05
SSB-201ENST00000260956 FBXO24O75426 580 aa14.73□□□□□ -0.05
SSB-201ENST00000260956 MED6O75586 246 aa14.73□□□□□ -0.05
SSB-201ENST00000260956 DANCRP0C864 163 aa14.73□□□□□ -0.05
SSB-201ENST00000260956 P0C879 139 aa14.73□□□□□ -0.05
SSB-201ENST00000260956 CAV2P51636 162 aa14.73□□□□□ -0.05
SSB-201ENST00000260956 COL10A1Q03692 680 aa14.73□□□□□ -0.05
SSB-201ENST00000260956 AESQ08117 197 aa14.73□□□□□ -0.05
SSB-201ENST00000260956 GNMTQ14749 295 aa14.73□□□□□ -0.05
SSB-201ENST00000260956 FAM53AQ6NSI3 398 aaPredicted RBP14.73□□□□□ -0.05
SSB-201ENST00000260956 FAM90A1Q86YD7 464 aa14.73□□□□□ -0.05
SSB-201ENST00000260956 LRRC29Q8WV35 223 aa14.73□□□□□ -0.05
SSB-201ENST00000260956 OOEPA6NGQ2 149 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 C15orf65H3BRN8 121 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 SSSCA1O60232 199 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 HBZP02008 142 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 S100GP29377 79 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 FBXL19-AS1Q494R0 122 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 TSNAXQ99598 290 aaKnown RBP14.72□□□□□ -0.05
SSB-201ENST00000260956 MAGT1Q9H0U3 335 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 IGKV1D-17A0A075B6S4 117 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 BORCS7-ASMTA0A0B4J1R7 106 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 PIGBOS1A0A0B4J2F0 54 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 M0R1B8 84 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 OR8U9P0C7N5 309 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 MUC1P15941 1255 aaPredicted RBP14.72□□□□□ -0.05
SSB-201ENST00000260956 CEACAM6P40199 344 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 BLOC1S1P78537 153 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 MZT1Q08AG7 82 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 FAM27E3Q08E93 113 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 ZNF787Q6DD87 383 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 PRR18Q8N4B5 295 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 GCSAMQ8N6F7 178 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 OR8U1Q8NH10 309 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 SH3BGRL3Q9H299 93 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 PLEKHF2Q9H8W4 249 aa14.72□□□□□ -0.05
SSB-201ENST00000260956 LIN7CQ9NUP9 197 aaKnown RBP14.72□□□□□ -0.05
SSB-201ENST00000260956 NOTCH2Q04721 2471 aa14.71□□□□□ -0.05
SSB-201ENST00000260956 LHBP01229 141 aa14.71□□□□□ -0.05
SSB-201ENST00000260956 APOC3P02656 99 aa14.71□□□□□ -0.05
SSB-201ENST00000260956 CD5P06127 495 aa14.71□□□□□ -0.05
SSB-201ENST00000260956 GLIPR1P48060 266 aa14.71□□□□□ -0.05
SSB-201ENST00000260956 ASCL1P50553 236 aa14.71□□□□□ -0.05
SSB-201ENST00000260956 ZNF273Q14593 569 aa14.71□□□□□ -0.05
SSB-201ENST00000260956 CR1LQ2VPA4 569 aa14.71□□□□□ -0.05
SSB-201ENST00000260956 Q6ZRG5 221 aa14.71□□□□□ -0.05
SSB-201ENST00000260956 OR2Z1Q8NG97 314 aa14.71□□□□□ -0.05
SSB-201ENST00000260956 OR13A1Q8NGR1 328 aa14.71□□□□□ -0.05
SSB-201ENST00000260956 MEGF10Q96KG7 1140 aa14.71□□□□□ -0.05
SSB-201ENST00000260956 LURAP1Q96LR2 239 aa14.71□□□□□ -0.05
SSB-201ENST00000260956 PPP1R3CQ9UQK1 317 aa14.71□□□□□ -0.05
SSB-201ENST00000260956 K7N7A8 449 aa14.7□□□□□ -0.06
SSB-201ENST00000260956 DNASE2O00115 360 aaPredicted RBP14.7□□□□□ -0.06
SSB-201ENST00000260956 HSPA12AO43301 675 aa14.7□□□□□ -0.06
SSB-201ENST00000260956 ATG12O94817 140 aa14.7□□□□□ -0.06
SSB-201ENST00000260956 GATA4P43694 442 aa14.7□□□□□ -0.06
SSB-201ENST00000260956 AKR1C2P52895 323 aa14.7□□□□□ -0.06
SSB-201ENST00000260956 BRWD1-AS2P59051 145 aa14.7□□□□□ -0.06
SSB-201ENST00000260956 AKR1C1Q04828 323 aa14.7□□□□□ -0.06
SSB-201ENST00000260956 IZUMO4Q1ZYL8 232 aa14.7□□□□□ -0.06
SSB-201ENST00000260956 ZNF645Q8N7E2 425 aa14.7□□□□□ -0.06
SSB-201ENST00000260956 ZBTB34Q8NCN2 500 aa14.7□□□□□ -0.06
SSB-201ENST00000260956 OR52L2PQ8NGH6 319 aa14.7□□□□□ -0.06
SSB-201ENST00000260956 LRRC46Q96FV0 321 aa14.7□□□□□ -0.06
SSB-201ENST00000260956 KCNIP1Q9NZI2 227 aa14.7□□□□□ -0.06
SSB-201ENST00000260956 ATP6V1G2-DDX39BF2Z307 99 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 SERPINE2P07093 398 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 PVALBP20472 110 aaPredicted RBP14.69□□□□□ -0.06
SSB-201ENST00000260956 F2RL1P55085 397 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 BAXQ07812 192 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 BTN1A1Q13410 526 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 RNASE6Q93091 150 aaKnown RBP14.69□□□□□ -0.06
SSB-201ENST00000260956 GALMQ96C23 342 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 HRH4Q9H3N8 390 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 FAM212BQ9NTI7 297 aaPredicted RBP14.69□□□□□ -0.06
SSB-201ENST00000260956 CACFD1Q9UGQ2 172 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 PLCE1Q9P212 2302 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 USF3Q68DE3 2245 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 CYSRT1A8MQ03 144 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 CHST1O43916 411 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 CRYAAP02489 173 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 EPHA1P21709 976 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 PRDX2P32119 198 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 KLF3P57682 345 aaPredicted RBP14.69□□□□□ -0.06
SSB-201ENST00000260956 RPL30P62888 115 aaKnown RBP14.69□□□□□ -0.06
SSB-201ENST00000260956 DMRTC2Q8IXT2 367 aaPredicted RBP14.69□□□□□ -0.06
SSB-201ENST00000260956 MRGPRDQ8TDS7 321 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 FAM222BQ8WU58 562 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 SLC25A31Q9H0C2 315 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 UQCC1Q9NVA1 299 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 KCNS2Q9ULS6 477 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms