RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 J3QR06 171 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 ARPC1BO15143 372 aaKnown RBP12.73□□□□□ -0.37
GYPC-201ENST00000259254 MMP9P14780 707 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 PI3P19957 117 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 GPR12P47775 334 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 SURF2Q15527 256 aaPredicted RBP12.73□□□□□ -0.37
GYPC-201ENST00000259254 Q3ZCU0 254 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 ABCA11PQ4W5N1 156 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 LY6G6FQ5SQ64 297 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 LPCAT3Q6P1A2 487 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 SLC38A6Q8IZM9 456 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 LYG1Q8N1E2 194 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 ZNF439Q8NDP4 499 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 ZFAND1Q8TCF1 268 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 LHX4Q969G2 390 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 MRGPRFQ96AM1 343 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 ABHD14BQ96IU4 210 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 C20orf85Q9H1P6 137 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 CCL28Q9NRJ3 127 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 NUDT15Q9NV35 164 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 ZNRD1Q9P1U0 126 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 FLVCR2Q9UPI3 526 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 NUBP2Q9Y5Y2 271 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 MALRD1Q5VYJ5 2156 aa12.73□□□□□ -0.37
GYPC-201ENST00000259254 NSD1Q96L73 2696 aaPredicted RBP12.73□□□□□ -0.37
GYPC-201ENST00000259254 J3QLI3 93 aa12.72□□□□□ -0.37
GYPC-201ENST00000259254 ITGB1BP1O14713 200 aa12.72□□□□□ -0.37
GYPC-201ENST00000259254 ARG1P05089 322 aa12.72□□□□□ -0.37
GYPC-201ENST00000259254 H2AFB2P0C5Z0 115 aa12.72□□□□□ -0.37
GYPC-201ENST00000259254 IL3RAP26951 378 aa12.72□□□□□ -0.37
GYPC-201ENST00000259254 CD34P28906 385 aa12.72□□□□□ -0.37
GYPC-201ENST00000259254 ZNF134P52741 427 aa12.72□□□□□ -0.37
GYPC-201ENST00000259254 UCP3P55916 312 aa12.72□□□□□ -0.37
GYPC-201ENST00000259254 CCBE1Q6UXH8 406 aaPredicted RBP12.72□□□□□ -0.37
GYPC-201ENST00000259254 SLC25A48Q6ZT89 311 aaKnown RBP12.72□□□□□ -0.37
GYPC-201ENST00000259254 ZDHHC22Q8N966 263 aa12.72□□□□□ -0.37
GYPC-201ENST00000259254 ZNF596Q8TC21 504 aa12.72□□□□□ -0.37
GYPC-201ENST00000259254 IFI27L2Q9H2X8 130 aa12.72□□□□□ -0.37
GYPC-201ENST00000259254 UNKLQ9H9P5 680 aaKnown RBP12.72□□□□□ -0.37
GYPC-201ENST00000259254 VSIG4Q9Y279 399 aa12.72□□□□□ -0.37
GYPC-201ENST00000259254 RNASEK-C17orf49H0YIS7 233 aa12.71□□□□□ -0.37
GYPC-201ENST00000259254 CTSDP07339 412 aaPredicted RBP12.71□□□□□ -0.37
GYPC-201ENST00000259254 S100GP29377 79 aa12.71□□□□□ -0.37
GYPC-201ENST00000259254 RAB25P57735 213 aa12.71□□□□□ -0.37
GYPC-201ENST00000259254 PHLDA2Q53GA4 152 aa12.71□□□□□ -0.37
GYPC-201ENST00000259254 LDLRAD3Q86YD5 345 aa12.71□□□□□ -0.37
GYPC-201ENST00000259254 CMTM1Q8IZ96 169 aa12.71□□□□□ -0.37
GYPC-201ENST00000259254 CENPSQ8N2Z9 138 aa12.71□□□□□ -0.37
GYPC-201ENST00000259254 ZNF645Q8N7E2 425 aa12.71□□□□□ -0.37
GYPC-201ENST00000259254 C8orf31Q8N9H6 132 aa12.71□□□□□ -0.37
GYPC-201ENST00000259254 MINDY2Q8NBR6 621 aa12.71□□□□□ -0.37
GYPC-201ENST00000259254 DUSP18Q8NEJ0 188 aa12.71□□□□□ -0.37
GYPC-201ENST00000259254 FAM216AQ8WUB2 273 aa12.71□□□□□ -0.37
GYPC-201ENST00000259254 TNFRSF14Q92956 283 aa12.71□□□□□ -0.37
GYPC-201ENST00000259254 GPR132Q9UNW8 380 aa12.71□□□□□ -0.37
GYPC-201ENST00000259254 AMMECR1Q9Y4X0 333 aaPredicted RBP12.71□□□□□ -0.37
GYPC-201ENST00000259254 FN1P02751 2386 aaKnown RBP12.71□□□□□ -0.38
GYPC-201ENST00000259254 NIPBLQ6KC79 2804 aaeCLIP12.7□□□□□ -0.387e-7■■■■□ 21.5
GYPC-201ENST00000259254 IGHV3OR16-10A0A075B7F0 116 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 GPR31O00270 319 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 RAB29O14966 203 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 TNFSF12O43508 249 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 SLC22A5O76082 557 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 AKR1C4P17516 323 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 GNRHRP30968 328 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 LGALS4P56470 323 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 OXA1LQ15070 435 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 HLA-DRB5Q30154 266 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 HCP5Q6MZN7 132 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 ZNF818PQ6ZRF7 136 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 LINC00311Q8N616 119 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 CCDC71LQ8N9Z2 235 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 BEND2Q8NDZ0 799 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 OR11H6Q8NGC7 330 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 CHPT1Q8WUD6 406 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 UPRTQ96BW1 309 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 AKR1E2Q96JD6 320 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 AGMATQ9BSE5 352 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 RSRP1Q9BUV0 290 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 BEX2Q9BXY8 128 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 BEX1Q9HBH7 125 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 PIPOXQ9P0Z9 390 aa12.7□□□□□ -0.38
GYPC-201ENST00000259254 NAV3Q8IVL0 2385 aa12.69□□□□□ -0.38
GYPC-201ENST00000259254 SAA2-SAA4A0A096LPE2 208 aa12.69□□□□□ -0.38
GYPC-201ENST00000259254 TRAV40A0A0B4J280 105 aa12.69□□□□□ -0.38
GYPC-201ENST00000259254 INMT-MINDY4F8WBC2 141 aa12.69□□□□□ -0.38
GYPC-201ENST00000259254 M0R1X1 148 aa12.69□□□□□ -0.38
GYPC-201ENST00000259254 SAA2P0DJI9 122 aaPredicted RBP12.69□□□□□ -0.38
GYPC-201ENST00000259254 ANXA7P20073 488 aaKnown RBP12.69□□□□□ -0.38
GYPC-201ENST00000259254 UBE2E1P51965 193 aa12.69□□□□□ -0.38
GYPC-201ENST00000259254 TAS2R31P59538 309 aa12.69□□□□□ -0.38
GYPC-201ENST00000259254 KRTAP1-1Q07627 177 aa12.69□□□□□ -0.38
GYPC-201ENST00000259254 RPL39P5Q59GN2 51 aa12.69□□□□□ -0.38
GYPC-201ENST00000259254 GPR157Q5UAW9 335 aa12.69□□□□□ -0.38
GYPC-201ENST00000259254 DRAM1Q8N682 238 aa12.69□□□□□ -0.38
GYPC-201ENST00000259254 ADAD2Q8NCV1 583 aaKnown RBP12.69□□□□□ -0.38
GYPC-201ENST00000259254 ZNF486Q96H40 463 aaPredicted RBP12.69□□□□□ -0.38
GYPC-201ENST00000259254 S1PR3Q99500 378 aa12.69□□□□□ -0.38
GYPC-201ENST00000259254 GHITMQ9H3K2 345 aa12.69□□□□□ -0.38
GYPC-201ENST00000259254 C5orf66Q9H5L9 145 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms