RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 IGHV3-43A0A0B4J1X8 118 aa14.41□□□□□ -0.1
SRSF1-201ENST00000258962 SPINT2O43291 252 aa14.41□□□□□ -0.1
SRSF1-201ENST00000258962 IGHV3-43DP0DP04 118 aa14.41□□□□□ -0.1
SRSF1-201ENST00000258962 PPP1CCP36873 323 aaKnown RBP14.41□□□□□ -0.1
SRSF1-201ENST00000258962 HTD2P86397 168 aa14.41□□□□□ -0.1
SRSF1-201ENST00000258962 C17orf58Q2M2W7 97 aa14.41□□□□□ -0.1
SRSF1-201ENST00000258962 GLYATL2Q8WU03 294 aa14.41□□□□□ -0.1
SRSF1-201ENST00000258962 SEC22AQ96IW7 307 aa14.41□□□□□ -0.1
SRSF1-201ENST00000258962 SMR3AQ99954 134 aa14.41□□□□□ -0.1
SRSF1-201ENST00000258962 SUCNR1Q9BXA5 334 aa14.41□□□□□ -0.1
SRSF1-201ENST00000258962 GSX1Q9H4S2 264 aaPredicted RBP14.41□□□□□ -0.1
SRSF1-201ENST00000258962 CALYQ9NYX4 217 aa14.41□□□□□ -0.1
SRSF1-201ENST00000258962 CTSZQ9UBR2 303 aa14.41□□□□□ -0.1
SRSF1-201ENST00000258962 CSPG4Q6UVK1 2322 aa14.4□□□□□ -0.1
SRSF1-201ENST00000258962 TRAV14DV4A0A0A6YYC5 116 aa14.4□□□□□ -0.1
SRSF1-201ENST00000258962 C3orf85A0A1B0GTC6 90 aa14.4□□□□□ -0.1
SRSF1-201ENST00000258962 C5orf51A6NDU8 294 aa14.4□□□□□ -0.1
SRSF1-201ENST00000258962 MPTX1A8MV57 137 aa14.4□□□□□ -0.1
SRSF1-201ENST00000258962 FAM25EA8MYX2 175 aa14.4□□□□□ -0.1
SRSF1-201ENST00000258962 L7N2F9 121 aa14.4□□□□□ -0.1
SRSF1-201ENST00000258962 F2RL2O00254 374 aa14.4□□□□□ -0.1
SRSF1-201ENST00000258962 PHF1O43189 567 aaPredicted RBP14.4□□□□□ -0.1
SRSF1-201ENST00000258962 PGLYRP1O75594 196 aaPredicted RBP14.4□□□□□ -0.1
SRSF1-201ENST00000258962 OR8U9P0C7N5 309 aa14.4□□□□□ -0.1
SRSF1-201ENST00000258962 MRPS11P82912 194 aaKnown RBP14.4□□□□□ -0.1
SRSF1-201ENST00000258962 LIAT1Q6ZQX7 453 aa14.4□□□□□ -0.1
SRSF1-201ENST00000258962 OR8U1Q8NH10 309 aa14.4□□□□□ -0.1
SRSF1-201ENST00000258962 MSI2Q96DH6 328 aaKnown RBP14.4□□□□□ -0.1
SRSF1-201ENST00000258962 METTL8Q9H825 291 aaKnown RBP14.4□□□□□ -0.1
SRSF1-201ENST00000258962 OR2S2Q9NQN1 319 aa14.4□□□□□ -0.1
SRSF1-201ENST00000258962 SLC25A10Q9UBX3 287 aaPredicted RBP14.4□□□□□ -0.1
SRSF1-201ENST00000258962 ADAM20O43506 726 aa14.39□□□□□ -0.11
SRSF1-201ENST00000258962 TNFSF12O43508 249 aa14.39□□□□□ -0.11
SRSF1-201ENST00000258962 IFNA21P01568 189 aa14.39□□□□□ -0.11
SRSF1-201ENST00000258962 HOXB5P09067 269 aa14.39□□□□□ -0.11
SRSF1-201ENST00000258962 USF1P22415 310 aaPredicted RBP14.39□□□□□ -0.11
SRSF1-201ENST00000258962 SRPXP78539 464 aa14.39□□□□□ -0.11
SRSF1-201ENST00000258962 LTC4SQ16873 150 aa14.39□□□□□ -0.11
SRSF1-201ENST00000258962 LGALSLQ3ZCW2 172 aaPredicted RBP14.39□□□□□ -0.11
SRSF1-201ENST00000258962 TMEM65Q6PI78 240 aa14.39□□□□□ -0.11
SRSF1-201ENST00000258962 LRTM2Q8N967 370 aa14.39□□□□□ -0.11
SRSF1-201ENST00000258962 LHFPL5Q8TAF8 219 aa14.39□□□□□ -0.11
SRSF1-201ENST00000258962 NMES1Q9C002 83 aa14.39□□□□□ -0.11
SRSF1-201ENST00000258962 CHODLQ9H9P2 273 aa14.39□□□□□ -0.11
SRSF1-201ENST00000258962 KAAG1Q9UBP8 84 aa14.39□□□□□ -0.11
SRSF1-201ENST00000258962 TRGV10A0A0A0MS01 117 aa14.38□□□□□ -0.11
SRSF1-201ENST00000258962 C13orf42A0A1B0GVH6 325 aa14.38□□□□□ -0.11
SRSF1-201ENST00000258962 LY6G6DO95868 133 aa14.38□□□□□ -0.11
SRSF1-201ENST00000258962 IGHV2-70P01814 119 aa14.38□□□□□ -0.11
SRSF1-201ENST00000258962 SLC25A4P12235 298 aa14.38□□□□□ -0.11
SRSF1-201ENST00000258962 NDUFB7P17568 137 aa14.38□□□□□ -0.11
SRSF1-201ENST00000258962 LOXL3P58215 753 aa14.38□□□□□ -0.11
SRSF1-201ENST00000258962 LOXL1Q08397 574 aaPredicted RBP14.38□□□□□ -0.11
SRSF1-201ENST00000258962 CMTM1Q8IZ96 169 aa14.38□□□□□ -0.11
SRSF1-201ENST00000258962 DRAM1Q8N682 238 aa14.38□□□□□ -0.11
SRSF1-201ENST00000258962 THAP6Q8TBB0 222 aa14.38□□□□□ -0.11
SRSF1-201ENST00000258962 CORO2AQ92828 525 aa14.38□□□□□ -0.11
SRSF1-201ENST00000258962 C5orf30Q96GV9 206 aa14.38□□□□□ -0.11
SRSF1-201ENST00000258962 AKR1E2Q96JD6 320 aa14.38□□□□□ -0.11
SRSF1-201ENST00000258962 OR10C1Q96KK4 312 aa14.38□□□□□ -0.11
SRSF1-201ENST00000258962 BPESC1Q9GZL8 116 aa14.38□□□□□ -0.11
SRSF1-201ENST00000258962 JPT1Q9UK76 154 aa14.38□□□□□ -0.11
SRSF1-201ENST00000258962 KCNS2Q9ULS6 477 aa14.38□□□□□ -0.11
SRSF1-201ENST00000258962 RBM7Q9Y580 266 aaKnown RBP14.38□□□□□ -0.11
SRSF1-201ENST00000258962 FXYD6-FXYD2A0A087WZ82 144 aa14.37□□□□□ -0.11
SRSF1-201ENST00000258962 KBTBD11-OT1A0A1B0GTJ5 212 aa14.37□□□□□ -0.11
SRSF1-201ENST00000258962 VWC2LB2RUY7 222 aa14.37□□□□□ -0.11
SRSF1-201ENST00000258962 FSTL3O95633 263 aa14.37□□□□□ -0.11
SRSF1-201ENST00000258962 OMGP23515 440 aa14.37□□□□□ -0.11
SRSF1-201ENST00000258962 TMEM33P57088 247 aa14.37□□□□□ -0.11
SRSF1-201ENST00000258962 TMEM222Q9H0R3 208 aa14.37□□□□□ -0.11
SRSF1-201ENST00000258962 C19orf12Q9NSK7 152 aa14.37□□□□□ -0.11
SRSF1-201ENST00000258962 CLN8Q9UBY8 286 aa14.37□□□□□ -0.11
SRSF1-201ENST00000258962 VPS13CQ709C8 3753 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 DVL1O14640 695 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 NDUFB3O43676 98 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 WNT2P09544 360 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 PET100P0DJ07 73 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 RPA2P15927 270 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 F2RP25116 425 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 GGNBP1Q5YKI7 109 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 Q71RC1 249 aaPredicted RBP14.36□□□□□ -0.11
SRSF1-201ENST00000258962 LGI3Q8N145 548 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 ZNF645Q8N7E2 425 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 PPP1R1CQ8WVI7 109 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 C2orf50Q96LR7 162 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 OR2D2Q9H210 308 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 LINC00574Q9H8X3 128 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 RNF150Q9ULK6 438 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 A0A0D9SG52 128 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 ZNF729A6NN14 1252 aaPredicted RBP14.36□□□□□ -0.11
SRSF1-201ENST00000258962 H0Y980 276 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 PPIHO43447 177 aaKnown RBP14.36□□□□□ -0.11
SRSF1-201ENST00000258962 NDUFA2O43678 99 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 TSC22D2O75157 780 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 B3GALNT1O75752 331 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 IFNA7P01567 189 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 UCP1P25874 307 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 PSMB6P28072 239 aa14.36□□□□□ -0.11
SRSF1-201ENST00000258962 GPR6P46095 362 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms