RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 RALYQ9UKM9 306 aaKnown RBP22.99■■□□□ 1.27
CCM2-201ENST00000258781 RCL1Q9Y2P8 373 aaKnown RBP22.99■■□□□ 1.27
CCM2-201ENST00000258781 DOPEY1Q5JWR5 2465 aa22.99■■□□□ 1.27
CCM2-201ENST00000258781 F2RL2O00254 374 aa22.98■■□□□ 1.27
CCM2-201ENST00000258781 PDZD9Q8IXQ8 264 aa22.98■■□□□ 1.27
CCM2-201ENST00000258781 DMBX1Q8NFW5 382 aa22.98■■□□□ 1.27
CCM2-201ENST00000258781 EDARADDQ8WWZ3 215 aa22.98■■□□□ 1.27
CCM2-201ENST00000258781 EIF5AP63241 154 aaKnown RBP22.98■■□□□ 1.27
CCM2-201ENST00000258781 FAM53AQ6NSI3 398 aaPredicted RBP22.98■■□□□ 1.27
CCM2-201ENST00000258781 C1orf87Q8N0U7 546 aa22.98■■□□□ 1.27
CCM2-201ENST00000258781 DEFB108BQ8NET1 73 aa22.98■■□□□ 1.27
CCM2-201ENST00000258781 NEUROG1Q92886 237 aa22.98■■□□□ 1.27
CCM2-201ENST00000258781 C11orf1Q9H5F2 150 aa22.98■■□□□ 1.27
CCM2-201ENST00000258781 DYNLRB1Q9NP97 96 aa22.98■■□□□ 1.27
CCM2-201ENST00000258781 RNF150Q9ULK6 438 aa22.98■■□□□ 1.27
CCM2-201ENST00000258781 A0A1B0GU03 582 aa22.97■■□□□ 1.27
CCM2-201ENST00000258781 GPR137BO60478 399 aa22.97■■□□□ 1.27
CCM2-201ENST00000258781 ZNF585BQ52M93 769 aa22.97■■□□□ 1.27
CCM2-201ENST00000258781 TGIF2LYQ8IUE0 185 aa22.97■■□□□ 1.27
CCM2-201ENST00000258781 MS4A5Q9H3V2 200 aa22.97■■□□□ 1.27
CCM2-201ENST00000258781 RNF115Q9Y4L5 304 aa22.97■■□□□ 1.27
CCM2-201ENST00000258781 IGHV3-43A0A0B4J1X8 118 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 C19orf84I3L1E1 186 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 LGALS8O00214 317 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 SIGLEC5O15389 551 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 IGKV1-39P01597 117 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 GYPAP02724 150 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 IGKV1D-39P04432 117 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 CGB3P0DN86 165 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 CGB7P0DN87 165 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 IGHV3-43DP0DP04 118 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 SELLP14151 372 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 ZCCHC24Q8N2G6 241 aaKnown RBP22.96■■□□□ 1.27
CCM2-201ENST00000258781 C5orf30Q96GV9 206 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 DCAF16Q9NXF7 216 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 NKX6-3A6NJ46 265 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 DEFB108AA8MXU0 73 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 B9A039 149 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 YPEL1O60688 119 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 PLAUP00749 431 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 RNF224P0DH78 156 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 ZNF16P17020 682 aaPredicted RBP22.96■■□□□ 1.27
CCM2-201ENST00000258781 PVALBP20472 110 aaPredicted RBP22.96■■□□□ 1.27
CCM2-201ENST00000258781 ID3Q02535 119 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 CATR1Q13166 79 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 TCTEX1D1Q8N7M0 179 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 YPEL2Q96QA6 119 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 CCL13Q99616 98 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 FAM212BQ9NTI7 297 aaPredicted RBP22.96■■□□□ 1.27
CCM2-201ENST00000258781 CALYQ9NYX4 217 aa22.96■■□□□ 1.27
CCM2-201ENST00000258781 LRBAP50851 2863 aa22.95■■□□□ 1.26
CCM2-201ENST00000258781 TRAV38-1A0A0B4J264 116 aa22.95■■□□□ 1.26
CCM2-201ENST00000258781 A0A1B0GW55 424 aa22.95■■□□□ 1.26
CCM2-201ENST00000258781 GAPDHP04406 335 aaKnown RBP22.95■■□□□ 1.26
CCM2-201ENST00000258781 DUX4L2P0CJ85 424 aa22.95■■□□□ 1.26
CCM2-201ENST00000258781 DUX4L3P0CJ86 424 aa22.95■■□□□ 1.26
CCM2-201ENST00000258781 DUX4L4P0CJ87 422 aa22.95■■□□□ 1.26
CCM2-201ENST00000258781 DUX4L5P0CJ88 424 aa22.95■■□□□ 1.26
CCM2-201ENST00000258781 DUX4L6P0CJ89 424 aa22.95■■□□□ 1.26
CCM2-201ENST00000258781 DUX4L7P0CJ90 424 aa22.95■■□□□ 1.26
CCM2-201ENST00000258781 GPR146Q96CH1 333 aa22.95■■□□□ 1.26
CCM2-201ENST00000258781 GNG12Q9UBI6 72 aa22.95■■□□□ 1.26
CCM2-201ENST00000258781 DUX4Q9UBX2 424 aa22.95■■□□□ 1.26
CCM2-201ENST00000258781 MEX3AA1L020 520 aaKnown RBP22.94■■□□□ 1.26
CCM2-201ENST00000258781 PITX3O75364 302 aa22.94■■□□□ 1.26
CCM2-201ENST00000258781 MMP9P14780 707 aa22.94■■□□□ 1.26
CCM2-201ENST00000258781 LOXP28300 417 aaPredicted RBP22.94■■□□□ 1.26
CCM2-201ENST00000258781 FAM74A1Q5RGS3 127 aa22.94■■□□□ 1.26
CCM2-201ENST00000258781 CXorf58Q96LI9 332 aa22.94■■□□□ 1.26
CCM2-201ENST00000258781 AGMATQ9BSE5 352 aa22.94■■□□□ 1.26
CCM2-201ENST00000258781 FBXL17Q9UF56 701 aa22.94■■□□□ 1.26
CCM2-201ENST00000258781 SPTAN1Q13813 2472 aaKnown RBP22.94■■□□□ 1.26
CCM2-201ENST00000258781 A0A0G2JRQ6 117 aa22.94■■□□□ 1.26
CCM2-201ENST00000258781 TMEM178BH3BS89 294 aa22.94■■□□□ 1.26
CCM2-201ENST00000258781 TMEM33P57088 247 aa22.94■■□□□ 1.26
CCM2-201ENST00000258781 MST1LQ2TV78 715 aa22.94■■□□□ 1.26
CCM2-201ENST00000258781 MORN2Q502X0 79 aa22.94■■□□□ 1.26
CCM2-201ENST00000258781 DUX4L9Q6RFH8 374 aaPredicted RBP22.94■■□□□ 1.26
CCM2-201ENST00000258781 ZNF66Q6ZN08 573 aa22.94■■□□□ 1.26
CCM2-201ENST00000258781 RNASE11Q8TAA1 199 aaKnown RBP22.94■■□□□ 1.26
CCM2-201ENST00000258781 PSG11Q9UQ72 335 aa22.94■■□□□ 1.26
CCM2-201ENST00000258781 TRGV10A0A0A0MS01 117 aa22.93■■□□□ 1.26
CCM2-201ENST00000258781 LOXL3P58215 753 aa22.93■■□□□ 1.26
CCM2-201ENST00000258781 CXorf66Q5JRM2 361 aaPredicted RBP22.93■■□□□ 1.26
CCM2-201ENST00000258781 FAM216BQ8N7L0 139 aa22.93■■□□□ 1.26
CCM2-201ENST00000258781 POLR2GP62487 172 aaKnown RBP eCLIP22.92■■□□□ 1.26
CCM2-201ENST00000258781 LRRC20Q8TCA0 184 aa22.92■■□□□ 1.26
CCM2-201ENST00000258781 HSD17B10Q99714 261 aaKnown RBP22.92■■□□□ 1.26
CCM2-201ENST00000258781 SDHAF2Q9NX18 166 aa22.92■■□□□ 1.26
CCM2-201ENST00000258781 PFDN2Q9UHV9 154 aa22.92■■□□□ 1.26
CCM2-201ENST00000258781 ITGB1BP1O14713 200 aa22.92■■□□□ 1.26
CCM2-201ENST00000258781 ST8SIA5O15466 376 aa22.92■■□□□ 1.26
CCM2-201ENST00000258781 IGKV1-5P01602 117 aa22.92■■□□□ 1.26
CCM2-201ENST00000258781 AKR1C2P52895 323 aa22.92■■□□□ 1.26
CCM2-201ENST00000258781 LTC4SQ16873 150 aa22.92■■□□□ 1.26
CCM2-201ENST00000258781 C17orf58Q2M2W7 97 aa22.92■■□□□ 1.26
CCM2-201ENST00000258781 RPL7L1Q6DKI1 246 aaKnown RBP22.92■■□□□ 1.26
CCM2-201ENST00000258781 TMEM106BQ9NUM4 274 aa22.92■■□□□ 1.26
CCM2-201ENST00000258781 CISD1Q9NZ45 108 aaKnown RBP22.92■■□□□ 1.26
CCM2-201ENST00000258781 PPIAL4EA0A075B759 164 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms