RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 A0A1B0GV50 99 aa11.43□□□□□ -0.58
PRPF38A-201ENST00000257181 RPL7P18124 248 aaKnown RBP11.43□□□□□ -0.58
PRPF38A-201ENST00000257181 FFAR4Q5NUL3 377 aa11.43□□□□□ -0.58
PRPF38A-201ENST00000257181 NRARPQ7Z6K4 114 aa11.43□□□□□ -0.58
PRPF38A-201ENST00000257181 KRBOX1C9JBD0 128 aa11.43□□□□□ -0.58
PRPF38A-201ENST00000257181 TMEM182Q6ZP80 229 aaPredicted RBP11.43□□□□□ -0.58
PRPF38A-201ENST00000257181 GAPTQ8N292 157 aa11.43□□□□□ -0.58
PRPF38A-201ENST00000257181 AKIRIN1Q9H9L7 192 aaPredicted RBP11.43□□□□□ -0.58
PRPF38A-201ENST00000257181 YTHDF2Q9Y5A9 579 aaKnown RBP11.43□□□□□ -0.58
PRPF38A-201ENST00000257181 DBX1A6NMT0 343 aa11.43□□□□□ -0.58
PRPF38A-201ENST00000257181 INHBBP09529 407 aa11.43□□□□□ -0.58
PRPF38A-201ENST00000257181 C3orf56Q8N813 242 aa11.43□□□□□ -0.58
PRPF38A-201ENST00000257181 MOB4Q9Y3A3 225 aa11.43□□□□□ -0.58
PRPF38A-201ENST00000257181 TMEM56-RWDD3S4R434 201 aa11.43□□□□□ -0.58
PRPF38A-201ENST00000257181 TRBV5-7A0A0A0MS05 114 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 HLA-GP17693 338 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 CDC34P49427 236 aaPredicted RBP11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 TPPP2P59282 170 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 A8MV72 311 aaPredicted RBP11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 NPPCP23582 126 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 SNRPNP63162 240 aaKnown RBP11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 FXYD3Q14802 87 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 PIGYQ3MUY2 71 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 Q5PR19 223 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 C19orf35Q6ZS72 473 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 GTSCR1Q86UQ5 136 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 RPS10P5Q9NQ39 176 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 CENPVL1A0A0U1RR11 272 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 NXPH3O95157 252 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 KIR2DL2P43627 348 aaPredicted RBP11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 FOXL2P58012 376 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 LY6EQ16553 131 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 FAM122BQ7Z309 247 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 OR2C3Q8N628 320 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 TCRBV4S1A1TA0A5B7 111 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 EGR4Q05215 589 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 IRF3Q14653 427 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 COLCA1Q6ZS62 124 aa11.42□□□□□ -0.58
PRPF38A-201ENST00000257181 LY6G6EA0A0G2JKS1 128 aa11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 IGSF23A1L1A6 192 aa11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 C9orf170A2RU37 121 aa11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 TGFBR3LH3BV60 316 aa11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 RPS20P60866 119 aaKnown RBP11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 HSPE1P61604 102 aaKnown RBP11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 TM4SF20Q53R12 229 aa11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 PPP1R27Q86WC6 154 aa11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 MRPL37Q9BZE1 423 aaKnown RBP11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 SIRT7Q9NRC8 400 aa11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 U3KQA8 63 aa11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 OR4P4Q8NGL7 312 aa11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 RNF166Q96A37 237 aaPredicted RBP11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 TOLLIPQ9H0E2 274 aa11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 POMT1Q9Y6A1 747 aa11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 DOCK6Q96HP0 2047 aa11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 BCL2L11O43521 198 aa11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 ZNF205O95201 554 aa11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 TRGV3P03979 118 aa11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 ZNF362Q5T0B9 420 aaPredicted RBP11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 SAMD10Q9BYL1 202 aa11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 OR5AC1P0C628 307 aa11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 PRSS54Q6PEW0 395 aa11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 IGFL2Q6UWQ7 119 aa11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 ZNF430Q9H8G1 570 aaPredicted RBP11.41□□□□□ -0.58
PRPF38A-201ENST00000257181 F12P00748 615 aaPredicted RBP11.4□□□□□ -0.58
PRPF38A-201ENST00000257181 SULT1A1P50225 295 aa11.4□□□□□ -0.58
PRPF38A-201ENST00000257181 KLF9Q13886 244 aaPredicted RBP11.4□□□□□ -0.58
PRPF38A-201ENST00000257181 TMEM78Q5T7P6 136 aa11.4□□□□□ -0.58
PRPF38A-201ENST00000257181 SLC25A33Q9BSK2 321 aa11.4□□□□□ -0.58
PRPF38A-201ENST00000257181 NPVFQ9HCQ7 196 aa11.4□□□□□ -0.58
PRPF38A-201ENST00000257181 UBE2L3P68036 154 aaKnown RBP11.4□□□□□ -0.58
PRPF38A-201ENST00000257181 EFNB3Q15768 340 aa11.4□□□□□ -0.58
PRPF38A-201ENST00000257181 LGALSLQ3ZCW2 172 aaPredicted RBP11.4□□□□□ -0.58
PRPF38A-201ENST00000257181 FAM71F2Q6NXP2 309 aa11.4□□□□□ -0.58
PRPF38A-201ENST00000257181 MARC2Q969Z3 335 aa11.4□□□□□ -0.58
PRPF38A-201ENST00000257181 Q96M66 194 aa11.4□□□□□ -0.58
PRPF38A-201ENST00000257181 TMEM133Q9H2Q1 129 aa11.4□□□□□ -0.58
PRPF38A-201ENST00000257181 TRIOBPQ9H2D6 2365 aa11.4□□□□□ -0.58
PRPF38A-201ENST00000257181 MITD1Q8WV92 249 aa11.4□□□□□ -0.58
PRPF38A-201ENST00000257181 RBM14Q96PK6 669 aaKnown RBP11.4□□□□□ -0.58
PRPF38A-201ENST00000257181 SRRQ9GZT4 340 aa11.4□□□□□ -0.58
PRPF38A-201ENST00000257181 CCL28Q9NRJ3 127 aa11.4□□□□□ -0.58
PRPF38A-201ENST00000257181 CDC42EP3Q9UKI2 254 aa11.4□□□□□ -0.58
PRPF38A-201ENST00000257181 SOCS1O15524 211 aa11.4□□□□□ -0.59
PRPF38A-201ENST00000257181 Q0VFX4 171 aa11.4□□□□□ -0.59
PRPF38A-201ENST00000257181 MOGAT2Q3SYC2 334 aa11.4□□□□□ -0.59
PRPF38A-201ENST00000257181 CCDC190Q86UF4 302 aa11.4□□□□□ -0.59
PRPF38A-201ENST00000257181 BAP18Q8IXM2 172 aa11.4□□□□□ -0.59
PRPF38A-201ENST00000257181 OR4X1Q8NH49 305 aa11.4□□□□□ -0.59
PRPF38A-201ENST00000257181 TMEM18Q96B42 140 aa11.4□□□□□ -0.59
PRPF38A-201ENST00000257181 C16orf92Q96LL3 132 aa11.4□□□□□ -0.59
PRPF38A-201ENST00000257181 TCEAL7Q9BRU2 100 aa11.4□□□□□ -0.59
PRPF38A-201ENST00000257181 SIGLEC5O15389 551 aa11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 APOC3P02656 99 aa11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 PGA5P0DJD9 388 aa11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 PSG7Q13046 419 aa11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 FCN2Q15485 313 aa11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 OTPQ5XKR4 325 aa11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 GGNQ86UU5 652 aa11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 SLC2A9Q9NRM0 540 aa11.39□□□□□ -0.59
PRPF38A-201ENST00000257181 ANKRD36A6QL64 1941 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms